RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 TSPOAP1O95153 1857 aa20.16■□□□□ 0.82
LIMS2-203ENST00000409254 PHLDB1Q86UU1 1377 aa20.15■□□□□ 0.82
LIMS2-203ENST00000409254 ARHGAP5Q13017 1502 aa20.13■□□□□ 0.81
LIMS2-203ENST00000409254 PLEKHH2Q8IVE3 1493 aa20.13■□□□□ 0.81
LIMS2-203ENST00000409254 KCNH8Q96L42 1107 aa20.13■□□□□ 0.81
LIMS2-203ENST00000409254 FGD6Q6ZV73 1430 aa20.12■□□□□ 0.81
LIMS2-203ENST00000409254 PTPN23Q9H3S7 1636 aa20.12■□□□□ 0.81
LIMS2-203ENST00000409254 TCOF1Q13428 1488 aaKnown RBP20.11■□□□□ 0.81
LIMS2-203ENST00000409254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.11■□□□□ 0.81
LIMS2-203ENST00000409254 FAM69CQ0P6D2 419 aa20.11■□□□□ 0.81
LIMS2-203ENST00000409254 FANCAO15360 1455 aa20.11■□□□□ 0.81
LIMS2-203ENST00000409254 RRBP1Q9P2E9 1410 aaKnown RBP20.1■□□□□ 0.81
LIMS2-203ENST00000409254 SAMD9LQ8IVG5 1584 aa20.09■□□□□ 0.81
LIMS2-203ENST00000409254 ABCC1P33527 1531 aa20.09■□□□□ 0.81
LIMS2-203ENST00000409254 ARHGEF5Q12774 1597 aa20.07■□□□□ 0.8
LIMS2-203ENST00000409254 KIAA1107Q9UPP5 1409 aa20.06■□□□□ 0.8
LIMS2-203ENST00000409254 CAMSAP2Q08AD1 1489 aa20.05■□□□□ 0.8
LIMS2-203ENST00000409254 CROCC2H7BZ55 1655 aa20.05■□□□□ 0.8
LIMS2-203ENST00000409254 EFCAB2Q5VUJ9 269 aa20.04■□□□□ 0.8
LIMS2-203ENST00000409254 CFDP1Q9UEE9 299 aaPredicted RBP20.03■□□□□ 0.8
LIMS2-203ENST00000409254 DNMT1P26358 1616 aaKnown RBP20.02■□□□□ 0.8
LIMS2-203ENST00000409254 RICTORQ6R327 1708 aa20.02■□□□□ 0.8
LIMS2-203ENST00000409254 AKNAQ7Z591 1439 aa20.01■□□□□ 0.79
LIMS2-203ENST00000409254 ADGRL1O94910 1474 aa20■□□□□ 0.79
LIMS2-203ENST00000409254 SYCP2Q9BX26 1530 aa19.99■□□□□ 0.79
LIMS2-203ENST00000409254 KDM5CP41229 1560 aa19.98■□□□□ 0.79
LIMS2-203ENST00000409254 ZNF518AQ6AHZ1 1483 aa19.98■□□□□ 0.79
LIMS2-203ENST00000409254 SHANK2Q9UPX8 1470 aa19.98■□□□□ 0.79
LIMS2-203ENST00000409254 MAST1Q9Y2H9 1570 aa19.97■□□□□ 0.79
LIMS2-203ENST00000409254 ZMYM4Q5VZL5 1548 aa19.97■□□□□ 0.79
LIMS2-203ENST00000409254 RSPH4AQ5TD94 716 aa19.96■□□□□ 0.79
LIMS2-203ENST00000409254 CCDC141Q6ZP82 1450 aa19.96■□□□□ 0.79
LIMS2-203ENST00000409254 MBD5Q9P267 1494 aa19.96■□□□□ 0.79
LIMS2-203ENST00000409254 ADGBQ8N7X0 1667 aa19.96■□□□□ 0.79
LIMS2-203ENST00000409254 POGZQ7Z3K3 1410 aa19.94■□□□□ 0.78
LIMS2-203ENST00000409254 DENND4BO75064 1496 aaPredicted RBP19.92■□□□□ 0.78
LIMS2-203ENST00000409254 FRMPD1Q5SYB0 1578 aa19.92■□□□□ 0.78
LIMS2-203ENST00000409254 INO80Q9ULG1 1556 aaPredicted RBP19.92■□□□□ 0.78
LIMS2-203ENST00000409254 KDM6BO15054 1643 aa19.92■□□□□ 0.78
LIMS2-203ENST00000409254 AEBP2Q6ZN18 517 aaPredicted RBP19.92■□□□□ 0.78
LIMS2-203ENST00000409254 PPARGC1BQ86YN6 1023 aaKnown RBP19.92■□□□□ 0.78
LIMS2-203ENST00000409254 SCAPERQ9BY12 1400 aa19.91■□□□□ 0.78
LIMS2-203ENST00000409254 ARHGEF12Q9NZN5 1544 aa19.91■□□□□ 0.78
LIMS2-203ENST00000409254 PLXNC1O60486 1568 aa19.91■□□□□ 0.78
LIMS2-203ENST00000409254 HECW2Q9P2P5 1572 aa19.91■□□□□ 0.78
LIMS2-203ENST00000409254 DAPK1P53355 1430 aa19.89■□□□□ 0.77
LIMS2-203ENST00000409254 MAGI2Q86UL8 1455 aa19.89■□□□□ 0.77
LIMS2-203ENST00000409254 RTEL1-TNFRSF6BF6WH68 1400 aa19.87■□□□□ 0.77
LIMS2-203ENST00000409254 ZFYVE16Q7Z3T8 1539 aa19.86■□□□□ 0.77
LIMS2-203ENST00000409254 ADGRL2O95490 1459 aa19.86■□□□□ 0.77
LIMS2-203ENST00000409254 MLH3Q9UHC1 1453 aa19.86■□□□□ 0.77
LIMS2-203ENST00000409254 KIDINS220Q9ULH0 1771 aa19.85■□□□□ 0.77
LIMS2-203ENST00000409254 ABCC5O15440 1437 aa19.85■□□□□ 0.77
LIMS2-203ENST00000409254 ZNF644Q9H582 1327 aaPredicted RBP19.84■□□□□ 0.77
LIMS2-203ENST00000409254 ZNF777Q9ULD5 760 aaPredicted RBP19.84■□□□□ 0.77
LIMS2-203ENST00000409254 ATP7AQ04656 1500 aa19.84■□□□□ 0.77
LIMS2-203ENST00000409254 TRAPPC8Q9Y2L5 1435 aa19.84■□□□□ 0.77
LIMS2-203ENST00000409254 ARHGEF40Q8TER5 1519 aa19.82■□□□□ 0.76
LIMS2-203ENST00000409254 GCC2Q8IWJ2 1684 aa19.82■□□□□ 0.76
LIMS2-203ENST00000409254 C9orf84Q5VXU9 1444 aa19.82■□□□□ 0.76
LIMS2-203ENST00000409254 REREQ9P2R6 1566 aa19.82■□□□□ 0.76
LIMS2-203ENST00000409254 ROCK1Q13464 1354 aa19.82■□□□□ 0.76
LIMS2-203ENST00000409254 FAM50AQ14320 339 aaKnown RBP19.8■□□□□ 0.76
LIMS2-203ENST00000409254 BCORL1Q5H9F3 1711 aa19.79■□□□□ 0.76
LIMS2-203ENST00000409254 COL17A1Q9UMD9 1497 aaPredicted RBP19.79■□□□□ 0.76
LIMS2-203ENST00000409254 TRIM26Q12899 539 aaPredicted RBP19.78■□□□□ 0.76
LIMS2-203ENST00000409254 ABCA6Q8N139 1617 aa19.77■□□□□ 0.76
LIMS2-203ENST00000409254 TSPY4P0CV99 314 aa19.77■□□□□ 0.76
LIMS2-203ENST00000409254 TSPY10P0CW01 314 aa19.77■□□□□ 0.76
LIMS2-203ENST00000409254 HNRNPMP52272 730 aaKnown RBP eCLIP19.77■□□□□ 0.76
LIMS2-203ENST00000409254 EIF2AK4Q9P2K8 1649 aaKnown RBP19.76■□□□□ 0.75
LIMS2-203ENST00000409254 DIP2CQ9Y2E4 1556 aa19.76■□□□□ 0.75
LIMS2-203ENST00000409254 SPAG9O60271 1321 aaKnown RBP19.75■□□□□ 0.75
LIMS2-203ENST00000409254 ANKRD30AQ9BXX3 1397 aa19.74■□□□□ 0.75
LIMS2-203ENST00000409254 DUOX2Q9NRD8 1548 aa19.74■□□□□ 0.75
LIMS2-203ENST00000409254 NCOA1Q15788 1441 aa19.74■□□□□ 0.75
LIMS2-203ENST00000409254 PTPRKQ15262 1439 aa19.73■□□□□ 0.75
LIMS2-203ENST00000409254 HFM1A2PYH4 1435 aa19.72■□□□□ 0.75
LIMS2-203ENST00000409254 AFAP1Q8N556 730 aa19.7■□□□□ 0.74
LIMS2-203ENST00000409254 ERBINQ96RT1 1412 aa19.69■□□□□ 0.74
LIMS2-203ENST00000409254 RAPGEF3O95398 923 aa19.69■□□□□ 0.74
LIMS2-203ENST00000409254 AGLP35573 1532 aa19.68■□□□□ 0.74
LIMS2-203ENST00000409254 ACIN1Q9UKV3 1341 aaKnown RBP19.68■□□□□ 0.74
LIMS2-203ENST00000409254 KIF15Q9NS87 1388 aa19.67■□□□□ 0.74
LIMS2-203ENST00000409254 ATP10AO60312 1499 aa19.67■□□□□ 0.74
LIMS2-203ENST00000409254 DEPDC5O75140 1603 aa19.66■□□□□ 0.74
LIMS2-203ENST00000409254 FAM135AQ9P2D6 1515 aa19.66■□□□□ 0.74
LIMS2-203ENST00000409254 RNF17Q9BXT8 1623 aaKnown RBP19.65■□□□□ 0.74
LIMS2-203ENST00000409254 NAIPQ13075 1403 aa19.65■□□□□ 0.74
LIMS2-203ENST00000409254 A2MP01023 1474 aa19.65■□□□□ 0.74
LIMS2-203ENST00000409254 YEATS2Q9ULM3 1422 aa19.63■□□□□ 0.73
LIMS2-203ENST00000409254 UNC13BO14795 1591 aa19.61■□□□□ 0.73
LIMS2-203ENST00000409254 DHX29Q7Z478 1369 aaKnown RBP19.61■□□□□ 0.73
LIMS2-203ENST00000409254 ANKRD50Q9ULJ7 1429 aa19.6■□□□□ 0.73
LIMS2-203ENST00000409254 PRDM15P57071 1507 aaPredicted RBP19.59■□□□□ 0.73
LIMS2-203ENST00000409254 ZC3H13Q5T200 1668 aaKnown RBP19.59■□□□□ 0.73
LIMS2-203ENST00000409254 HRCP23327 699 aa19.57■□□□□ 0.72
LIMS2-203ENST00000409254 SETD5Q9C0A6 1442 aa19.57■□□□□ 0.72
LIMS2-203ENST00000409254 SIGLEC1Q9BZZ2 1709 aa19.56■□□□□ 0.72
LIMS2-203ENST00000409254 ITGAEP38570 1179 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms