RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 MORC1Q86VD1 984 aa21.39■■□□□ 1.02
TSC2-204ENST00000401874 FOXD1Q16676 465 aa21.38■■□□□ 1.01
TSC2-204ENST00000401874 CFAP44Q96MT7 982 aa21.38■■□□□ 1.01
TSC2-204ENST00000401874 ROCK2O75116 1388 aaKnown RBP21.37■■□□□ 1.01
TSC2-204ENST00000401874 ANKRD30AQ9BXX3 1397 aa21.35■■□□□ 1.01
TSC2-204ENST00000401874 DHX57Q6P158 1386 aaKnown RBP21.34■■□□□ 1.01
TSC2-204ENST00000401874 CDK11BP21127 795 aaKnown RBP21.34■■□□□ 1.01
TSC2-204ENST00000401874 RAPGEF2Q9Y4G8 1499 aa21.34■■□□□ 1.01
TSC2-204ENST00000401874 CARMIL2Q6F5E8 1435 aa21.32■■□□□ 1
TSC2-204ENST00000401874 NUP155O75694 1391 aa21.31■■□□□ 1
TSC2-204ENST00000401874 HAP1P54257 671 aaPredicted RBP21.3■■□□□ 1
TSC2-204ENST00000401874 PLEKHG5O94827 1062 aa21.29■■□□□ 1
TSC2-204ENST00000401874 ARID4BQ4LE39 1312 aaPredicted RBP21.29■■□□□ 1
TSC2-204ENST00000401874 L3MBTL2Q969R5 705 aa21.29■■□□□ 1
TSC2-204ENST00000401874 IPO8O15397 1037 aaKnown RBP21.28■■□□□ 1
TSC2-204ENST00000401874 PDE3BQ13370 1112 aa21.28■■□□□ 1
TSC2-204ENST00000401874 TPRNQ4KMQ1 711 aa21.28■■□□□ 1
TSC2-204ENST00000401874 SRPK2P78362 688 aaKnown RBP21.27■■□□□ 1
TSC2-204ENST00000401874 MCCP23508 829 aa21.26■□□□□ 0.99
TSC2-204ENST00000401874 OS9Q13438 667 aaPredicted RBP21.26■□□□□ 0.99
TSC2-204ENST00000401874 IPO9Q96P70 1041 aaKnown RBP21.26■□□□□ 0.99
TSC2-204ENST00000401874 PTMSP20962 102 aa21.26■□□□□ 0.99
TSC2-204ENST00000401874 RWDD1Q9H446 243 aaPredicted RBP21.26■□□□□ 0.99
TSC2-204ENST00000401874 GOLGA6L6A8MZA4 724 aa21.25■□□□□ 0.99
TSC2-204ENST00000401874 A0A0G2JS52 829 aa21.24■□□□□ 0.99
TSC2-204ENST00000401874 FHOD3Q2V2M9 1422 aa21.24■□□□□ 0.99
TSC2-204ENST00000401874 PDS5BQ9NTI5 1447 aa21.24■□□□□ 0.99
TSC2-204ENST00000401874 PLCB2Q00722 1185 aa21.24■□□□□ 0.99
TSC2-204ENST00000401874 EIF3AQ14152 1382 aaKnown RBP21.24■□□□□ 0.99
TSC2-204ENST00000401874 NLRP13Q86W25 1043 aa21.23■□□□□ 0.99
TSC2-204ENST00000401874 MSNP26038 577 aaKnown RBP21.21■□□□□ 0.99
TSC2-204ENST00000401874 PMFBP1Q8TBY8 1022 aa21.21■□□□□ 0.99
TSC2-204ENST00000401874 PHLDB1Q86UU1 1377 aa21.21■□□□□ 0.99
TSC2-204ENST00000401874 KCNJ4P48050 445 aa21.21■□□□□ 0.99
TSC2-204ENST00000401874 CCDC18Q5T9S5 1454 aa21.21■□□□□ 0.99
TSC2-204ENST00000401874 CALD1Q05682 793 aaKnown RBP21.2■□□□□ 0.98
TSC2-204ENST00000401874 GBP4Q96PP9 640 aa21.2■□□□□ 0.98
TSC2-204ENST00000401874 TDRD9Q8NDG6 1382 aaKnown RBP21.2■□□□□ 0.98
TSC2-204ENST00000401874 HDGFP51858 240 aaKnown RBP21.2■□□□□ 0.98
TSC2-204ENST00000401874 SPRYD3Q8NCJ5 442 aa21.19■□□□□ 0.98
TSC2-204ENST00000401874 HDGFL2Q7Z4V5 671 aaPredicted RBP21.19■□□□□ 0.98
TSC2-204ENST00000401874 FGD1P98174 961 aa21.18■□□□□ 0.98
TSC2-204ENST00000401874 GOLGA2Q08379 1002 aa21.18■□□□□ 0.98
TSC2-204ENST00000401874 KIF15Q9NS87 1388 aa21.18■□□□□ 0.98
TSC2-204ENST00000401874 NRDCO43847 1150 aa21.17■□□□□ 0.98
TSC2-204ENST00000401874 GOLGA6L4A6NEF3 574 aa21.16■□□□□ 0.98
TSC2-204ENST00000401874 U2AF1L5P0DN76 240 aaPredicted RBP21.15■□□□□ 0.98
TSC2-204ENST00000401874 U2AF1Q01081 240 aaKnown RBP eCLIP21.15■□□□□ 0.98
TSC2-204ENST00000401874 CHAF1AQ13111 956 aaPredicted RBP21.15■□□□□ 0.98
TSC2-204ENST00000401874 ITPRIPQ8IWB1 547 aa21.14■□□□□ 0.97
TSC2-204ENST00000401874 MYBBP1AQ9BQG0 1328 aaKnown RBP21.13■□□□□ 0.97
TSC2-204ENST00000401874 EFCAB2Q5VUJ9 269 aa21.13■□□□□ 0.97
TSC2-204ENST00000401874 SMARCA4P51532 1647 aa21.13■□□□□ 0.97
TSC2-204ENST00000401874 RSPH4AQ5TD94 716 aa21.13■□□□□ 0.97
TSC2-204ENST00000401874 CADPSQ9ULU8 1353 aa21.12■□□□□ 0.97
TSC2-204ENST00000401874 RUSC2Q8N2Y8 1516 aa21.12■□□□□ 0.97
TSC2-204ENST00000401874 SAFB2Q14151 953 aaKnown RBP eCLIP21.12■□□□□ 0.97
TSC2-204ENST00000401874 RTF1Q92541 710 aaKnown RBP21.11■□□□□ 0.97
TSC2-204ENST00000401874 SLKQ9H2G2 1235 aaPredicted RBP21.1■□□□□ 0.97
TSC2-204ENST00000401874 ZBED9Q6R2W3 1325 aa21.09■□□□□ 0.97
TSC2-204ENST00000401874 LMOD2Q6P5Q4 547 aa21.08■□□□□ 0.96
TSC2-204ENST00000401874 PRKRIP1Q9H875 184 aaPredicted RBP21.08■□□□□ 0.96
TSC2-204ENST00000401874 ATAD2BQ9ULI0 1458 aa21.08■□□□□ 0.96
TSC2-204ENST00000401874 GGT6Q6P531 493 aa21.07■□□□□ 0.96
TSC2-204ENST00000401874 CENPJQ9HC77 1338 aaPredicted RBP21.07■□□□□ 0.96
TSC2-204ENST00000401874 STK26Q9P289 416 aa21.06■□□□□ 0.96
TSC2-204ENST00000401874 USP35Q9P2H5 1018 aa21.05■□□□□ 0.96
TSC2-204ENST00000401874 SMC4Q9NTJ3 1288 aa21.04■□□□□ 0.96
TSC2-204ENST00000401874 NAP1L2Q9ULW6 460 aaPredicted RBP21.04■□□□□ 0.96
TSC2-204ENST00000401874 GOLGA6L3A6NEY3 463 aa21.03■□□□□ 0.96
TSC2-204ENST00000401874 MFAP1P55081 439 aaKnown RBP21.03■□□□□ 0.96
TSC2-204ENST00000401874 KIAA1211Q6ZU35 1233 aa21.03■□□□□ 0.96
TSC2-204ENST00000401874 HNRNPMP52272 730 aaKnown RBP eCLIP21.02■□□□□ 0.961e-7■■■■□ 25.8
TSC2-204ENST00000401874 CENPQQ7L2Z9 268 aaPredicted RBP21.02■□□□□ 0.95
TSC2-204ENST00000401874 GZF1Q9H116 711 aaPredicted RBP21.01■□□□□ 0.95
TSC2-204ENST00000401874 CCDC146Q8IYE0 955 aa21■□□□□ 0.95
TSC2-204ENST00000401874 SYAP1Q96A49 352 aaPredicted RBP21■□□□□ 0.95
TSC2-204ENST00000401874 SOX12O15370 315 aa21■□□□□ 0.95
TSC2-204ENST00000401874 APBB1O00213 710 aa20.99■□□□□ 0.95
TSC2-204ENST00000401874 TERF2IPQ9NYB0 399 aa20.99■□□□□ 0.95
TSC2-204ENST00000401874 FANCIQ9NVI1 1328 aa20.99■□□□□ 0.95
TSC2-204ENST00000401874 ST20-MTHFSA0A0A6YYL1 179 aa20.99■□□□□ 0.95
TSC2-204ENST00000401874 DRC7Q8IY82 874 aa20.99■□□□□ 0.95
TSC2-204ENST00000401874 RRP1P56182 461 aaKnown RBP20.99■□□□□ 0.95
TSC2-204ENST00000401874 CCDC144AA2RUR9 1427 aa20.98■□□□□ 0.95
TSC2-204ENST00000401874 CHMP4AQ9BY43 222 aa20.97■□□□□ 0.95
TSC2-204ENST00000401874 PDE4AP27815 886 aa20.97■□□□□ 0.95
TSC2-204ENST00000401874 USP47Q96K76 1375 aa20.97■□□□□ 0.95
TSC2-204ENST00000401874 KIAA2012Q0VF49 1180 aa20.96■□□□□ 0.95
TSC2-204ENST00000401874 FAM161AQ3B820 660 aa20.95■□□□□ 0.95
TSC2-204ENST00000401874 KIF3BO15066 747 aa20.95■□□□□ 0.94
TSC2-204ENST00000401874 HMMRO75330 724 aa20.95■□□□□ 0.94
TSC2-204ENST00000401874 PANK3Q9H999 370 aa20.95■□□□□ 0.94
TSC2-204ENST00000401874 TAOK2Q9UL54 1235 aa20.95■□□□□ 0.94
TSC2-204ENST00000401874 SPAG9O60271 1321 aaKnown RBP20.93■□□□□ 0.94
TSC2-204ENST00000401874 LMOD3Q0VAK6 560 aa20.93■□□□□ 0.94
TSC2-204ENST00000401874 CLUAP1Q96AJ1 413 aa20.93■□□□□ 0.94
TSC2-204ENST00000401874 MLECQ14165 292 aa20.92■□□□□ 0.94
TSC2-204ENST00000401874 HTATSF1O43719 755 aaKnown RBP20.92■□□□□ 0.94
TSC2-204ENST00000401874 STK31Q9BXU1 1019 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms