RNA–Protein interactions for RNA: ENST00000402259.5

HDAC11-202, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-202ENST00000402259 GPATCH8Q9UKJ3 1502 aaKnown RBP27.21■■□□□ 1.95
HDAC11-202ENST00000402259 KDM6BO15054 1643 aa27.2■■□□□ 1.95
HDAC11-202ENST00000402259 ITSN2Q9NZM3 1697 aa27.2■■□□□ 1.94
HDAC11-202ENST00000402259 CCNB3Q8WWL7 1395 aa27.2■■□□□ 1.94
HDAC11-202ENST00000402259 ARHGAP5Q13017 1502 aa27.18■■□□□ 1.94
HDAC11-202ENST00000402259 EFCAB2Q5VUJ9 269 aa27.17■■□□□ 1.94
HDAC11-202ENST00000402259 AKNAQ7Z591 1439 aa27.16■■□□□ 1.94
HDAC11-202ENST00000402259 COL17A1Q9UMD9 1497 aaPredicted RBP27.12■■□□□ 1.93
HDAC11-202ENST00000402259 ADGRL1O94910 1474 aa27.08■■□□□ 1.93
HDAC11-202ENST00000402259 CFDP1Q9UEE9 299 aaPredicted RBP27.08■■□□□ 1.93
HDAC11-202ENST00000402259 MYOM3Q5VTT5 1437 aa27.06■■□□□ 1.92
HDAC11-202ENST00000402259 ABCC1P33527 1531 aa27.06■■□□□ 1.92
HDAC11-202ENST00000402259 DENND4BO75064 1496 aaPredicted RBP27.05■■□□□ 1.92
HDAC11-202ENST00000402259 SAMD9LQ8IVG5 1584 aa27.05■■□□□ 1.92
HDAC11-202ENST00000402259 PLEKHH2Q8IVE3 1493 aa27.04■■□□□ 1.92
HDAC11-202ENST00000402259 RICTORQ6R327 1708 aa27.03■■□□□ 1.92
HDAC11-202ENST00000402259 MIA2Q96PC5 1412 aa27.03■■□□□ 1.92
HDAC11-202ENST00000402259 SCAPERQ9BY12 1400 aa27.03■■□□□ 1.92
HDAC11-202ENST00000402259 FRMPD1Q5SYB0 1578 aa27.01■■□□□ 1.91
HDAC11-202ENST00000402259 KIAA1107Q9UPP5 1409 aa27■■□□□ 1.91
HDAC11-202ENST00000402259 POGZQ7Z3K3 1410 aa26.99■■□□□ 1.91
HDAC11-202ENST00000402259 ZNF518AQ6AHZ1 1483 aa26.96■■□□□ 1.91
HDAC11-202ENST00000402259 ZNF777Q9ULD5 760 aaPredicted RBP26.96■■□□□ 1.91
HDAC11-202ENST00000402259 ZMYM4Q5VZL5 1548 aa26.95■■□□□ 1.91
HDAC11-202ENST00000402259 ARHGEF12Q9NZN5 1544 aa26.95■■□□□ 1.91
HDAC11-202ENST00000402259 SYCP2Q9BX26 1530 aa26.95■■□□□ 1.9
HDAC11-202ENST00000402259 CAMSAP2Q08AD1 1489 aa26.94■■□□□ 1.9
HDAC11-202ENST00000402259 RAPGEF3O95398 923 aa26.94■■□□□ 1.9
HDAC11-202ENST00000402259 KDM5CP41229 1560 aa26.93■■□□□ 1.9
HDAC11-202ENST00000402259 FGD6Q6ZV73 1430 aa26.92■■□□□ 1.9
HDAC11-202ENST00000402259 MAGI2Q86UL8 1455 aa26.9■■□□□ 1.9
HDAC11-202ENST00000402259 TRAPPC8Q9Y2L5 1435 aa26.9■■□□□ 1.9
HDAC11-202ENST00000402259 ZNF644Q9H582 1327 aaPredicted RBP26.9■■□□□ 1.9
HDAC11-202ENST00000402259 MBD5Q9P267 1494 aa26.89■■□□□ 1.9
HDAC11-202ENST00000402259 PTPN23Q9H3S7 1636 aa26.89■■□□□ 1.9
HDAC11-202ENST00000402259 TCOF1Q13428 1488 aaKnown RBP26.88■■□□□ 1.89
HDAC11-202ENST00000402259 ARHGEF5Q12774 1597 aa26.88■■□□□ 1.89
HDAC11-202ENST00000402259 HNRNPMP52272 730 aaKnown RBP eCLIP26.86■■□□□ 1.89
HDAC11-202ENST00000402259 RSPH4AQ5TD94 716 aa26.86■■□□□ 1.89
HDAC11-202ENST00000402259 PPARGC1BQ86YN6 1023 aaKnown RBP26.84■■□□□ 1.89
HDAC11-202ENST00000402259 AFAP1Q8N556 730 aa26.84■■□□□ 1.89
HDAC11-202ENST00000402259 MLH3Q9UHC1 1453 aa26.84■■□□□ 1.89
HDAC11-202ENST00000402259 HECW2Q9P2P5 1572 aa26.84■■□□□ 1.89
HDAC11-202ENST00000402259 CCDC141Q6ZP82 1450 aa26.82■■□□□ 1.88
HDAC11-202ENST00000402259 ARHGEF40Q8TER5 1519 aa26.82■■□□□ 1.88
HDAC11-202ENST00000402259 ZFYVE16Q7Z3T8 1539 aa26.81■■□□□ 1.88
HDAC11-202ENST00000402259 INO80Q9ULG1 1556 aaPredicted RBP26.78■■□□□ 1.88
HDAC11-202ENST00000402259 KIDINS220Q9ULH0 1771 aa26.76■■□□□ 1.88
HDAC11-202ENST00000402259 RTEL1-TNFRSF6BF6WH68 1400 aa26.75■■□□□ 1.87
HDAC11-202ENST00000402259 SPAG9O60271 1321 aaKnown RBP26.75■■□□□ 1.87
HDAC11-202ENST00000402259 DNMT1P26358 1616 aaKnown RBP26.75■■□□□ 1.87
HDAC11-202ENST00000402259 YEATS2Q9ULM3 1422 aa26.74■■□□□ 1.87
HDAC11-202ENST00000402259 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.74■■□□□ 1.87
HDAC11-202ENST00000402259 ATP7AQ04656 1500 aa26.74■■□□□ 1.87
HDAC11-202ENST00000402259 MAST1Q9Y2H9 1570 aa26.73■■□□□ 1.87
HDAC11-202ENST00000402259 RRBP1Q9P2E9 1410 aaKnown RBP26.73■■□□□ 1.87
HDAC11-202ENST00000402259 CROCC2H7BZ55 1655 aa26.72■■□□□ 1.87
HDAC11-202ENST00000402259 DIP2CQ9Y2E4 1556 aa26.71■■□□□ 1.87
HDAC11-202ENST00000402259 ABCA6Q8N139 1617 aa26.71■■□□□ 1.87
HDAC11-202ENST00000402259 ATP10AO60312 1499 aa26.7■■□□□ 1.87
HDAC11-202ENST00000402259 SHANK2Q9UPX8 1470 aa26.7■■□□□ 1.87
HDAC11-202ENST00000402259 REREQ9P2R6 1566 aa26.7■■□□□ 1.86
HDAC11-202ENST00000402259 ABCC5O15440 1437 aa26.69■■□□□ 1.86
HDAC11-202ENST00000402259 TSPY4P0CV99 314 aa26.69■■□□□ 1.86
HDAC11-202ENST00000402259 TSPY10P0CW01 314 aa26.69■■□□□ 1.86
HDAC11-202ENST00000402259 DAPK1P53355 1430 aa26.69■■□□□ 1.86
HDAC11-202ENST00000402259 FAM50AQ14320 339 aaKnown RBP26.67■■□□□ 1.86
HDAC11-202ENST00000402259 MYT1LQ9UL68 1186 aa26.67■■□□□ 1.86
HDAC11-202ENST00000402259 C9orf84Q5VXU9 1444 aa26.66■■□□□ 1.86
HDAC11-202ENST00000402259 ADGBQ8N7X0 1667 aa26.64■■□□□ 1.86
HDAC11-202ENST00000402259 PLXNC1O60486 1568 aa26.63■■□□□ 1.85
HDAC11-202ENST00000402259 AGLP35573 1532 aa26.59■■□□□ 1.85
HDAC11-202ENST00000402259 A2MP01023 1474 aa26.57■■□□□ 1.84
HDAC11-202ENST00000402259 SIGLEC1Q9BZZ2 1709 aa26.57■■□□□ 1.84
HDAC11-202ENST00000402259 ADGRL2O95490 1459 aa26.56■■□□□ 1.84
HDAC11-202ENST00000402259 DHX29Q7Z478 1369 aaKnown RBP26.53■■□□□ 1.84
HDAC11-202ENST00000402259 ANKRD30AQ9BXX3 1397 aa26.52■■□□□ 1.84
HDAC11-202ENST00000402259 BCORL1Q5H9F3 1711 aa26.51■■□□□ 1.83
HDAC11-202ENST00000402259 PTPRKQ15262 1439 aa26.5■■□□□ 1.83
HDAC11-202ENST00000402259 NCOA1Q15788 1441 aa26.5■■□□□ 1.83
HDAC11-202ENST00000402259 DUOX2Q9NRD8 1548 aa26.49■■□□□ 1.83
HDAC11-202ENST00000402259 ARID4BQ4LE39 1312 aaPredicted RBP26.49■■□□□ 1.83
HDAC11-202ENST00000402259 ROCK1Q13464 1354 aa26.48■■□□□ 1.83
HDAC11-202ENST00000402259 KIF15Q9NS87 1388 aa26.47■■□□□ 1.83
HDAC11-202ENST00000402259 EIF2AK4Q9P2K8 1649 aaKnown RBP26.46■■□□□ 1.83
HDAC11-202ENST00000402259 ADAMTSL3P82987 1691 aa26.45■■□□□ 1.82
HDAC11-202ENST00000402259 CHIC2Q9UKJ5 165 aa26.45■■□□□ 1.82
HDAC11-202ENST00000402259 ERBINQ96RT1 1412 aa26.43■■□□□ 1.82
HDAC11-202ENST00000402259 RRP7BPQ9NSQ0 103 aa26.41■■□□□ 1.82
HDAC11-202ENST00000402259 ITGAEP38570 1179 aa26.4■■□□□ 1.82
HDAC11-202ENST00000402259 RNF17Q9BXT8 1623 aaKnown RBP26.37■■□□□ 1.81
HDAC11-202ENST00000402259 KDM4FA0A1W2PPD8 638 aa26.37■■□□□ 1.81
HDAC11-202ENST00000402259 FER1L4A9Z1Z3 1794 aa26.35■■□□□ 1.81
HDAC11-202ENST00000402259 MADDQ8WXG6 1647 aa26.35■■□□□ 1.81
HDAC11-202ENST00000402259 FAM135AQ9P2D6 1515 aa26.34■■□□□ 1.81
HDAC11-202ENST00000402259 KIF3BO15066 747 aa26.34■■□□□ 1.81
HDAC11-202ENST00000402259 PPP6R1Q9UPN7 881 aa26.34■■□□□ 1.81
HDAC11-202ENST00000402259 ANKRD50Q9ULJ7 1429 aa26.33■■□□□ 1.81
HDAC11-202ENST00000402259 MLECQ14165 292 aa26.33■■□□□ 1.81
HDAC11-202ENST00000402259 GCC2Q8IWJ2 1684 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms