RNA–Protein interactions for RNA: ENST00000409497.5

SCRN1-202, Transcript of secernin 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCRN1, Length 1,732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-202ENST00000409497 CD109Q6YHK3 1445 aa10.09□□□□□ -0.79
SCRN1-202ENST00000409497 SUPT6HQ7KZ85 1726 aaKnown RBP10.09□□□□□ -0.79
SCRN1-202ENST00000409497 COL17A1Q9UMD9 1497 aaPredicted RBP10.08□□□□□ -0.8
SCRN1-202ENST00000409497 MYOM3Q5VTT5 1437 aa10.07□□□□□ -0.8
SCRN1-202ENST00000409497 FGD6Q6ZV73 1430 aa10.07□□□□□ -0.8
SCRN1-202ENST00000409497 ADGRL1O94910 1474 aa10.07□□□□□ -0.8
SCRN1-202ENST00000409497 FAM50AQ14320 339 aaKnown RBP10.07□□□□□ -0.8
SCRN1-202ENST00000409497 ITGAEP38570 1179 aa10.05□□□□□ -0.8
SCRN1-202ENST00000409497 KIF14Q15058 1648 aa10.04□□□□□ -0.8
SCRN1-202ENST00000409497 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.03□□□□□ -0.8
SCRN1-202ENST00000409497 MIA2Q96PC5 1412 aa10.03□□□□□ -0.8
SCRN1-202ENST00000409497 SENP3Q9H4L4 574 aaPredicted RBP10.02□□□□□ -0.8
SCRN1-202ENST00000409497 GPATCH8Q9UKJ3 1502 aaKnown RBP10.02□□□□□ -0.81
SCRN1-202ENST00000409497 CFDP1Q9UEE9 299 aaPredicted RBP10□□□□□ -0.81
SCRN1-202ENST00000409497 TCOF1Q13428 1488 aaKnown RBP10□□□□□ -0.81
SCRN1-202ENST00000409497 PTPN23Q9H3S7 1636 aa10□□□□□ -0.81
SCRN1-202ENST00000409497 ARAP3Q8WWN8 1544 aa9.99□□□□□ -0.81
SCRN1-202ENST00000409497 ZNF644Q9H582 1327 aaPredicted RBP9.99□□□□□ -0.81
SCRN1-202ENST00000409497 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.97□□□□□ -0.81
SCRN1-202ENST00000409497 PTPRKQ15262 1439 aa9.97□□□□□ -0.81
SCRN1-202ENST00000409497 BCL11AQ9H165 835 aa9.97□□□□□ -0.81
SCRN1-202ENST00000409497 ZNF777Q9ULD5 760 aaPredicted RBP9.97□□□□□ -0.81
SCRN1-202ENST00000409497 ABCA9Q8IUA7 1624 aa9.96□□□□□ -0.82
SCRN1-202ENST00000409497 TTC37Q6PGP7 1564 aa9.96□□□□□ -0.82
SCRN1-202ENST00000409497 CAMSAP2Q08AD1 1489 aa9.95□□□□□ -0.82
SCRN1-202ENST00000409497 NEO1Q92859 1461 aa9.95□□□□□ -0.82
SCRN1-202ENST00000409497 ITSN2Q9NZM3 1697 aa9.95□□□□□ -0.82
SCRN1-202ENST00000409497 RAPGEF3O95398 923 aa9.94□□□□□ -0.82
SCRN1-202ENST00000409497 CDC42BPAQ5VT25 1732 aa9.94□□□□□ -0.82
SCRN1-202ENST00000409497 ARID4BQ4LE39 1312 aaPredicted RBP9.94□□□□□ -0.82
SCRN1-202ENST00000409497 ILDR1Q86SU0 546 aaPredicted RBP9.93□□□□□ -0.82
SCRN1-202ENST00000409497 CHIC2Q9UKJ5 165 aa9.93□□□□□ -0.82
SCRN1-202ENST00000409497 HECW2Q9P2P5 1572 aa9.93□□□□□ -0.82
SCRN1-202ENST00000409497 ABCC5O15440 1437 aa9.93□□□□□ -0.82
SCRN1-202ENST00000409497 HRCP23327 699 aa9.93□□□□□ -0.82
SCRN1-202ENST00000409497 DAPK1P53355 1430 aa9.93□□□□□ -0.82
SCRN1-202ENST00000409497 CCER1Q8TC90 406 aaPredicted RBP9.93□□□□□ -0.82
SCRN1-202ENST00000409497 PLCH2O75038 1416 aa9.92□□□□□ -0.82
SCRN1-202ENST00000409497 ARHGAP5Q13017 1502 aa9.92□□□□□ -0.82
SCRN1-202ENST00000409497 RAB3GAP2Q9H2M9 1393 aa9.92□□□□□ -0.82
SCRN1-202ENST00000409497 PREX2Q70Z35 1606 aa9.92□□□□□ -0.82
SCRN1-202ENST00000409497 SETD5Q9C0A6 1442 aa9.91□□□□□ -0.82
SCRN1-202ENST00000409497 HNRNPMP52272 730 aaKnown RBP eCLIP9.9□□□□□ -0.82
SCRN1-202ENST00000409497 HFM1A2PYH4 1435 aa9.9□□□□□ -0.82
SCRN1-202ENST00000409497 EIF5BO60841 1220 aaKnown RBP9.9□□□□□ -0.83
SCRN1-202ENST00000409497 EFCAB2Q5VUJ9 269 aa9.9□□□□□ -0.83
SCRN1-202ENST00000409497 RRP7BPQ9NSQ0 103 aa9.9□□□□□ -0.83
SCRN1-202ENST00000409497 CDC42BPBQ9Y5S2 1711 aa9.89□□□□□ -0.83
SCRN1-202ENST00000409497 DNMT1P26358 1616 aaKnown RBP9.89□□□□□ -0.83
SCRN1-202ENST00000409497 NAIPQ13075 1403 aa9.89□□□□□ -0.83
SCRN1-202ENST00000409497 SAMD9LQ8IVG5 1584 aa9.89□□□□□ -0.83
SCRN1-202ENST00000409497 DENND4BO75064 1496 aaPredicted RBP9.89□□□□□ -0.83
SCRN1-202ENST00000409497 MBD5Q9P267 1494 aa9.89□□□□□ -0.83
SCRN1-202ENST00000409497 MYO5CQ9NQX4 1742 aa9.88□□□□□ -0.83
SCRN1-202ENST00000409497 AKNAQ7Z591 1439 aa9.88□□□□□ -0.83
SCRN1-202ENST00000409497 CFAP74Q9C0B2 1584 aa9.87□□□□□ -0.83
SCRN1-202ENST00000409497 FANCAO15360 1455 aa9.87□□□□□ -0.83
SCRN1-202ENST00000409497 ROCK1Q13464 1354 aa9.87□□□□□ -0.83
SCRN1-202ENST00000409497 PTPRMP28827 1452 aa9.86□□□□□ -0.83
SCRN1-202ENST00000409497 SYCP2Q9BX26 1530 aa9.86□□□□□ -0.83
SCRN1-202ENST00000409497 DHX57Q6P158 1386 aaKnown RBP9.86□□□□□ -0.83
SCRN1-202ENST00000409497 POGZQ7Z3K3 1410 aa9.86□□□□□ -0.83
SCRN1-202ENST00000409497 KIAA1107Q9UPP5 1409 aa9.86□□□□□ -0.83
SCRN1-202ENST00000409497 TSPY4P0CV99 314 aa9.86□□□□□ -0.83
SCRN1-202ENST00000409497 TSPY10P0CW01 314 aa9.86□□□□□ -0.83
SCRN1-202ENST00000409497 RSPH4AQ5TD94 716 aa9.86□□□□□ -0.83
SCRN1-202ENST00000409497 C9orf84Q5VXU9 1444 aa9.85□□□□□ -0.83
SCRN1-202ENST00000409497 CCDC141Q6ZP82 1450 aa9.85□□□□□ -0.83
SCRN1-202ENST00000409497 PLEKHH2Q8IVE3 1493 aa9.85□□□□□ -0.83
SCRN1-202ENST00000409497 ADAMTSL3P82987 1691 aa9.85□□□□□ -0.83
SCRN1-202ENST00000409497 ARHGEF12Q9NZN5 1544 aa9.85□□□□□ -0.83
SCRN1-202ENST00000409497 ARHGEF5Q12774 1597 aa9.85□□□□□ -0.83
SCRN1-202ENST00000409497 NCOA1Q15788 1441 aa9.85□□□□□ -0.83
SCRN1-202ENST00000409497 SHANK2Q9UPX8 1470 aa9.85□□□□□ -0.83
SCRN1-202ENST00000409497 ADGRL2O95490 1459 aa9.84□□□□□ -0.83
SCRN1-202ENST00000409497 ZEB1P37275 1124 aaPredicted RBP9.84□□□□□ -0.83
SCRN1-202ENST00000409497 BCORL1Q5H9F3 1711 aa9.83□□□□□ -0.84
SCRN1-202ENST00000409497 ABCC1P33527 1531 aa9.83□□□□□ -0.84
SCRN1-202ENST00000409497 FRMPD1Q5SYB0 1578 aa9.83□□□□□ -0.84
SCRN1-202ENST00000409497 ANKRD30AQ9BXX3 1397 aa9.83□□□□□ -0.84
SCRN1-202ENST00000409497 TRAPPC8Q9Y2L5 1435 aa9.83□□□□□ -0.84
SCRN1-202ENST00000409497 MAGI2Q86UL8 1455 aa9.83□□□□□ -0.84
SCRN1-202ENST00000409497 CROCC2H7BZ55 1655 aa9.82□□□□□ -0.84
SCRN1-202ENST00000409497 ARHGEF40Q8TER5 1519 aa9.82□□□□□ -0.84
SCRN1-202ENST00000409497 RICTORQ6R327 1708 aa9.82□□□□□ -0.84
SCRN1-202ENST00000409497 SCAPERQ9BY12 1400 aa9.81□□□□□ -0.84
SCRN1-202ENST00000409497 NCBP3Q53F19 620 aaKnown RBP9.81□□□□□ -0.84
SCRN1-202ENST00000409497 PLPPR3Q6T4P5 718 aa9.81□□□□□ -0.84
SCRN1-202ENST00000409497 AFAP1Q8N556 730 aa9.81□□□□□ -0.84
SCRN1-202ENST00000409497 MYT1LQ9UL68 1186 aa9.81□□□□□ -0.84
SCRN1-202ENST00000409497 ZFYVE16Q7Z3T8 1539 aa9.81□□□□□ -0.84
SCRN1-202ENST00000409497 GCC2Q8IWJ2 1684 aa9.81□□□□□ -0.84
SCRN1-202ENST00000409497 MLECQ14165 292 aa9.8□□□□□ -0.84
SCRN1-202ENST00000409497 MADDQ8WXG6 1647 aa9.8□□□□□ -0.84
SCRN1-202ENST00000409497 KIF15Q9NS87 1388 aa9.8□□□□□ -0.84
SCRN1-202ENST00000409497 ZMYM4Q5VZL5 1548 aa9.79□□□□□ -0.84
SCRN1-202ENST00000409497 FBXO41Q8TF61 875 aa9.79□□□□□ -0.84
SCRN1-202ENST00000409497 ANKRD50Q9ULJ7 1429 aa9.79□□□□□ -0.84
SCRN1-202ENST00000409497 CLSPNQ9HAW4 1339 aa9.79□□□□□ -0.84
SCRN1-202ENST00000409497 CENPBP07199 599 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms