RNA–Protein interactions for RNA: ENST00000409473.2

PPM1B-206, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 5

Gene PPM1B, Length 923 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-206ENST00000409473 SCUBE2Q9NQ36 999 aa13.11□□□□□ -0.31
PPM1B-206ENST00000409473 NBR1Q14596 966 aa13.08□□□□□ -0.32
PPM1B-206ENST00000409473 TMEM92Q6UXU6 159 aa13.08□□□□□ -0.32
PPM1B-206ENST00000409473 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.05□□□□□ -0.32
PPM1B-206ENST00000409473 C3orf67Q6ZVT6 689 aa13.04□□□□□ -0.32
PPM1B-206ENST00000409473 G3V3G9 751 aa13.02□□□□□ -0.33
PPM1B-206ENST00000409473 PRKCSHP14314 528 aaPredicted RBP13.01□□□□□ -0.33
PPM1B-206ENST00000409473 SLAIN1Q8ND83 568 aa13.01□□□□□ -0.33
PPM1B-206ENST00000409473 KIF3CO14782 793 aa12.99□□□□□ -0.33
PPM1B-206ENST00000409473 TPRNQ4KMQ1 711 aa12.98□□□□□ -0.33
PPM1B-206ENST00000409473 CADPS2Q86UW7 1296 aa12.96□□□□□ -0.33
PPM1B-206ENST00000409473 P3H3Q8IVL6 736 aa12.93□□□□□ -0.34
PPM1B-206ENST00000409473 C2orf72A6NCS6 295 aa12.92□□□□□ -0.34
PPM1B-206ENST00000409473 NCKAP5LQ9HCH0 1330 aa12.91□□□□□ -0.34
PPM1B-206ENST00000409473 CRISPLD2Q9H0B8 497 aa12.91□□□□□ -0.34
PPM1B-206ENST00000409473 WDR70Q9NW82 654 aa12.91□□□□□ -0.34
PPM1B-206ENST00000409473 GPHNQ9NQX3 736 aaPredicted RBP12.87□□□□□ -0.35
PPM1B-206ENST00000409473 HOXB3P14651 431 aaPredicted RBP12.86□□□□□ -0.35
PPM1B-206ENST00000409473 LCE2DQ5TA82 110 aaPredicted RBP12.86□□□□□ -0.35
PPM1B-206ENST00000409473 FOXK1P85037 733 aa12.82□□□□□ -0.36
PPM1B-206ENST00000409473 TMC2Q8TDI7 906 aa12.82□□□□□ -0.36
PPM1B-206ENST00000409473 DSG2Q14126 1118 aa12.81□□□□□ -0.36
PPM1B-206ENST00000409473 KCNV2Q8TDN2 545 aa12.81□□□□□ -0.36
PPM1B-206ENST00000409473 MFSD10Q14728 455 aa12.8□□□□□ -0.36
PPM1B-206ENST00000409473 PDE4AP27815 886 aa12.77□□□□□ -0.37
PPM1B-206ENST00000409473 LARP6Q9BRS8 491 aaKnown RBP12.75□□□□□ -0.37
PPM1B-206ENST00000409473 SNPHO15079 494 aa12.74□□□□□ -0.37
PPM1B-206ENST00000409473 PLPP6Q8IY26 295 aa12.74□□□□□ -0.37
PPM1B-206ENST00000409473 ST18O60284 1047 aa12.73□□□□□ -0.37
PPM1B-206ENST00000409473 PPP1R15BQ5SWA1 713 aa12.73□□□□□ -0.37
PPM1B-206ENST00000409473 SLC34A2O95436 690 aa12.71□□□□□ -0.37
PPM1B-206ENST00000409473 FAM163AQ96GL9 167 aaPredicted RBP12.71□□□□□ -0.37
PPM1B-206ENST00000409473 DDX27Q96GQ7 796 aaKnown RBP12.71□□□□□ -0.37
PPM1B-206ENST00000409473 E2F4Q16254 413 aa12.7□□□□□ -0.38
PPM1B-206ENST00000409473 DOK7Q18PE1 504 aa12.7□□□□□ -0.38
PPM1B-206ENST00000409473 GPR153Q6NV75 609 aa12.68□□□□□ -0.38
PPM1B-206ENST00000409473 ARHGEF1Q92888 912 aaKnown RBP12.67□□□□□ -0.38
PPM1B-206ENST00000409473 CAMK2BQ13554 666 aa12.65□□□□□ -0.38
PPM1B-206ENST00000409473 PTCD2Q8WV60 388 aaKnown RBP12.65□□□□□ -0.38
PPM1B-206ENST00000409473 ZSWIM6Q9HCJ5 1215 aa12.65□□□□□ -0.38
PPM1B-206ENST00000409473 HOXB1P14653 301 aaPredicted RBP12.63□□□□□ -0.39
PPM1B-206ENST00000409473 OXER1Q8TDS5 423 aa12.63□□□□□ -0.39
PPM1B-206ENST00000409473 EMILIN3Q9NT22 766 aa12.63□□□□□ -0.39
PPM1B-206ENST00000409473 KDM4FA0A1W2PPD8 638 aa12.62□□□□□ -0.39
PPM1B-206ENST00000409473 KHSRPQ92945 711 aaKnown RBP eCLIP12.61□□□□□ -0.39
PPM1B-206ENST00000409473 PCDHGA4Q9Y5G9 962 aa12.61□□□□□ -0.39
PPM1B-206ENST00000409473 TULP1O00294 542 aaPredicted RBP12.6□□□□□ -0.39
PPM1B-206ENST00000409473 ARSIQ5FYB1 569 aa12.6□□□□□ -0.39
PPM1B-206ENST00000409473 ZNF710Q8N1W2 664 aa12.6□□□□□ -0.39
PPM1B-206ENST00000409473 RIMBP2O15034 1052 aa12.59□□□□□ -0.39
PPM1B-206ENST00000409473 LMOD2Q6P5Q4 547 aa12.58□□□□□ -0.4
PPM1B-206ENST00000409473 MARVELD3Q96A59 401 aa12.57□□□□□ -0.4
PPM1B-206ENST00000409473 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.56□□□□□ -0.4
PPM1B-206ENST00000409473 UPF1Q92900 1129 aaKnown RBP eCLIP12.54□□□□□ -0.4
PPM1B-206ENST00000409473 POTEB3A0JP26 581 aa12.53□□□□□ -0.4
PPM1B-206ENST00000409473 POTEBQ6S5H4 581 aa12.53□□□□□ -0.4
PPM1B-206ENST00000409473 POTEMA6NI47 508 aa12.52□□□□□ -0.41
PPM1B-206ENST00000409473 NUDT7P0C024 238 aa12.52□□□□□ -0.41
PPM1B-206ENST00000409473 POTEGQ6S5H5 508 aa12.52□□□□□ -0.41
PPM1B-206ENST00000409473 SEMA3EO15041 775 aa12.51□□□□□ -0.41
PPM1B-206ENST00000409473 ARIH1Q9Y4X5 557 aaPredicted RBP12.51□□□□□ -0.41
PPM1B-206ENST00000409473 TESPA1A2RU30 521 aaPredicted RBP12.5□□□□□ -0.41
PPM1B-206ENST00000409473 EMP3P54852 163 aa12.49□□□□□ -0.41
PPM1B-206ENST00000409473 DPYSL4O14531 572 aa12.46□□□□□ -0.41
PPM1B-206ENST00000409473 ANO8Q9HCE9 1232 aaPredicted RBP12.46□□□□□ -0.41
PPM1B-206ENST00000409473 TBC1D12O60347 775 aa12.45□□□□□ -0.42
PPM1B-206ENST00000409473 ZNF316A6NFI3 1004 aaPredicted RBP12.44□□□□□ -0.42
PPM1B-206ENST00000409473 SMYD5Q6GMV2 418 aa12.44□□□□□ -0.42
PPM1B-206ENST00000409473 HS3ST6Q96QI5 342 aa12.44□□□□□ -0.42
PPM1B-206ENST00000409473 LHX6Q9UPM6 363 aa12.44□□□□□ -0.42
PPM1B-206ENST00000409473 FAM205CA6NFA0 338 aa12.43□□□□□ -0.42
PPM1B-206ENST00000409473 EVI5O60447 810 aa12.42□□□□□ -0.42
PPM1B-206ENST00000409473 MAP3K9P80192 1104 aa12.42□□□□□ -0.42
PPM1B-206ENST00000409473 PDIA6Q15084 440 aa12.4□□□□□ -0.42
PPM1B-206ENST00000409473 ERBB3P21860 1342 aa12.39□□□□□ -0.43
PPM1B-206ENST00000409473 VARS2Q5ST30 1063 aaKnown RBP12.39□□□□□ -0.43
PPM1B-206ENST00000409473 ZC3H15Q8WU90 426 aaKnown RBP12.37□□□□□ -0.43
PPM1B-206ENST00000409473 FOSBP53539 338 aa12.34□□□□□ -0.43
PPM1B-206ENST00000409473 PTGER2P43116 358 aa12.33□□□□□ -0.44
PPM1B-206ENST00000409473 POTEEQ6S8J3 1075 aa12.33□□□□□ -0.44
PPM1B-206ENST00000409473 SPDYE16A6NNV3 312 aaPredicted RBP12.32□□□□□ -0.44
PPM1B-206ENST00000409473 CDAN1Q8IWY9 1227 aa12.32□□□□□ -0.44
PPM1B-206ENST00000409473 ZNF687Q8N1G0 1237 aa12.32□□□□□ -0.44
PPM1B-206ENST00000409473 KRTAP3-3Q9BYR6 98 aa12.31□□□□□ -0.44
PPM1B-206ENST00000409473 KRTAP3-2Q9BYR7 98 aa12.31□□□□□ -0.44
PPM1B-206ENST00000409473 JPH4Q96JJ6 628 aa12.3□□□□□ -0.44
PPM1B-206ENST00000409473 PSDA5PKW4 1024 aaPredicted RBP12.29□□□□□ -0.44
PPM1B-206ENST00000409473 MLLT3P42568 568 aaPredicted RBP12.29□□□□□ -0.44
PPM1B-206ENST00000409473 PCDHGA10Q9Y5H3 936 aa12.29□□□□□ -0.44
PPM1B-206ENST00000409473 ZNF454Q8N9F8 522 aa12.26□□□□□ -0.45
PPM1B-206ENST00000409473 PHF14O94880 888 aa12.25□□□□□ -0.45
PPM1B-206ENST00000409473 PCDH10Q9P2E7 1040 aa12.25□□□□□ -0.45
PPM1B-206ENST00000409473 ZMYND10O75800 440 aa12.24□□□□□ -0.45
PPM1B-206ENST00000409473 PPP4R3BQ5MIZ7 849 aa12.24□□□□□ -0.45
PPM1B-206ENST00000409473 DDX12PQ92771 950 aa12.24□□□□□ -0.45
PPM1B-206ENST00000409473 PRIM1P49642 420 aaKnown RBP12.23□□□□□ -0.45
PPM1B-206ENST00000409473 RBM26Q5T8P6 1007 aaKnown RBP12.23□□□□□ -0.45
PPM1B-206ENST00000409473 GPIHBP1Q8IV16 184 aa12.23□□□□□ -0.45
PPM1B-206ENST00000409473 SLC24A3Q9HC58 644 aa12.23□□□□□ -0.45
PPM1B-206ENST00000409473 ADAM33Q9BZ11 813 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms