RNA–Protein interactions for RNA: ENST00000409136.5

SSFA2-203, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SSFA2, Length 3,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-203ENST00000409136 RAPGEF2Q9Y4G8 1499 aa12.84□□□□□ -0.35
SSFA2-203ENST00000409136 APPP05067 770 aa12.82□□□□□ -0.36
SSFA2-203ENST00000409136 VGLL3A8MV65 326 aa12.82□□□□□ -0.36
SSFA2-203ENST00000409136 CFAP44Q96MT7 982 aa12.81□□□□□ -0.36
SSFA2-203ENST00000409136 MRS2Q9HD23 443 aa12.81□□□□□ -0.36
SSFA2-203ENST00000409136 SETD5Q9C0A6 1442 aa12.81□□□□□ -0.36
SSFA2-203ENST00000409136 TONSLQ96HA7 1378 aa12.8□□□□□ -0.36
SSFA2-203ENST00000409136 CCDC184Q52MB2 194 aa12.8□□□□□ -0.36
SSFA2-203ENST00000409136 FAM50AQ14320 339 aaKnown RBP12.8□□□□□ -0.36
SSFA2-203ENST00000409136 ZHX1Q9UKY1 873 aaPredicted RBP12.79□□□□□ -0.36
SSFA2-203ENST00000409136 ANP32BQ92688 251 aaKnown RBP12.78□□□□□ -0.36
SSFA2-203ENST00000409136 ZBED9Q6R2W3 1325 aa12.78□□□□□ -0.36
SSFA2-203ENST00000409136 FOXD1Q16676 465 aa12.77□□□□□ -0.36
SSFA2-203ENST00000409136 FRAT1Q92837 279 aaPredicted RBP12.77□□□□□ -0.37
SSFA2-203ENST00000409136 IRX3P78415 501 aaPredicted RBP12.76□□□□□ -0.37
SSFA2-203ENST00000409136 DNTTIP2Q5QJE6 756 aaKnown RBP12.76□□□□□ -0.37
SSFA2-203ENST00000409136 ZNF830Q96NB3 372 aaPredicted RBP12.76□□□□□ -0.37
SSFA2-203ENST00000409136 PTMAP06454 111 aaKnown RBP12.75□□□□□ -0.37
SSFA2-203ENST00000409136 PTMSP20962 102 aa12.75□□□□□ -0.37
SSFA2-203ENST00000409136 FAM193AP78312 1265 aa12.74□□□□□ -0.37
SSFA2-203ENST00000409136 TOP2AP11388 1531 aaKnown RBP12.74□□□□□ -0.37
SSFA2-203ENST00000409136 AKNAQ7Z591 1439 aa12.74□□□□□ -0.37
SSFA2-203ENST00000409136 SMARCA2P51531 1590 aa12.73□□□□□ -0.37
SSFA2-203ENST00000409136 CHRM1P11229 460 aaPredicted RBP12.73□□□□□ -0.37
SSFA2-203ENST00000409136 PDE4AP27815 886 aa12.73□□□□□ -0.37
SSFA2-203ENST00000409136 NFKBIBQ15653 356 aa12.73□□□□□ -0.37
SSFA2-203ENST00000409136 CENPJQ9HC77 1338 aaPredicted RBP12.72□□□□□ -0.37
SSFA2-203ENST00000409136 MAPK8IP2Q13387 824 aaPredicted RBP12.72□□□□□ -0.37
SSFA2-203ENST00000409136 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.71□□□□□ -0.37
SSFA2-203ENST00000409136 SENP3-EIF4A1A0A087X0R7 540 aa12.71□□□□□ -0.38
SSFA2-203ENST00000409136 ARAP1Q96P48 1450 aa12.7□□□□□ -0.38
SSFA2-203ENST00000409136 TCERG1O14776 1098 aaKnown RBP12.7□□□□□ -0.38
SSFA2-203ENST00000409136 CLGNO14967 610 aa12.7□□□□□ -0.38
SSFA2-203ENST00000409136 DDRGK1Q96HY6 314 aa12.69□□□□□ -0.38
SSFA2-203ENST00000409136 RNF216Q9NWF9 866 aaPredicted RBP12.69□□□□□ -0.38
SSFA2-203ENST00000409136 PRKRIP1Q9H875 184 aaPredicted RBP12.68□□□□□ -0.38
SSFA2-203ENST00000409136 KCNA4P22459 653 aa12.68□□□□□ -0.38
SSFA2-203ENST00000409136 NUDCQ9Y266 331 aa12.68□□□□□ -0.38
SSFA2-203ENST00000409136 RRAGDQ9NQL2 400 aaPredicted RBP12.67□□□□□ -0.38
SSFA2-203ENST00000409136 SLC4A3P48751 1232 aa12.67□□□□□ -0.38
SSFA2-203ENST00000409136 KCNG1Q9UIX4 513 aa12.67□□□□□ -0.38
SSFA2-203ENST00000409136 HSPA5P11021 654 aaKnown RBP12.67□□□□□ -0.38
SSFA2-203ENST00000409136 E9PSI1 815 aa12.66□□□□□ -0.38
SSFA2-203ENST00000409136 HDAC5Q9UQL6 1122 aa12.66□□□□□ -0.38
SSFA2-203ENST00000409136 BACH2Q9BYV9 841 aa12.66□□□□□ -0.38
SSFA2-203ENST00000409136 HMGB1P09429 215 aaKnown RBP12.66□□□□□ -0.38
SSFA2-203ENST00000409136 TICAM2Q86XR7 235 aa12.66□□□□□ -0.38
SSFA2-203ENST00000409136 TPM2P07951 284 aa12.65□□□□□ -0.38
SSFA2-203ENST00000409136 ZNF592Q92610 1267 aa12.65□□□□□ -0.38
SSFA2-203ENST00000409136 RGS22Q8NE09 1264 aa12.65□□□□□ -0.38
SSFA2-203ENST00000409136 SMAP1Q8IYB5 467 aaPredicted RBP12.64□□□□□ -0.39
SSFA2-203ENST00000409136 PLCD4Q9BRC7 762 aa12.64□□□□□ -0.39
SSFA2-203ENST00000409136 TMEM51Q9NW97 253 aa12.64□□□□□ -0.39
SSFA2-203ENST00000409136 DCAF11Q8TEB1 546 aa12.63□□□□□ -0.39
SSFA2-203ENST00000409136 SMG6Q86US8 1419 aaKnown RBP12.63□□□□□ -0.39
SSFA2-203ENST00000409136 EIF4G2P78344 907 aaKnown RBP eCLIP12.62□□□□□ -0.39
SSFA2-203ENST00000409136 PPP4R3BQ5MIZ7 849 aa12.62□□□□□ -0.39
SSFA2-203ENST00000409136 MAP7D2Q96T17 732 aa12.62□□□□□ -0.39
SSFA2-203ENST00000409136 SYNJ1O43426 1573 aa12.62□□□□□ -0.39
SSFA2-203ENST00000409136 TRIM44Q96DX7 344 aaPredicted RBP12.61□□□□□ -0.39
SSFA2-203ENST00000409136 ATP1B4Q9UN42 357 aaPredicted RBP12.61□□□□□ -0.39
SSFA2-203ENST00000409136 CNTLNQ9NXG0 1405 aa12.6□□□□□ -0.39
SSFA2-203ENST00000409136 EXOC6Q8TAG9 804 aa12.6□□□□□ -0.39
SSFA2-203ENST00000409136 FHAD1B1AJZ9 1412 aa12.59□□□□□ -0.39
SSFA2-203ENST00000409136 FRAT2O75474 233 aaPredicted RBP12.59□□□□□ -0.39
SSFA2-203ENST00000409136 MS4A1P11836 297 aa12.59□□□□□ -0.39
SSFA2-203ENST00000409136 IGSF3O75054 1194 aa12.59□□□□□ -0.39
SSFA2-203ENST00000409136 TMED8Q6PL24 325 aaPredicted RBP12.58□□□□□ -0.39
SSFA2-203ENST00000409136 CLCN1P35523 988 aa12.58□□□□□ -0.4
SSFA2-203ENST00000409136 L1TD1Q5T7N2 865 aaKnown RBP12.58□□□□□ -0.4
SSFA2-203ENST00000409136 NCAPD3P42695 1498 aa12.58□□□□□ -0.4
SSFA2-203ENST00000409136 RNF123Q5XPI4 1314 aa12.58□□□□□ -0.4
SSFA2-203ENST00000409136 CLSTN1O94985 981 aa12.58□□□□□ -0.4
SSFA2-203ENST00000409136 AEBP1Q8IUX7 1158 aa12.58□□□□□ -0.4
SSFA2-203ENST00000409136 ARID3AQ99856 593 aa12.57□□□□□ -0.4
SSFA2-203ENST00000409136 ZNF622Q969S3 477 aaKnown RBP eCLIP12.57□□□□□ -0.42e-6■□□□□ 9.4
SSFA2-203ENST00000409136 ZNF526Q8TF50 670 aaPredicted RBP12.56□□□□□ -0.4
SSFA2-203ENST00000409136 PHLDB1Q86UU1 1377 aa12.55□□□□□ -0.4
SSFA2-203ENST00000409136 OS9Q13438 667 aaPredicted RBP12.55□□□□□ -0.4
SSFA2-203ENST00000409136 PEG3Q9GZU2 1588 aa12.55□□□□□ -0.4
SSFA2-203ENST00000409136 TMEM132AQ24JP5 1023 aa12.54□□□□□ -0.4
SSFA2-203ENST00000409136 CC2D1BQ5T0F9 858 aaKnown RBP12.54□□□□□ -0.4
SSFA2-203ENST00000409136 AXDND1Q5T1B0 1012 aaPredicted RBP12.54□□□□□ -0.4
SSFA2-203ENST00000409136 SOX12O15370 315 aa12.53□□□□□ -0.4
SSFA2-203ENST00000409136 FAM43BQ6ZT52 329 aaPredicted RBP12.53□□□□□ -0.4
SSFA2-203ENST00000409136 FAM13BQ9NYF5 915 aa12.53□□□□□ -0.4
SSFA2-203ENST00000409136 MYCNP04198 464 aaPredicted RBP12.53□□□□□ -0.4
SSFA2-203ENST00000409136 SKAP1Q86WV1 359 aa12.52□□□□□ -0.4
SSFA2-203ENST00000409136 PSMD1Q99460 953 aa12.52□□□□□ -0.4
SSFA2-203ENST00000409136 RRP1P56182 461 aaKnown RBP12.52□□□□□ -0.4
SSFA2-203ENST00000409136 TAF3Q5VWG9 929 aa12.52□□□□□ -0.4
SSFA2-203ENST00000409136 UTP14CQ5TAP6 766 aaKnown RBP12.51□□□□□ -0.41
SSFA2-203ENST00000409136 CCDC7Q96M83 1385 aa12.5□□□□□ -0.41
SSFA2-203ENST00000409136 CERS3Q8IU89 383 aa12.5□□□□□ -0.41
SSFA2-203ENST00000409136 SMARCA4P51532 1647 aa12.5□□□□□ -0.41
SSFA2-203ENST00000409136 VGFO15240 615 aaPredicted RBP12.49□□□□□ -0.41
SSFA2-203ENST00000409136 ARHGAP35Q9NRY4 1499 aa12.48□□□□□ -0.41
SSFA2-203ENST00000409136 ERICH3Q5RHP9 1530 aa12.48□□□□□ -0.41
SSFA2-203ENST00000409136 P3H3Q8IVL6 736 aa12.48□□□□□ -0.41
SSFA2-203ENST00000409136 PRXQ9BXM0 1461 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms