RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 WDR70Q9NW82 654 aa7.92□□□□□ -1.14
CNGA1-202ENST00000402813 CLSPNQ9HAW4 1339 aa7.91□□□□□ -1.14
CNGA1-202ENST00000402813 FLIIQ13045 1269 aa7.91□□□□□ -1.14
CNGA1-202ENST00000402813 RIPOR2Q9Y4F9 1068 aa7.9□□□□□ -1.14
CNGA1-202ENST00000402813 SPDYE4A6NLX3 237 aa7.9□□□□□ -1.15
CNGA1-202ENST00000402813 MCCP23508 829 aa7.9□□□□□ -1.15
CNGA1-202ENST00000402813 ANKRD13AQ8IZ07 590 aa7.9□□□□□ -1.15
CNGA1-202ENST00000402813 RETREG2Q8NC44 543 aa7.89□□□□□ -1.15
CNGA1-202ENST00000402813 SPATA32Q96LK8 384 aa7.89□□□□□ -1.15
CNGA1-202ENST00000402813 HSP90AB4PQ58FF6 505 aa7.89□□□□□ -1.15
CNGA1-202ENST00000402813 CNPY4Q8N129 248 aa7.89□□□□□ -1.15
CNGA1-202ENST00000402813 GTPBP6O43824 516 aaPredicted RBP7.88□□□□□ -1.15
CNGA1-202ENST00000402813 ZMYND10O75800 440 aa7.88□□□□□ -1.15
CNGA1-202ENST00000402813 RBM10P98175 930 aaKnown RBP7.88□□□□□ -1.15
CNGA1-202ENST00000402813 DNAJC2Q99543 621 aaKnown RBP7.88□□□□□ -1.15
CNGA1-202ENST00000402813 GPBP1L1Q9HC44 474 aaPredicted RBP7.87□□□□□ -1.15
CNGA1-202ENST00000402813 KCNV2Q8TDN2 545 aa7.87□□□□□ -1.15
CNGA1-202ENST00000402813 NKX1-1Q15270 411 aaPredicted RBP7.86□□□□□ -1.15
CNGA1-202ENST00000402813 ZC3H4Q9UPT8 1303 aaKnown RBP7.86□□□□□ -1.15
CNGA1-202ENST00000402813 SMARCA5O60264 1052 aaPredicted RBP7.84□□□□□ -1.15
CNGA1-202ENST00000402813 ONECUT3O60422 494 aaPredicted RBP7.84□□□□□ -1.15
CNGA1-202ENST00000402813 GPATCH11Q8N954 259 aa7.84□□□□□ -1.15
CNGA1-202ENST00000402813 UNCXA6NJT0 531 aa7.82□□□□□ -1.16
CNGA1-202ENST00000402813 ERICH6BQ5W0A0 696 aa7.82□□□□□ -1.16
CNGA1-202ENST00000402813 NOL8Q76FK4 1167 aaKnown RBP7.82□□□□□ -1.16
CNGA1-202ENST00000402813 RNF216Q9NWF9 866 aaPredicted RBP7.82□□□□□ -1.16
CNGA1-202ENST00000402813 SERPINA10Q9UK55 444 aa7.82□□□□□ -1.16
CNGA1-202ENST00000402813 ARIH1Q9Y4X5 557 aaPredicted RBP7.82□□□□□ -1.16
CNGA1-202ENST00000402813 PATL2C9JE40 543 aaKnown RBP7.81□□□□□ -1.16
CNGA1-202ENST00000402813 CLUAP1Q96AJ1 413 aa7.81□□□□□ -1.16
CNGA1-202ENST00000402813 BRD1O95696 1058 aa7.81□□□□□ -1.16
CNGA1-202ENST00000402813 KDM4CQ9H3R0 1056 aa7.81□□□□□ -1.16
CNGA1-202ENST00000402813 ATF5Q9Y2D1 282 aaPredicted RBP7.81□□□□□ -1.16
CNGA1-202ENST00000402813 ANP32EQ9BTT0 268 aa7.8□□□□□ -1.16
CNGA1-202ENST00000402813 NEFMP07197 916 aa7.79□□□□□ -1.16
CNGA1-202ENST00000402813 MYH16Q9H6N6 1097 aa7.78□□□□□ -1.16
CNGA1-202ENST00000402813 TMTC2Q8N394 836 aa7.78□□□□□ -1.16
CNGA1-202ENST00000402813 FAM43BQ6ZT52 329 aaPredicted RBP7.77□□□□□ -1.16
CNGA1-202ENST00000402813 MARCH6O60337 910 aa7.77□□□□□ -1.17
CNGA1-202ENST00000402813 SPTY2D1Q68D10 685 aaPredicted RBP7.77□□□□□ -1.17
CNGA1-202ENST00000402813 LAS1LQ9Y4W2 734 aaKnown RBP7.77□□□□□ -1.17
CNGA1-202ENST00000402813 SCAF1Q9H7N4 1312 aaKnown RBP7.76□□□□□ -1.17
CNGA1-202ENST00000402813 CCDC97Q96F63 343 aaPredicted RBP7.76□□□□□ -1.17
CNGA1-202ENST00000402813 PPME1Q9Y570 386 aa7.76□□□□□ -1.17
CNGA1-202ENST00000402813 SGSM3Q96HU1 749 aa7.75□□□□□ -1.17
CNGA1-202ENST00000402813 SECISBP2LQ93073 1101 aaKnown RBP7.75□□□□□ -1.17
CNGA1-202ENST00000402813 NAP1L2Q9ULW6 460 aaPredicted RBP7.75□□□□□ -1.17
CNGA1-202ENST00000402813 TPD52L2O43399 206 aaKnown RBP7.74□□□□□ -1.17
CNGA1-202ENST00000402813 PTMAP06454 111 aaKnown RBP7.74□□□□□ -1.17
CNGA1-202ENST00000402813 KCNA1Q09470 495 aa7.74□□□□□ -1.17
CNGA1-202ENST00000402813 AK7Q96M32 723 aa7.74□□□□□ -1.17
CNGA1-202ENST00000402813 SUGT1Q9Y2Z0 365 aa7.74□□□□□ -1.17
CNGA1-202ENST00000402813 IPO4Q8TEX9 1081 aaKnown RBP7.74□□□□□ -1.17
CNGA1-202ENST00000402813 WWC1Q8IX03 1113 aa7.73□□□□□ -1.17
CNGA1-202ENST00000402813 DRC1Q96MC2 740 aa7.73□□□□□ -1.17
CNGA1-202ENST00000402813 ABCC9O60706 1549 aa7.73□□□□□ -1.17
CNGA1-202ENST00000402813 ZNF777Q9ULD5 760 aaPredicted RBP7.73□□□□□ -1.17
CNGA1-202ENST00000402813 ANKRD62A6NC57 917 aa7.72□□□□□ -1.17
CNGA1-202ENST00000402813 SIRT1Q96EB6 747 aa7.72□□□□□ -1.17
CNGA1-202ENST00000402813 HIRIP3Q9BW71 556 aaPredicted RBP7.72□□□□□ -1.17
CNGA1-202ENST00000402813 FAM50AQ14320 339 aaKnown RBP7.72□□□□□ -1.17
CNGA1-202ENST00000402813 TESPA1A2RU30 521 aaPredicted RBP7.71□□□□□ -1.18
CNGA1-202ENST00000402813 MCCD1P59942 119 aaPredicted RBP7.71□□□□□ -1.18
CNGA1-202ENST00000402813 GORABQ5T7V8 394 aa7.71□□□□□ -1.18
CNGA1-202ENST00000402813 KCNG1Q9UIX4 513 aa7.7□□□□□ -1.18
CNGA1-202ENST00000402813 RBM47A0AV96 593 aaKnown RBP7.7□□□□□ -1.18
CNGA1-202ENST00000402813 SLC52A1Q9NWF4 448 aa7.7□□□□□ -1.18
CNGA1-202ENST00000402813 FNBP4Q8N3X1 1017 aaPredicted RBP7.69□□□□□ -1.18
CNGA1-202ENST00000402813 NME8Q8N427 588 aa7.69□□□□□ -1.18
CNGA1-202ENST00000402813 RBM27Q9P2N5 1060 aaKnown RBP7.69□□□□□ -1.18
CNGA1-202ENST00000402813 GLIPR1L2Q4G1C9 344 aa7.69□□□□□ -1.18
CNGA1-202ENST00000402813 TERF2IPQ9NYB0 399 aa7.69□□□□□ -1.18
CNGA1-202ENST00000402813 SREK1Q8WXA9 508 aaKnown RBP7.68□□□□□ -1.18
CNGA1-202ENST00000402813 PROSER2Q86WR7 435 aaPredicted RBP7.68□□□□□ -1.18
CNGA1-202ENST00000402813 ERCC3P19447 782 aa7.67□□□□□ -1.18
CNGA1-202ENST00000402813 OS9Q13438 667 aaPredicted RBP7.67□□□□□ -1.18
CNGA1-202ENST00000402813 C8orf37Q96NL8 207 aa7.67□□□□□ -1.18
CNGA1-202ENST00000402813 KIAA1522Q9P206 1035 aaPredicted RBP7.66□□□□□ -1.18
CNGA1-202ENST00000402813 MYT1LQ9UL68 1186 aa7.66□□□□□ -1.18
CNGA1-202ENST00000402813 MICAL1Q8TDZ2 1067 aa7.66□□□□□ -1.18
CNGA1-202ENST00000402813 PPP1R15AO75807 674 aaPredicted RBP7.65□□□□□ -1.18
CNGA1-202ENST00000402813 RALBP1Q15311 655 aa7.65□□□□□ -1.18
CNGA1-202ENST00000402813 FTSJ3Q8IY81 847 aaKnown RBP7.65□□□□□ -1.18
CNGA1-202ENST00000402813 RIOK3O14730 519 aaKnown RBP7.65□□□□□ -1.18
CNGA1-202ENST00000402813 TSR1Q2NL82 804 aaKnown RBP7.65□□□□□ -1.19
CNGA1-202ENST00000402813 SND1Q7KZF4 910 aaKnown RBP eCLIP7.65□□□□□ -1.19
CNGA1-202ENST00000402813 FAM117AQ9C073 453 aa7.65□□□□□ -1.19
CNGA1-202ENST00000402813 UBA5Q9GZZ9 404 aa7.64□□□□□ -1.19
CNGA1-202ENST00000402813 PLEKHG3A1L390 1219 aa7.64□□□□□ -1.19
CNGA1-202ENST00000402813 TCF3P15923 654 aa7.64□□□□□ -1.19
CNGA1-202ENST00000402813 APBB1IPQ7Z5R6 666 aaPredicted RBP7.64□□□□□ -1.19
CNGA1-202ENST00000402813 ARHGEF1Q92888 912 aaKnown RBP7.64□□□□□ -1.19
CNGA1-202ENST00000402813 PDE4DQ08499 809 aa7.63□□□□□ -1.19
CNGA1-202ENST00000402813 PLSCR2Q9NRY7 297 aa7.63□□□□□ -1.19
CNGA1-202ENST00000402813 FOXD4L6Q3SYB3 417 aaPredicted RBP7.63□□□□□ -1.19
CNGA1-202ENST00000402813 FOXD4L3Q6VB84 417 aaPredicted RBP7.63□□□□□ -1.19
CNGA1-202ENST00000402813 SEMA3EO15041 775 aa7.62□□□□□ -1.19
CNGA1-202ENST00000402813 PHF14O94880 888 aa7.62□□□□□ -1.19
CNGA1-202ENST00000402813 HMGB1P1B2RPK0 211 aaPredicted RBP7.61□□□□□ -1.19
CNGA1-202ENST00000402813 TRIM66O15016 1216 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms