RNA–Protein interactions for RNA: ENST00000408968.3

IFITM1-202, Transcript of interferon induced transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFITM1, Length 855 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-202ENST00000408968 ADGRL1O94910 1474 aa21.3■■□□□ 1
IFITM1-202ENST00000408968 ARHGEF40Q8TER5 1519 aa21.29■■□□□ 1
IFITM1-202ENST00000408968 CDC42BPAQ5VT25 1732 aa21.29■■□□□ 1
IFITM1-202ENST00000408968 CDC42BPBQ9Y5S2 1711 aa21.29■■□□□ 1
IFITM1-202ENST00000408968 VPS8Q8N3P4 1428 aa21.26■□□□□ 0.99
IFITM1-202ENST00000408968 MAGI2Q86UL8 1455 aa21.26■□□□□ 0.99
IFITM1-202ENST00000408968 ITSN2Q9NZM3 1697 aa21.25■□□□□ 0.99
IFITM1-202ENST00000408968 EFCAB2Q5VUJ9 269 aa21.25■□□□□ 0.99
IFITM1-202ENST00000408968 POGZQ7Z3K3 1410 aa21.25■□□□□ 0.99
IFITM1-202ENST00000408968 MTUS2Q5JR59 1369 aa21.24■□□□□ 0.99
IFITM1-202ENST00000408968 ZNF518AQ6AHZ1 1483 aa21.22■□□□□ 0.99
IFITM1-202ENST00000408968 ZFYVE16Q7Z3T8 1539 aa21.21■□□□□ 0.99
IFITM1-202ENST00000408968 TIAM1Q13009 1591 aa21.21■□□□□ 0.99
IFITM1-202ENST00000408968 SCAPERQ9BY12 1400 aa21.21■□□□□ 0.99
IFITM1-202ENST00000408968 ABCC1P33527 1531 aa21.2■□□□□ 0.98
IFITM1-202ENST00000408968 SUPT6HQ7KZ85 1726 aaKnown RBP21.2■□□□□ 0.98
IFITM1-202ENST00000408968 KDM5CP41229 1560 aa21.19■□□□□ 0.98
IFITM1-202ENST00000408968 RAPGEF3O95398 923 aa21.19■□□□□ 0.98
IFITM1-202ENST00000408968 LOC105371045A0A1W2PR82 267 aa21.17■□□□□ 0.98
IFITM1-202ENST00000408968 MAP3K1Q13233 1512 aa21.17■□□□□ 0.98
IFITM1-202ENST00000408968 HECW2Q9P2P5 1572 aa21.17■□□□□ 0.98
IFITM1-202ENST00000408968 PLEKHH2Q8IVE3 1493 aa21.15■□□□□ 0.98
IFITM1-202ENST00000408968 CCNB3Q8WWL7 1395 aa21.13■□□□□ 0.97
IFITM1-202ENST00000408968 GPATCH8Q9UKJ3 1502 aaKnown RBP21.13■□□□□ 0.97
IFITM1-202ENST00000408968 BCORL1Q5H9F3 1711 aa21.12■□□□□ 0.97
IFITM1-202ENST00000408968 SAMD9LQ8IVG5 1584 aa21.12■□□□□ 0.97
IFITM1-202ENST00000408968 KDM4FA0A1W2PPD8 638 aa21.12■□□□□ 0.97
IFITM1-202ENST00000408968 ADAMTSL3P82987 1691 aa21.09■□□□□ 0.97
IFITM1-202ENST00000408968 REREQ9P2R6 1566 aa21.08■□□□□ 0.97
IFITM1-202ENST00000408968 C9orf84Q5VXU9 1444 aa21.07■□□□□ 0.96
IFITM1-202ENST00000408968 SYCP2Q9BX26 1530 aa21.07■□□□□ 0.96
IFITM1-202ENST00000408968 LRRC9Q6ZRR7 1453 aa21.07■□□□□ 0.96
IFITM1-202ENST00000408968 MLH3Q9UHC1 1453 aa21.07■□□□□ 0.96
IFITM1-202ENST00000408968 KIAA1107Q9UPP5 1409 aa21.06■□□□□ 0.96
IFITM1-202ENST00000408968 YEATS2Q9ULM3 1422 aa21.05■□□□□ 0.96
IFITM1-202ENST00000408968 ATP10AO60312 1499 aa21.05■□□□□ 0.96
IFITM1-202ENST00000408968 NCOA2Q15596 1464 aa21.05■□□□□ 0.96
IFITM1-202ENST00000408968 DIP2CQ9Y2E4 1556 aa21.04■□□□□ 0.96
IFITM1-202ENST00000408968 CFDP1Q9UEE9 299 aaPredicted RBP21.03■□□□□ 0.96
IFITM1-202ENST00000408968 ABCA6Q8N139 1617 aa21.03■□□□□ 0.96
IFITM1-202ENST00000408968 ARHGEF12Q9NZN5 1544 aa21.02■□□□□ 0.96
IFITM1-202ENST00000408968 MADDQ8WXG6 1647 aa21.01■□□□□ 0.95
IFITM1-202ENST00000408968 KIDINS220Q9ULH0 1771 aa21.01■□□□□ 0.95
IFITM1-202ENST00000408968 TRAPPC8Q9Y2L5 1435 aa21■□□□□ 0.95
IFITM1-202ENST00000408968 INO80Q9ULG1 1556 aaPredicted RBP21■□□□□ 0.95
IFITM1-202ENST00000408968 ARID4BQ4LE39 1312 aaPredicted RBP21■□□□□ 0.95
IFITM1-202ENST00000408968 FER1L4A9Z1Z3 1794 aa21■□□□□ 0.95
IFITM1-202ENST00000408968 SIGLEC1Q9BZZ2 1709 aa20.98■□□□□ 0.95
IFITM1-202ENST00000408968 APLP2Q06481 763 aa20.97■□□□□ 0.95
IFITM1-202ENST00000408968 ATP7AQ04656 1500 aa20.97■□□□□ 0.95
IFITM1-202ENST00000408968 RIMS1Q86UR5 1692 aaKnown RBP20.96■□□□□ 0.95
IFITM1-202ENST00000408968 ZNF777Q9ULD5 760 aaPredicted RBP20.96■□□□□ 0.95
IFITM1-202ENST00000408968 AGLP35573 1532 aa20.95■□□□□ 0.94
IFITM1-202ENST00000408968 AFAP1Q8N556 730 aa20.95■□□□□ 0.94
IFITM1-202ENST00000408968 ADGBQ8N7X0 1667 aa20.95■□□□□ 0.94
IFITM1-202ENST00000408968 CAMSAP2Q08AD1 1489 aa20.94■□□□□ 0.94
IFITM1-202ENST00000408968 MYT1LQ9UL68 1186 aa20.94■□□□□ 0.94
IFITM1-202ENST00000408968 PTPRMP28827 1452 aa20.93■□□□□ 0.94
IFITM1-202ENST00000408968 ARHGEF5Q12774 1597 aa20.93■□□□□ 0.94
IFITM1-202ENST00000408968 CCDC141Q6ZP82 1450 aa20.91■□□□□ 0.94
IFITM1-202ENST00000408968 MIA2Q96PC5 1412 aa20.9■□□□□ 0.94
IFITM1-202ENST00000408968 SPAG9O60271 1321 aaKnown RBP20.9■□□□□ 0.94
IFITM1-202ENST00000408968 MYOM3Q5VTT5 1437 aa20.89■□□□□ 0.94
IFITM1-202ENST00000408968 PLXNC1O60486 1568 aa20.89■□□□□ 0.93
IFITM1-202ENST00000408968 MBD5Q9P267 1494 aa20.88■□□□□ 0.93
IFITM1-202ENST00000408968 RTEL1-TNFRSF6BF6WH68 1400 aa20.88■□□□□ 0.93
IFITM1-202ENST00000408968 RSPH4AQ5TD94 716 aa20.87■□□□□ 0.93
IFITM1-202ENST00000408968 HNRNPMP52272 730 aaKnown RBP eCLIP20.85■□□□□ 0.93
IFITM1-202ENST00000408968 PLPPR3Q6T4P5 718 aa20.84■□□□□ 0.93
IFITM1-202ENST00000408968 MAST1Q9Y2H9 1570 aa20.83■□□□□ 0.92
IFITM1-202ENST00000408968 A2MP01023 1474 aa20.82■□□□□ 0.92
IFITM1-202ENST00000408968 MROH2AA6NES4 1674 aa20.82■□□□□ 0.92
IFITM1-202ENST00000408968 KANK4Q5T7N3 995 aaPredicted RBP20.81■□□□□ 0.92
IFITM1-202ENST00000408968 CROCC2H7BZ55 1655 aa20.8■□□□□ 0.92
IFITM1-202ENST00000408968 CNTLNQ9NXG0 1405 aa20.8■□□□□ 0.92
IFITM1-202ENST00000408968 ZNF644Q9H582 1327 aaPredicted RBP20.79■□□□□ 0.92
IFITM1-202ENST00000408968 PTPN23Q9H3S7 1636 aa20.79■□□□□ 0.92
IFITM1-202ENST00000408968 FAM135AQ9P2D6 1515 aa20.78■□□□□ 0.92
IFITM1-202ENST00000408968 MLECQ14165 292 aa20.76■□□□□ 0.91
IFITM1-202ENST00000408968 PREX1Q8TCU6 1659 aa20.76■□□□□ 0.91
IFITM1-202ENST00000408968 SHANK2Q9UPX8 1470 aa20.75■□□□□ 0.91
IFITM1-202ENST00000408968 C3P01024 1663 aa20.74■□□□□ 0.91
IFITM1-202ENST00000408968 FGD6Q6ZV73 1430 aa20.74■□□□□ 0.91
IFITM1-202ENST00000408968 ESF1Q9H501 851 aaKnown RBP20.74■□□□□ 0.91
IFITM1-202ENST00000408968 TCOF1Q13428 1488 aaKnown RBP20.74■□□□□ 0.91
IFITM1-202ENST00000408968 TSPY4P0CV99 314 aa20.73■□□□□ 0.91
IFITM1-202ENST00000408968 TSPY10P0CW01 314 aa20.73■□□□□ 0.91
IFITM1-202ENST00000408968 DNMT1P26358 1616 aaKnown RBP20.73■□□□□ 0.91
IFITM1-202ENST00000408968 EIF2AK4Q9P2K8 1649 aaKnown RBP20.73■□□□□ 0.91
IFITM1-202ENST00000408968 SETD1BQ9UPS6 1966 aaKnown RBP20.72■□□□□ 0.91
IFITM1-202ENST00000408968 DHX29Q7Z478 1369 aaKnown RBP20.7■□□□□ 0.9
IFITM1-202ENST00000408968 CLTCQ00610 1675 aaKnown RBP20.69■□□□□ 0.9
IFITM1-202ENST00000408968 LMTK3Q96Q04 1460 aa20.69■□□□□ 0.9
IFITM1-202ENST00000408968 PPP6R1Q9UPN7 881 aa20.68■□□□□ 0.9
IFITM1-202ENST00000408968 RNF17Q9BXT8 1623 aaKnown RBP20.67■□□□□ 0.9
IFITM1-202ENST00000408968 ZC3H13Q5T200 1668 aaKnown RBP20.67■□□□□ 0.9
IFITM1-202ENST00000408968 DUOX2Q9NRD8 1548 aa20.65■□□□□ 0.9
IFITM1-202ENST00000408968 KDM5DQ9BY66 1539 aa20.64■□□□□ 0.9
IFITM1-202ENST00000408968 DAPK1P53355 1430 aa20.63■□□□□ 0.89
IFITM1-202ENST00000408968 NPATQ14207 1427 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms