RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 POGZQ7Z3K3 1410 aa29.6■■■□□ 2.33
PTPN18-203ENST00000409022 RICTORQ6R327 1708 aa29.59■■■□□ 2.33
PTPN18-203ENST00000409022 ZMYM4Q5VZL5 1548 aa29.58■■■□□ 2.33
PTPN18-203ENST00000409022 ARHGEF40Q8TER5 1519 aa29.56■■■□□ 2.32
PTPN18-203ENST00000409022 ZFYVE16Q7Z3T8 1539 aa29.54■■■□□ 2.32
PTPN18-203ENST00000409022 MTUS2Q5JR59 1369 aa29.53■■■□□ 2.32
PTPN18-203ENST00000409022 ZNF518AQ6AHZ1 1483 aa29.51■■■□□ 2.31
PTPN18-203ENST00000409022 LOC105371045A0A1W2PR82 267 aa29.51■■■□□ 2.31
PTPN18-203ENST00000409022 PREX2Q70Z35 1606 aa29.47■■■□□ 2.31
PTPN18-203ENST00000409022 MYT1LQ9UL68 1186 aa29.46■■■□□ 2.31
PTPN18-203ENST00000409022 YEATS2Q9ULM3 1422 aa29.45■■■□□ 2.31
PTPN18-203ENST00000409022 CCNB3Q8WWL7 1395 aa29.43■■■□□ 2.3
PTPN18-203ENST00000409022 AFAP1Q8N556 730 aa29.43■■■□□ 2.3
PTPN18-203ENST00000409022 ZNF777Q9ULD5 760 aaPredicted RBP29.41■■■□□ 2.3
PTPN18-203ENST00000409022 CDC42BPBQ9Y5S2 1711 aa29.41■■■□□ 2.3
PTPN18-203ENST00000409022 ATP10AO60312 1499 aa29.41■■■□□ 2.3
PTPN18-203ENST00000409022 CFDP1Q9UEE9 299 aaPredicted RBP29.4■■■□□ 2.3
PTPN18-203ENST00000409022 GPATCH8Q9UKJ3 1502 aaKnown RBP29.4■■■□□ 2.3
PTPN18-203ENST00000409022 C9orf84Q5VXU9 1444 aa29.38■■■□□ 2.29
PTPN18-203ENST00000409022 ADAMTSL3P82987 1691 aa29.38■■■□□ 2.29
PTPN18-203ENST00000409022 BCORL1Q5H9F3 1711 aa29.38■■■□□ 2.29
PTPN18-203ENST00000409022 ABCC1P33527 1531 aa29.38■■■□□ 2.29
PTPN18-203ENST00000409022 EHBP1L1Q8N3D4 1523 aa29.38■■■□□ 2.29
PTPN18-203ENST00000409022 KDM5CP41229 1560 aa29.37■■■□□ 2.29
PTPN18-203ENST00000409022 VPS8Q8N3P4 1428 aa29.36■■■□□ 2.29
PTPN18-203ENST00000409022 PTPRMP28827 1452 aa29.36■■■□□ 2.29
PTPN18-203ENST00000409022 CDC42BPAQ5VT25 1732 aa29.34■■■□□ 2.29
PTPN18-203ENST00000409022 PLEKHH2Q8IVE3 1493 aa29.34■■■□□ 2.29
PTPN18-203ENST00000409022 MLH3Q9UHC1 1453 aa29.34■■■□□ 2.29
PTPN18-203ENST00000409022 HECW2Q9P2P5 1572 aa29.32■■■□□ 2.28
PTPN18-203ENST00000409022 TRAPPC8Q9Y2L5 1435 aa29.32■■■□□ 2.28
PTPN18-203ENST00000409022 ARHGEF12Q9NZN5 1544 aa29.3■■■□□ 2.28
PTPN18-203ENST00000409022 KIAA1107Q9UPP5 1409 aa29.29■■■□□ 2.28
PTPN18-203ENST00000409022 MLECQ14165 292 aa29.29■■■□□ 2.28
PTPN18-203ENST00000409022 MADDQ8WXG6 1647 aa29.28■■■□□ 2.28
PTPN18-203ENST00000409022 ITSN2Q9NZM3 1697 aa29.27■■■□□ 2.28
PTPN18-203ENST00000409022 SAMD9LQ8IVG5 1584 aa29.25■■■□□ 2.27
PTPN18-203ENST00000409022 HNRNPMP52272 730 aaKnown RBP eCLIP29.24■■■□□ 2.27
PTPN18-203ENST00000409022 SPAG9O60271 1321 aaKnown RBP29.23■■■□□ 2.27
PTPN18-203ENST00000409022 SYCP2Q9BX26 1530 aa29.23■■■□□ 2.27
PTPN18-203ENST00000409022 TIAM1Q13009 1591 aa29.22■■■□□ 2.27
PTPN18-203ENST00000409022 REREQ9P2R6 1566 aa29.21■■■□□ 2.27
PTPN18-203ENST00000409022 DIP2CQ9Y2E4 1556 aa29.21■■■□□ 2.27
PTPN18-203ENST00000409022 NCOA2Q15596 1464 aa29.19■■■□□ 2.26
PTPN18-203ENST00000409022 SUPT6HQ7KZ85 1726 aaKnown RBP29.18■■■□□ 2.26
PTPN18-203ENST00000409022 APLP2Q06481 763 aa29.18■■■□□ 2.26
PTPN18-203ENST00000409022 RIMS1Q86UR5 1692 aaKnown RBP29.18■■■□□ 2.26
PTPN18-203ENST00000409022 MAP3K1Q13233 1512 aa29.16■■■□□ 2.26
PTPN18-203ENST00000409022 SIGLEC1Q9BZZ2 1709 aa29.15■■■□□ 2.26
PTPN18-203ENST00000409022 ESF1Q9H501 851 aaKnown RBP29.15■■■□□ 2.26
PTPN18-203ENST00000409022 ABCA6Q8N139 1617 aa29.15■■■□□ 2.26
PTPN18-203ENST00000409022 LRRC9Q6ZRR7 1453 aa29.15■■■□□ 2.26
PTPN18-203ENST00000409022 AGLP35573 1532 aa29.14■■■□□ 2.25
PTPN18-203ENST00000409022 PLPPR3Q6T4P5 718 aa29.13■■■□□ 2.25
PTPN18-203ENST00000409022 RSPH4AQ5TD94 716 aa29.11■■■□□ 2.25
PTPN18-203ENST00000409022 ZNF644Q9H582 1327 aaPredicted RBP29.11■■■□□ 2.25
PTPN18-203ENST00000409022 KIDINS220Q9ULH0 1771 aa29.11■■■□□ 2.25
PTPN18-203ENST00000409022 FER1L4A9Z1Z3 1794 aa29.09■■■□□ 2.25
PTPN18-203ENST00000409022 ATP7AQ04656 1500 aa29.09■■■□□ 2.25
PTPN18-203ENST00000409022 MBD5Q9P267 1494 aa29.05■■■□□ 2.24
PTPN18-203ENST00000409022 RTEL1-TNFRSF6BF6WH68 1400 aa29.03■■■□□ 2.24
PTPN18-203ENST00000409022 INO80Q9ULG1 1556 aaPredicted RBP29.02■■■□□ 2.24
PTPN18-203ENST00000409022 KANK4Q5T7N3 995 aaPredicted RBP29.02■■■□□ 2.24
PTPN18-203ENST00000409022 CAMSAP2Q08AD1 1489 aa29.02■■■□□ 2.24
PTPN18-203ENST00000409022 A2MP01023 1474 aa29.01■■■□□ 2.23
PTPN18-203ENST00000409022 CCDC141Q6ZP82 1450 aa29.01■■■□□ 2.23
PTPN18-203ENST00000409022 CNTLNQ9NXG0 1405 aa29.01■■■□□ 2.23
PTPN18-203ENST00000409022 LMTK3Q96Q04 1460 aa28.98■■■□□ 2.23
PTPN18-203ENST00000409022 TSPY4P0CV99 314 aa28.98■■■□□ 2.23
PTPN18-203ENST00000409022 TSPY10P0CW01 314 aa28.98■■■□□ 2.23
PTPN18-203ENST00000409022 CEBPAP49715 358 aaPredicted RBP28.96■■■□□ 2.23
PTPN18-203ENST00000409022 MIA2Q96PC5 1412 aa28.95■■■□□ 2.23
PTPN18-203ENST00000409022 MYOM3Q5VTT5 1437 aa28.94■■■□□ 2.22
PTPN18-203ENST00000409022 PPP6R1Q9UPN7 881 aa28.92■■■□□ 2.22
PTPN18-203ENST00000409022 PLXNC1O60486 1568 aa28.92■■■□□ 2.22
PTPN18-203ENST00000409022 ARHGEF5Q12774 1597 aa28.9■■■□□ 2.22
PTPN18-203ENST00000409022 ADGBQ8N7X0 1667 aa28.89■■■□□ 2.22
PTPN18-203ENST00000409022 DHX29Q7Z478 1369 aaKnown RBP28.89■■■□□ 2.22
PTPN18-203ENST00000409022 GGT6Q6P531 493 aa28.89■■■□□ 2.22
PTPN18-203ENST00000409022 HSPA2P54652 639 aa28.86■■■□□ 2.21
PTPN18-203ENST00000409022 UHRF1BP1Q6BDS2 1440 aa28.86■■■□□ 2.21
PTPN18-203ENST00000409022 ZMYM3Q14202 1370 aa28.82■■■□□ 2.2
PTPN18-203ENST00000409022 PREX1Q8TCU6 1659 aa28.81■■■□□ 2.2
PTPN18-203ENST00000409022 KIF3BO15066 747 aa28.79■■■□□ 2.2
PTPN18-203ENST00000409022 NPATQ14207 1427 aa28.78■■■□□ 2.2
PTPN18-203ENST00000409022 C3P01024 1663 aa28.78■■■□□ 2.2
PTPN18-203ENST00000409022 MROH2AA6NES4 1674 aa28.77■■■□□ 2.2
PTPN18-203ENST00000409022 SETD1BQ9UPS6 1966 aaKnown RBP28.76■■■□□ 2.19
PTPN18-203ENST00000409022 MAST1Q9Y2H9 1570 aa28.74■■■□□ 2.19
PTPN18-203ENST00000409022 FGD6Q6ZV73 1430 aa28.71■■■□□ 2.19
PTPN18-203ENST00000409022 DMRT2Q9Y5R5 561 aa28.71■■■□□ 2.19
PTPN18-203ENST00000409022 FAM135AQ9P2D6 1515 aa28.7■■■□□ 2.19
PTPN18-203ENST00000409022 CLTCQ00610 1675 aaKnown RBP28.69■■■□□ 2.18
PTPN18-203ENST00000409022 PTPN23Q9H3S7 1636 aa28.69■■■□□ 2.18
PTPN18-203ENST00000409022 WASHC2CQ9Y4E1 1318 aa28.69■■■□□ 2.18
PTPN18-203ENST00000409022 SHANK2Q9UPX8 1470 aa28.66■■■□□ 2.18
PTPN18-203ENST00000409022 TCOF1Q13428 1488 aaKnown RBP28.66■■■□□ 2.18
PTPN18-203ENST00000409022 PTPRKQ15262 1439 aa28.64■■■□□ 2.18
PTPN18-203ENST00000409022 KDM5DQ9BY66 1539 aa28.64■■■□□ 2.17
PTPN18-203ENST00000409022 ABCC5O15440 1437 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms