RNA–Protein interactions for RNA: ENST00000402738.5

HERC3-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-202ENST00000402738 BAZ1BQ9UIG0 1483 aaKnown RBP12.4□□□□□ -0.42
HERC3-202ENST00000402738 RAB3GAP2Q9H2M9 1393 aa12.39□□□□□ -0.43
HERC3-202ENST00000402738 EXOC6Q8TAG9 804 aa12.39□□□□□ -0.43
HERC3-202ENST00000402738 SENP3Q9H4L4 574 aaPredicted RBP12.39□□□□□ -0.43
HERC3-202ENST00000402738 CHMP4BQ9H444 224 aaKnown RBP12.38□□□□□ -0.43
HERC3-202ENST00000402738 TAOK2Q9UL54 1235 aa12.38□□□□□ -0.43
HERC3-202ENST00000402738 NFKBIBQ15653 356 aa12.38□□□□□ -0.43
HERC3-202ENST00000402738 FAM161AQ3B820 660 aa12.38□□□□□ -0.43
HERC3-202ENST00000402738 RWDD1Q9H446 243 aaPredicted RBP12.37□□□□□ -0.43
HERC3-202ENST00000402738 DDX11L8A8MPP1 907 aa12.37□□□□□ -0.43
HERC3-202ENST00000402738 KANK4Q5T7N3 995 aaPredicted RBP12.37□□□□□ -0.43
HERC3-202ENST00000402738 WRNQ14191 1432 aaPredicted RBP eCLIP12.37□□□□□ -0.43
HERC3-202ENST00000402738 PAK3O75914 559 aaPredicted RBP12.36□□□□□ -0.43
HERC3-202ENST00000402738 PODXL2Q9NZ53 605 aa12.36□□□□□ -0.43
HERC3-202ENST00000402738 SYAP1Q96A49 352 aaPredicted RBP12.36□□□□□ -0.43
HERC3-202ENST00000402738 KTN1Q86UP2 1357 aaKnown RBP12.35□□□□□ -0.43
HERC3-202ENST00000402738 VPS8Q8N3P4 1428 aa12.35□□□□□ -0.43
HERC3-202ENST00000402738 SOGA1O94964 1423 aa12.35□□□□□ -0.43
HERC3-202ENST00000402738 MCCP23508 829 aa12.34□□□□□ -0.43
HERC3-202ENST00000402738 KCNJ4P48050 445 aa12.34□□□□□ -0.43
HERC3-202ENST00000402738 ZNF771Q7L3S4 317 aaPredicted RBP12.34□□□□□ -0.43
HERC3-202ENST00000402738 U2SURPO15042 1029 aaKnown RBP12.34□□□□□ -0.43
HERC3-202ENST00000402738 PLIN1O60240 522 aa12.33□□□□□ -0.43
HERC3-202ENST00000402738 FGD1P98174 961 aa12.33□□□□□ -0.43
HERC3-202ENST00000402738 FAM43AQ8N2R8 423 aa12.33□□□□□ -0.43
HERC3-202ENST00000402738 DCAF11Q8TEB1 546 aa12.33□□□□□ -0.44
HERC3-202ENST00000402738 ZBED9Q6R2W3 1325 aa12.33□□□□□ -0.44
HERC3-202ENST00000402738 RALBP1Q15311 655 aa12.32□□□□□ -0.44
HERC3-202ENST00000402738 FOXD1Q16676 465 aa12.32□□□□□ -0.44
HERC3-202ENST00000402738 PMFBP1Q8TBY8 1022 aa12.32□□□□□ -0.44
HERC3-202ENST00000402738 APBB1O00213 710 aa12.32□□□□□ -0.44
HERC3-202ENST00000402738 RRP1P56182 461 aaKnown RBP12.32□□□□□ -0.44
HERC3-202ENST00000402738 TMF1P82094 1093 aa12.32□□□□□ -0.44
HERC3-202ENST00000402738 DDX49Q9Y6V7 483 aaKnown RBP12.32□□□□□ -0.44
HERC3-202ENST00000402738 DHX57Q6P158 1386 aaKnown RBP12.32□□□□□ -0.44
HERC3-202ENST00000402738 CENPQQ7L2Z9 268 aaPredicted RBP12.31□□□□□ -0.44
HERC3-202ENST00000402738 NAP1L2Q9ULW6 460 aaPredicted RBP12.31□□□□□ -0.44
HERC3-202ENST00000402738 ITPRIPQ8IWB1 547 aa12.3□□□□□ -0.44
HERC3-202ENST00000402738 PDE3BQ13370 1112 aa12.3□□□□□ -0.44
HERC3-202ENST00000402738 CFAP44Q96MT7 982 aa12.29□□□□□ -0.44
HERC3-202ENST00000402738 CRBNQ96SW2 442 aa12.29□□□□□ -0.44
HERC3-202ENST00000402738 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.29□□□□□ -0.44
HERC3-202ENST00000402738 FOXD4L5Q5VV16 416 aaPredicted RBP12.28□□□□□ -0.44
HERC3-202ENST00000402738 FOXD4L4Q8WXT5 416 aaPredicted RBP12.28□□□□□ -0.44
HERC3-202ENST00000402738 CLUAP1Q96AJ1 413 aa12.28□□□□□ -0.44
HERC3-202ENST00000402738 CFDP1Q9UEE9 299 aaPredicted RBP12.28□□□□□ -0.44
HERC3-202ENST00000402738 GOLGA2Q08379 1002 aa12.28□□□□□ -0.44
HERC3-202ENST00000402738 OS9Q13438 667 aaPredicted RBP12.28□□□□□ -0.44
HERC3-202ENST00000402738 SKOR2Q2VWA4 1001 aaPredicted RBP12.28□□□□□ -0.44
HERC3-202ENST00000402738 MSH5O43196 834 aa12.27□□□□□ -0.44
HERC3-202ENST00000402738 PRKRIP1Q9H875 184 aaPredicted RBP12.27□□□□□ -0.45
HERC3-202ENST00000402738 NOL8Q76FK4 1167 aaKnown RBP12.25□□□□□ -0.45
HERC3-202ENST00000402738 R3HCC1Q9Y3T6 440 aaKnown RBP12.25□□□□□ -0.45
HERC3-202ENST00000402738 IPO8O15397 1037 aaKnown RBP12.24□□□□□ -0.45
HERC3-202ENST00000402738 FRAT2O75474 233 aaPredicted RBP12.24□□□□□ -0.45
HERC3-202ENST00000402738 NLRP13Q86W25 1043 aa12.24□□□□□ -0.45
HERC3-202ENST00000402738 PHF14O94880 888 aa12.23□□□□□ -0.45
HERC3-202ENST00000402738 KIF27Q86VH2 1401 aa12.23□□□□□ -0.45
HERC3-202ENST00000402738 MORC1Q86VD1 984 aa12.23□□□□□ -0.45
HERC3-202ENST00000402738 CCDC146Q8IYE0 955 aa12.23□□□□□ -0.45
HERC3-202ENST00000402738 L3MBTL2Q969R5 705 aa12.23□□□□□ -0.45
HERC3-202ENST00000402738 CSPP1Q1MSJ5 1256 aa12.22□□□□□ -0.45
HERC3-202ENST00000402738 ESF1Q9H501 851 aaKnown RBP12.22□□□□□ -0.45
HERC3-202ENST00000402738 CHMP5Q9NZZ3 219 aa12.22□□□□□ -0.45
HERC3-202ENST00000402738 CENPJQ9HC77 1338 aaPredicted RBP12.22□□□□□ -0.45
HERC3-202ENST00000402738 GOLGA6L1Q8N7Z2 621 aa12.22□□□□□ -0.45
HERC3-202ENST00000402738 MRE11P49959 708 aa12.21□□□□□ -0.45
HERC3-202ENST00000402738 RBM10P98175 930 aaKnown RBP12.21□□□□□ -0.45
HERC3-202ENST00000402738 TPM2P07951 284 aa12.21□□□□□ -0.45
HERC3-202ENST00000402738 MAP7D2Q96T17 732 aa12.21□□□□□ -0.46
HERC3-202ENST00000402738 KIAA1211Q6ZU35 1233 aa12.2□□□□□ -0.46
HERC3-202ENST00000402738 MPHOSPH9Q99550 1183 aa12.2□□□□□ -0.46
HERC3-202ENST00000402738 PLEKHG5O94827 1062 aa12.2□□□□□ -0.46
HERC3-202ENST00000402738 SMC4Q9NTJ3 1288 aa12.2□□□□□ -0.46
HERC3-202ENST00000402738 FOXD4L6Q3SYB3 417 aaPredicted RBP12.19□□□□□ -0.46
HERC3-202ENST00000402738 FOXD4L3Q6VB84 417 aaPredicted RBP12.19□□□□□ -0.46
HERC3-202ENST00000402738 ARHGAP35Q9NRY4 1499 aa12.19□□□□□ -0.46
HERC3-202ENST00000402738 ST18O60284 1047 aa12.19□□□□□ -0.46
HERC3-202ENST00000402738 FHAD1B1AJZ9 1412 aa12.19□□□□□ -0.46
HERC3-202ENST00000402738 TULP1O00294 542 aaPredicted RBP12.18□□□□□ -0.46
HERC3-202ENST00000402738 PLEKHD1A6NEE1 506 aa12.18□□□□□ -0.46
HERC3-202ENST00000402738 UBE2Q2Q8WVN8 375 aa12.18□□□□□ -0.46
HERC3-202ENST00000402738 ZNF592Q92610 1267 aa12.18□□□□□ -0.46
HERC3-202ENST00000402738 PKD2Q13563 968 aa12.18□□□□□ -0.46
HERC3-202ENST00000402738 MYBBP1AQ9BQG0 1328 aaKnown RBP12.17□□□□□ -0.46
HERC3-202ENST00000402738 RRP9O43818 475 aaKnown RBP12.17□□□□□ -0.46
HERC3-202ENST00000402738 PLPPR3Q6T4P5 718 aa12.17□□□□□ -0.46
HERC3-202ENST00000402738 MTERF4Q7Z6M4 381 aaKnown RBP12.17□□□□□ -0.46
HERC3-202ENST00000402738 U2AF1L5P0DN76 240 aaPredicted RBP12.17□□□□□ -0.46
HERC3-202ENST00000402738 U2AF1Q01081 240 aaKnown RBP eCLIP12.17□□□□□ -0.46
HERC3-202ENST00000402738 C14orf37Q86TY3 774 aa12.16□□□□□ -0.46
HERC3-202ENST00000402738 HTATSF1O43719 755 aaKnown RBP12.16□□□□□ -0.46
HERC3-202ENST00000402738 COG6Q9Y2V7 657 aa12.16□□□□□ -0.46
HERC3-202ENST00000402738 ROCK2O75116 1388 aaKnown RBP12.16□□□□□ -0.46
HERC3-202ENST00000402738 NASPP49321 788 aaPredicted RBP12.15□□□□□ -0.46
HERC3-202ENST00000402738 TRAK2O60296 914 aa12.15□□□□□ -0.47
HERC3-202ENST00000402738 TPM4P67936 248 aa12.15□□□□□ -0.47
HERC3-202ENST00000402738 BCL2L13Q9BXK5 485 aa12.15□□□□□ -0.47
HERC3-202ENST00000402738 CCDC88BA6NC98 1476 aa12.14□□□□□ -0.47
HERC3-202ENST00000402738 KIF15Q9NS87 1388 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms