RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 ADGRL1O94910 1474 aa32.82■■■□□ 2.84
C4orf48-201ENST00000409248 EFCAB2Q5VUJ9 269 aa32.82■■■□□ 2.84
C4orf48-201ENST00000409248 RICTORQ6R327 1708 aa32.81■■■□□ 2.84
C4orf48-201ENST00000409248 MAP3K1Q13233 1512 aa32.79■■■□□ 2.84
C4orf48-201ENST00000409248 SUPT6HQ7KZ85 1726 aaKnown RBP32.75■■■□□ 2.83
C4orf48-201ENST00000409248 RAPGEF3O95398 923 aa32.74■■■□□ 2.83
C4orf48-201ENST00000409248 SCAPERQ9BY12 1400 aa32.73■■■□□ 2.83
C4orf48-201ENST00000409248 ITSN2Q9NZM3 1697 aa32.72■■■□□ 2.83
C4orf48-201ENST00000409248 CCNB3Q8WWL7 1395 aa32.72■■■□□ 2.83
C4orf48-201ENST00000409248 POGZQ7Z3K3 1410 aa32.72■■■□□ 2.83
C4orf48-201ENST00000409248 ZMYM4Q5VZL5 1548 aa32.72■■■□□ 2.83
C4orf48-201ENST00000409248 GPATCH8Q9UKJ3 1502 aaKnown RBP32.72■■■□□ 2.83
C4orf48-201ENST00000409248 LRRC9Q6ZRR7 1453 aa32.69■■■□□ 2.82
C4orf48-201ENST00000409248 ABCC1P33527 1531 aa32.69■■■□□ 2.82
C4orf48-201ENST00000409248 ARHGEF40Q8TER5 1519 aa32.67■■■□□ 2.82
C4orf48-201ENST00000409248 NCOA2Q15596 1464 aa32.65■■■□□ 2.82
C4orf48-201ENST00000409248 ZNF518AQ6AHZ1 1483 aa32.65■■■□□ 2.82
C4orf48-201ENST00000409248 APLP2Q06481 763 aa32.63■■■□□ 2.81
C4orf48-201ENST00000409248 SAMD9LQ8IVG5 1584 aa32.62■■■□□ 2.81
C4orf48-201ENST00000409248 MAGI2Q86UL8 1455 aa32.61■■■□□ 2.81
C4orf48-201ENST00000409248 ZFYVE16Q7Z3T8 1539 aa32.6■■■□□ 2.81
C4orf48-201ENST00000409248 KDM5CP41229 1560 aa32.59■■■□□ 2.81
C4orf48-201ENST00000409248 CFDP1Q9UEE9 299 aaPredicted RBP32.59■■■□□ 2.81
C4orf48-201ENST00000409248 PLEKHH2Q8IVE3 1493 aa32.58■■■□□ 2.81
C4orf48-201ENST00000409248 SYCP2Q9BX26 1530 aa32.55■■■□□ 2.8
C4orf48-201ENST00000409248 ZNF777Q9ULD5 760 aaPredicted RBP32.54■■■□□ 2.8
C4orf48-201ENST00000409248 HECW2Q9P2P5 1572 aa32.53■■■□□ 2.8
C4orf48-201ENST00000409248 ARHGEF12Q9NZN5 1544 aa32.52■■■□□ 2.8
C4orf48-201ENST00000409248 KIAA1107Q9UPP5 1409 aa32.51■■■□□ 2.79
C4orf48-201ENST00000409248 KANK4Q5T7N3 995 aaPredicted RBP32.5■■■□□ 2.79
C4orf48-201ENST00000409248 TRAPPC8Q9Y2L5 1435 aa32.49■■■□□ 2.79
C4orf48-201ENST00000409248 YEATS2Q9ULM3 1422 aa32.48■■■□□ 2.79
C4orf48-201ENST00000409248 AFAP1Q8N556 730 aa32.46■■■□□ 2.79
C4orf48-201ENST00000409248 MLH3Q9UHC1 1453 aa32.44■■■□□ 2.78
C4orf48-201ENST00000409248 AEBP2Q6ZN18 517 aaPredicted RBP32.44■■■□□ 2.78
C4orf48-201ENST00000409248 KDM4FA0A1W2PPD8 638 aa32.42■■■□□ 2.78
C4orf48-201ENST00000409248 CAMSAP2Q08AD1 1489 aa32.41■■■□□ 2.78
C4orf48-201ENST00000409248 MYT1LQ9UL68 1186 aa32.39■■■□□ 2.78
C4orf48-201ENST00000409248 MYOM3Q5VTT5 1437 aa32.39■■■□□ 2.78
C4orf48-201ENST00000409248 C9orf84Q5VXU9 1444 aa32.39■■■□□ 2.78
C4orf48-201ENST00000409248 ATP10AO60312 1499 aa32.39■■■□□ 2.78
C4orf48-201ENST00000409248 DIP2CQ9Y2E4 1556 aa32.38■■■□□ 2.77
C4orf48-201ENST00000409248 ABCA6Q8N139 1617 aa32.37■■■□□ 2.77
C4orf48-201ENST00000409248 HNRNPMP52272 730 aaKnown RBP eCLIP32.36■■■□□ 2.77
C4orf48-201ENST00000409248 KIDINS220Q9ULH0 1771 aa32.36■■■□□ 2.77
C4orf48-201ENST00000409248 BCORL1Q5H9F3 1711 aa32.35■■■□□ 2.77
C4orf48-201ENST00000409248 ARID4BQ4LE39 1312 aaPredicted RBP32.35■■■□□ 2.77
C4orf48-201ENST00000409248 ZNF644Q9H582 1327 aaPredicted RBP32.35■■■□□ 2.77
C4orf48-201ENST00000409248 MIA2Q96PC5 1412 aa32.34■■■□□ 2.77
C4orf48-201ENST00000409248 INO80Q9ULG1 1556 aaPredicted RBP32.34■■■□□ 2.77
C4orf48-201ENST00000409248 REREQ9P2R6 1566 aa32.33■■■□□ 2.77
C4orf48-201ENST00000409248 MBD5Q9P267 1494 aa32.33■■■□□ 2.77
C4orf48-201ENST00000409248 ATP7AQ04656 1500 aa32.32■■■□□ 2.76
C4orf48-201ENST00000409248 SIGLEC1Q9BZZ2 1709 aa32.31■■■□□ 2.76
C4orf48-201ENST00000409248 SPAG9O60271 1321 aaKnown RBP32.31■■■□□ 2.76
C4orf48-201ENST00000409248 CCDC141Q6ZP82 1450 aa32.3■■■□□ 2.76
C4orf48-201ENST00000409248 ADAMTSL3P82987 1691 aa32.3■■■□□ 2.76
C4orf48-201ENST00000409248 ARHGEF5Q12774 1597 aa32.29■■■□□ 2.76
C4orf48-201ENST00000409248 RSPH4AQ5TD94 716 aa32.23■■■□□ 2.75
C4orf48-201ENST00000409248 MADDQ8WXG6 1647 aa32.22■■■□□ 2.75
C4orf48-201ENST00000409248 PTPN23Q9H3S7 1636 aa32.22■■■□□ 2.75
C4orf48-201ENST00000409248 RTEL1-TNFRSF6BF6WH68 1400 aa32.2■■■□□ 2.75
C4orf48-201ENST00000409248 FGD6Q6ZV73 1430 aa32.2■■■□□ 2.75
C4orf48-201ENST00000409248 ADGBQ8N7X0 1667 aa32.2■■■□□ 2.74
C4orf48-201ENST00000409248 AGLP35573 1532 aa32.2■■■□□ 2.74
C4orf48-201ENST00000409248 FER1L4A9Z1Z3 1794 aa32.15■■■□□ 2.74
C4orf48-201ENST00000409248 TCOF1Q13428 1488 aaKnown RBP32.14■■■□□ 2.74
C4orf48-201ENST00000409248 PLXNC1O60486 1568 aa32.14■■■□□ 2.74
C4orf48-201ENST00000409248 RIMS1Q86UR5 1692 aaKnown RBP32.14■■■□□ 2.74
C4orf48-201ENST00000409248 MAST1Q9Y2H9 1570 aa32.12■■■□□ 2.73
C4orf48-201ENST00000409248 A2MP01023 1474 aa32.12■■■□□ 2.73
C4orf48-201ENST00000409248 CROCC2H7BZ55 1655 aa32.1■■■□□ 2.73
C4orf48-201ENST00000409248 PTPRMP28827 1452 aa32.1■■■□□ 2.73
C4orf48-201ENST00000409248 TSPY4P0CV99 314 aa32.09■■■□□ 2.73
C4orf48-201ENST00000409248 TSPY10P0CW01 314 aa32.09■■■□□ 2.73
C4orf48-201ENST00000409248 MLECQ14165 292 aa32.09■■■□□ 2.73
C4orf48-201ENST00000409248 DNMT1P26358 1616 aaKnown RBP32.06■■■□□ 2.72
C4orf48-201ENST00000409248 SHANK2Q9UPX8 1470 aa32.05■■■□□ 2.72
C4orf48-201ENST00000409248 DAPK1P53355 1430 aa32■■■□□ 2.71
C4orf48-201ENST00000409248 ABCC5O15440 1437 aa31.98■■■□□ 2.71
C4orf48-201ENST00000409248 DHX29Q7Z478 1369 aaKnown RBP31.97■■■□□ 2.71
C4orf48-201ENST00000409248 PPARGC1BQ86YN6 1023 aaKnown RBP31.96■■■□□ 2.71
C4orf48-201ENST00000409248 CNTLNQ9NXG0 1405 aa31.92■■■□□ 2.7
C4orf48-201ENST00000409248 FAM50AQ14320 339 aaKnown RBP31.92■■■□□ 2.7
C4orf48-201ENST00000409248 ESF1Q9H501 851 aaKnown RBP31.92■■■□□ 2.7
C4orf48-201ENST00000409248 EIF2AK4Q9P2K8 1649 aaKnown RBP31.89■■■□□ 2.7
C4orf48-201ENST00000409248 DUOX2Q9NRD8 1548 aa31.88■■■□□ 2.69
C4orf48-201ENST00000409248 MROH2AA6NES4 1674 aa31.88■■■□□ 2.69
C4orf48-201ENST00000409248 KIF15Q9NS87 1388 aa31.84■■■□□ 2.69
C4orf48-201ENST00000409248 FAM135AQ9P2D6 1515 aa31.84■■■□□ 2.69
C4orf48-201ENST00000409248 C3P01024 1663 aa31.83■■■□□ 2.69
C4orf48-201ENST00000409248 CLTCQ00610 1675 aaKnown RBP31.83■■■□□ 2.69
C4orf48-201ENST00000409248 ANKRD30AQ9BXX3 1397 aa31.82■■■□□ 2.69
C4orf48-201ENST00000409248 RNF17Q9BXT8 1623 aaKnown RBP31.82■■■□□ 2.68
C4orf48-201ENST00000409248 ADGRL2O95490 1459 aa31.81■■■□□ 2.68
C4orf48-201ENST00000409248 KIF3BO15066 747 aa31.81■■■□□ 2.68
C4orf48-201ENST00000409248 GGT6Q6P531 493 aa31.81■■■□□ 2.68
C4orf48-201ENST00000409248 PPP6R1Q9UPN7 881 aa31.81■■■□□ 2.68
C4orf48-201ENST00000409248 PLPPR3Q6T4P5 718 aa31.8■■■□□ 2.68
C4orf48-201ENST00000409248 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms