RNA–Protein interactions for RNA: ENST00000404724.7

CDC45-202, Transcript of cell division cycle 45, humanhuman

TSL 2 BASIC

Gene CDC45, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC45-202ENST00000404724 MYO5CQ9NQX4 1742 aa22.37■■□□□ 1.17
CDC45-202ENST00000404724 SCAPERQ9BY12 1400 aa22.37■■□□□ 1.17
CDC45-202ENST00000404724 POGZQ7Z3K3 1410 aa22.36■■□□□ 1.17
CDC45-202ENST00000404724 LMTK3Q96Q04 1460 aa22.33■■□□□ 1.17
CDC45-202ENST00000404724 PCF11O94913 1555 aaKnown RBP22.32■■□□□ 1.16
CDC45-202ENST00000404724 PLPPR3Q6T4P5 718 aa22.31■■□□□ 1.16
CDC45-202ENST00000404724 TROQ12816 1431 aaPredicted RBP22.31■■□□□ 1.16
CDC45-202ENST00000404724 MLECQ14165 292 aa22.29■■□□□ 1.16
CDC45-202ENST00000404724 CDC42BPBQ9Y5S2 1711 aa22.27■■□□□ 1.16
CDC45-202ENST00000404724 MAGI2Q86UL8 1455 aa22.27■■□□□ 1.16
CDC45-202ENST00000404724 ARHGAP5Q13017 1502 aa22.26■■□□□ 1.15
CDC45-202ENST00000404724 FER1L4A9Z1Z3 1794 aa22.25■■□□□ 1.15
CDC45-202ENST00000404724 EFCAB2Q5VUJ9 269 aa22.24■■□□□ 1.15
CDC45-202ENST00000404724 AFAP1Q8N556 730 aa22.24■■□□□ 1.15
CDC45-202ENST00000404724 HSPA2P54652 639 aa22.23■■□□□ 1.15
CDC45-202ENST00000404724 CDK11AQ9UQ88 783 aaPredicted RBP22.22■■□□□ 1.15
CDC45-202ENST00000404724 CASKIN1Q8WXD9 1431 aa22.22■■□□□ 1.15
CDC45-202ENST00000404724 KDM5CP41229 1560 aa22.21■■□□□ 1.15
CDC45-202ENST00000404724 ATP10AO60312 1499 aa22.21■■□□□ 1.15
CDC45-202ENST00000404724 ARHGEF12Q9NZN5 1544 aa22.2■■□□□ 1.15
CDC45-202ENST00000404724 PREX2Q70Z35 1606 aa22.19■■□□□ 1.14
CDC45-202ENST00000404724 CLIP1P30622 1438 aa22.19■■□□□ 1.14
CDC45-202ENST00000404724 C9orf84Q5VXU9 1444 aa22.19■■□□□ 1.14
CDC45-202ENST00000404724 ZNF518AQ6AHZ1 1483 aa22.19■■□□□ 1.14
CDC45-202ENST00000404724 DIP2CQ9Y2E4 1556 aa22.17■■□□□ 1.14
CDC45-202ENST00000404724 ABCA6Q8N139 1617 aa22.17■■□□□ 1.14
CDC45-202ENST00000404724 CDC42BPAQ5VT25 1732 aa22.17■■□□□ 1.14
CDC45-202ENST00000404724 TRAPPC8Q9Y2L5 1435 aa22.16■■□□□ 1.14
CDC45-202ENST00000404724 CCDC18Q5T9S5 1454 aa22.15■■□□□ 1.14
CDC45-202ENST00000404724 ABCC1P33527 1531 aa22.15■■□□□ 1.14
CDC45-202ENST00000404724 CEBPAP49715 358 aaPredicted RBP22.14■■□□□ 1.14
CDC45-202ENST00000404724 ITSN2Q9NZM3 1697 aa22.13■■□□□ 1.13
CDC45-202ENST00000404724 FYCO1Q9BQS8 1478 aa22.12■■□□□ 1.13
CDC45-202ENST00000404724 KIDINS220Q9ULH0 1771 aa22.08■■□□□ 1.13
CDC45-202ENST00000404724 SAMD9LQ8IVG5 1584 aa22.07■■□□□ 1.12
CDC45-202ENST00000404724 MLH3Q9UHC1 1453 aa22.07■■□□□ 1.12
CDC45-202ENST00000404724 MYT1LQ9UL68 1186 aa22.07■■□□□ 1.12
CDC45-202ENST00000404724 FBXO41Q8TF61 875 aa22.05■■□□□ 1.12
CDC45-202ENST00000404724 REREQ9P2R6 1566 aa22.05■■□□□ 1.12
CDC45-202ENST00000404724 PREX1Q8TCU6 1659 aa22.04■■□□□ 1.12
CDC45-202ENST00000404724 GPATCH8Q9UKJ3 1502 aaKnown RBP22.03■■□□□ 1.12
CDC45-202ENST00000404724 SYCP2Q9BX26 1530 aa22.03■■□□□ 1.12
CDC45-202ENST00000404724 C3P01024 1663 aa22.02■■□□□ 1.12
CDC45-202ENST00000404724 ZNF777Q9ULD5 760 aaPredicted RBP22.01■■□□□ 1.11
CDC45-202ENST00000404724 STRCQ7RTU9 1775 aa21.99■■□□□ 1.11
CDC45-202ENST00000404724 HNRNPMP52272 730 aaKnown RBP eCLIP21.98■■□□□ 1.113e-6■■□□□ 12.1
CDC45-202ENST00000404724 AGLP35573 1532 aa21.98■■□□□ 1.11
CDC45-202ENST00000404724 SUPT6HQ7KZ85 1726 aaKnown RBP21.93■■□□□ 1.1
CDC45-202ENST00000404724 ZNF644Q9H582 1327 aaPredicted RBP21.92■■□□□ 1.1
CDC45-202ENST00000404724 TIAM1Q13009 1591 aa21.91■■□□□ 1.1
CDC45-202ENST00000404724 INO80Q9ULG1 1556 aaPredicted RBP21.91■■□□□ 1.1
CDC45-202ENST00000404724 ATP7AQ04656 1500 aa21.9■■□□□ 1.1
CDC45-202ENST00000404724 SETD1BQ9UPS6 1966 aaKnown RBP21.9■■□□□ 1.1
CDC45-202ENST00000404724 UHRF1BP1Q6BDS2 1440 aa21.9■■□□□ 1.1
CDC45-202ENST00000404724 MTUS2Q5JR59 1369 aa21.89■■□□□ 1.09
CDC45-202ENST00000404724 SPAG9O60271 1321 aaKnown RBP21.89■■□□□ 1.09
CDC45-202ENST00000404724 CFDP1Q9UEE9 299 aaPredicted RBP21.88■■□□□ 1.09
CDC45-202ENST00000404724 CEP162Q5TB80 1403 aa21.88■■□□□ 1.09
CDC45-202ENST00000404724 CCNB3Q8WWL7 1395 aa21.88■■□□□ 1.09
CDC45-202ENST00000404724 PLXNC1O60486 1568 aa21.87■■□□□ 1.09
CDC45-202ENST00000404724 CERKQ8TCT0 537 aa21.86■■□□□ 1.09
CDC45-202ENST00000404724 KIAA1107Q9UPP5 1409 aa21.86■■□□□ 1.09
CDC45-202ENST00000404724 CLTCQ00610 1675 aaKnown RBP21.83■■□□□ 1.09
CDC45-202ENST00000404724 EHBP1L1Q8N3D4 1523 aa21.83■■□□□ 1.08
CDC45-202ENST00000404724 MBD5Q9P267 1494 aa21.82■■□□□ 1.08
CDC45-202ENST00000404724 MROH2AA6NES4 1674 aa21.81■■□□□ 1.08
CDC45-202ENST00000404724 ESF1Q9H501 851 aaKnown RBP21.81■■□□□ 1.08
CDC45-202ENST00000404724 A2MP01023 1474 aa21.81■■□□□ 1.08
CDC45-202ENST00000404724 PLEKHH2Q8IVE3 1493 aa21.8■■□□□ 1.08
CDC45-202ENST00000404724 ZMYM3Q14202 1370 aa21.79■■□□□ 1.08
CDC45-202ENST00000404724 CNTLNQ9NXG0 1405 aa21.79■■□□□ 1.08
CDC45-202ENST00000404724 ADGBQ8N7X0 1667 aa21.76■■□□□ 1.07
CDC45-202ENST00000404724 LOC105371045A0A1W2PR82 267 aa21.75■■□□□ 1.07
CDC45-202ENST00000404724 NCOA1Q15788 1441 aa21.75■■□□□ 1.07
CDC45-202ENST00000404724 NCOA2Q15596 1464 aa21.74■■□□□ 1.07
CDC45-202ENST00000404724 GGT6Q6P531 493 aa21.74■■□□□ 1.07
CDC45-202ENST00000404724 CAMSAP1Q5T5Y3 1602 aa21.73■■□□□ 1.07
CDC45-202ENST00000404724 MYO3AQ8NEV4 1616 aa21.73■■□□□ 1.07
CDC45-202ENST00000404724 NPATQ14207 1427 aa21.73■■□□□ 1.07
CDC45-202ENST00000404724 CAMSAP2Q08AD1 1489 aa21.71■■□□□ 1.07
CDC45-202ENST00000404724 PTPRTO14522 1441 aa21.71■■□□□ 1.07
CDC45-202ENST00000404724 PTPRKQ15262 1439 aa21.71■■□□□ 1.07
CDC45-202ENST00000404724 LTBP4Q8N2S1 1624 aa21.7■■□□□ 1.06
CDC45-202ENST00000404724 DMRT2Q9Y5R5 561 aa21.69■■□□□ 1.06
CDC45-202ENST00000404724 ZNF142P52746 1687 aaPredicted RBP21.68■■□□□ 1.06
CDC45-202ENST00000404724 NCKAP5LQ9HCH0 1330 aa21.67■■□□□ 1.06
CDC45-202ENST00000404724 CEP170BQ9Y4F5 1589 aaPredicted RBP21.66■■□□□ 1.06
CDC45-202ENST00000404724 CCDC141Q6ZP82 1450 aa21.65■■□□□ 1.06
CDC45-202ENST00000404724 RTEL1-TNFRSF6BF6WH68 1400 aa21.65■■□□□ 1.06
CDC45-202ENST00000404724 DHX29Q7Z478 1369 aaKnown RBP21.63■■□□□ 1.05
CDC45-202ENST00000404724 KANK4Q5T7N3 995 aaPredicted RBP21.62■■□□□ 1.05
CDC45-202ENST00000404724 LRRC9Q6ZRR7 1453 aa21.61■■□□□ 1.05
CDC45-202ENST00000404724 VPS8Q8N3P4 1428 aa21.61■■□□□ 1.05
CDC45-202ENST00000404724 FBXO31Q5XUX0 539 aaPredicted RBP21.6■■□□□ 1.05
CDC45-202ENST00000404724 KIF3BO15066 747 aa21.6■■□□□ 1.05
CDC45-202ENST00000404724 ZNF335Q9H4Z2 1342 aaPredicted RBP21.59■■□□□ 1.05
CDC45-202ENST00000404724 TCOF1Q13428 1488 aaKnown RBP21.58■■□□□ 1.05
CDC45-202ENST00000404724 ARHGEF5Q12774 1597 aa21.58■■□□□ 1.05
CDC45-202ENST00000404724 DNMT1P26358 1616 aaKnown RBP21.58■■□□□ 1.04
CDC45-202ENST00000404724 PLA2R1Q13018 1463 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms