RNA–Protein interactions for RNA: ENST00000401596.1

CNN3P1-201, Transcript of calponin 3 pseudogene 1, humanhuman

BASIC

Gene CNN3P1, Length 935 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3P1-201ENST00000401596 CCDC18Q5T9S5 1454 aa11.28□□□□□ -0.6
CNN3P1-201ENST00000401596 HECW1Q76N89 1606 aa11.27□□□□□ -0.6
CNN3P1-201ENST00000401596 JPH4Q96JJ6 628 aa11.26□□□□□ -0.61
CNN3P1-201ENST00000401596 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.26□□□□□ -0.61
CNN3P1-201ENST00000401596 SAMD1Q6SPF0 538 aaPredicted RBP11.25□□□□□ -0.61
CNN3P1-201ENST00000401596 EPRSP07814 1512 aaKnown RBP11.25□□□□□ -0.61
CNN3P1-201ENST00000401596 ZBTB22O15209 634 aa11.24□□□□□ -0.61
CNN3P1-201ENST00000401596 TTBK1Q5TCY1 1321 aaPredicted RBP11.24□□□□□ -0.61
CNN3P1-201ENST00000401596 PHLDB1Q86UU1 1377 aa11.24□□□□□ -0.61
CNN3P1-201ENST00000401596 CCNB3Q8WWL7 1395 aa11.24□□□□□ -0.61
CNN3P1-201ENST00000401596 CARMIL2Q6F5E8 1435 aa11.24□□□□□ -0.61
CNN3P1-201ENST00000401596 EHBP1L1Q8N3D4 1523 aa11.24□□□□□ -0.61
CNN3P1-201ENST00000401596 CERKQ8TCT0 537 aa11.23□□□□□ -0.61
CNN3P1-201ENST00000401596 FOXD4L1Q9NU39 408 aa11.23□□□□□ -0.61
CNN3P1-201ENST00000401596 COL17A1Q9UMD9 1497 aaPredicted RBP11.23□□□□□ -0.61
CNN3P1-201ENST00000401596 RAPGEF6Q8TEU7 1601 aa11.23□□□□□ -0.61
CNN3P1-201ENST00000401596 ZEB1P37275 1124 aaPredicted RBP11.22□□□□□ -0.61
CNN3P1-201ENST00000401596 NUP153P49790 1475 aaKnown RBP11.22□□□□□ -0.61
CNN3P1-201ENST00000401596 MAGI3Q5TCQ9 1506 aa11.22□□□□□ -0.61
CNN3P1-201ENST00000401596 ABCA8O94911 1581 aa11.21□□□□□ -0.61
CNN3P1-201ENST00000401596 NCOA2Q15596 1464 aa11.19□□□□□ -0.62
CNN3P1-201ENST00000401596 SUPT6HQ7KZ85 1726 aaKnown RBP11.18□□□□□ -0.62
CNN3P1-201ENST00000401596 MTUS2Q5JR59 1369 aa11.17□□□□□ -0.62
CNN3P1-201ENST00000401596 POTEHQ6S545 545 aa11.17□□□□□ -0.62
CNN3P1-201ENST00000401596 CDK13Q14004 1512 aaKnown RBP11.16□□□□□ -0.62
CNN3P1-201ENST00000401596 FGD6Q6ZV73 1430 aa11.16□□□□□ -0.62
CNN3P1-201ENST00000401596 TCOF1Q13428 1488 aaKnown RBP11.15□□□□□ -0.62
CNN3P1-201ENST00000401596 PLB1Q6P1J6 1458 aa11.15□□□□□ -0.62
CNN3P1-201ENST00000401596 MYOM3Q5VTT5 1437 aa11.15□□□□□ -0.62
CNN3P1-201ENST00000401596 GLI2P10070 1586 aa11.15□□□□□ -0.62
CNN3P1-201ENST00000401596 MYCNP04198 464 aaPredicted RBP11.14□□□□□ -0.63
CNN3P1-201ENST00000401596 ATP1B4Q9UN42 357 aaPredicted RBP11.14□□□□□ -0.63
CNN3P1-201ENST00000401596 MIA2Q96PC5 1412 aa11.13□□□□□ -0.63
CNN3P1-201ENST00000401596 PTPRMP28827 1452 aa11.12□□□□□ -0.63
CNN3P1-201ENST00000401596 TEX14Q8IWB6 1497 aa11.12□□□□□ -0.63
CNN3P1-201ENST00000401596 PTPRGP23470 1445 aa11.11□□□□□ -0.63
CNN3P1-201ENST00000401596 TROQ12816 1431 aaPredicted RBP11.11□□□□□ -0.63
CNN3P1-201ENST00000401596 ATP10BO94823 1461 aa11.11□□□□□ -0.63
CNN3P1-201ENST00000401596 ASXL2Q76L83 1435 aa11.1□□□□□ -0.63
CNN3P1-201ENST00000401596 MAP3K4Q9Y6R4 1608 aa11.1□□□□□ -0.63
CNN3P1-201ENST00000401596 UACAQ9BZF9 1416 aa11.09□□□□□ -0.63
CNN3P1-201ENST00000401596 UHRF1BP1LA0JNW5 1464 aa11.08□□□□□ -0.64
CNN3P1-201ENST00000401596 HSPA2P54652 639 aa11.08□□□□□ -0.64
CNN3P1-201ENST00000401596 CDK11AQ9UQ88 783 aaPredicted RBP11.08□□□□□ -0.64
CNN3P1-201ENST00000401596 PTPN23Q9H3S7 1636 aa11.08□□□□□ -0.64
CNN3P1-201ENST00000401596 CLSPNQ9HAW4 1339 aa11.08□□□□□ -0.64
CNN3P1-201ENST00000401596 ABCC2Q92887 1545 aa11.06□□□□□ -0.64
CNN3P1-201ENST00000401596 ADAMTSL3P82987 1691 aa11.06□□□□□ -0.64
CNN3P1-201ENST00000401596 CCER1Q8TC90 406 aaPredicted RBP11.06□□□□□ -0.64
CNN3P1-201ENST00000401596 PTPRKQ15262 1439 aa11.06□□□□□ -0.64
CNN3P1-201ENST00000401596 DHX57Q6P158 1386 aaKnown RBP11.05□□□□□ -0.64
CNN3P1-201ENST00000401596 POLA2Q14181 598 aa11.05□□□□□ -0.64
CNN3P1-201ENST00000401596 SETD5Q9C0A6 1442 aa11.05□□□□□ -0.64
CNN3P1-201ENST00000401596 AKNAQ7Z591 1439 aa11.04□□□□□ -0.64
CNN3P1-201ENST00000401596 GPATCH8Q9UKJ3 1502 aaKnown RBP11.03□□□□□ -0.64
CNN3P1-201ENST00000401596 RAB3GAP2Q9H2M9 1393 aa11.03□□□□□ -0.64
CNN3P1-201ENST00000401596 KIF14Q15058 1648 aa11.02□□□□□ -0.64
CNN3P1-201ENST00000401596 HFM1A2PYH4 1435 aa11.02□□□□□ -0.64
CNN3P1-201ENST00000401596 FAM50AQ14320 339 aaKnown RBP11.02□□□□□ -0.65
CNN3P1-201ENST00000401596 KDM5BQ9UGL1 1544 aa11.02□□□□□ -0.65
CNN3P1-201ENST00000401596 ITSN2Q9NZM3 1697 aa11.01□□□□□ -0.65
CNN3P1-201ENST00000401596 MADDQ8WXG6 1647 aa11.01□□□□□ -0.65
CNN3P1-201ENST00000401596 PLEKHD1A6NEE1 506 aa11□□□□□ -0.65
CNN3P1-201ENST00000401596 DNMT1P26358 1616 aaKnown RBP10.99□□□□□ -0.65
CNN3P1-201ENST00000401596 NAIPQ13075 1403 aa10.99□□□□□ -0.65
CNN3P1-201ENST00000401596 ROCK1Q13464 1354 aa10.98□□□□□ -0.65
CNN3P1-201ENST00000401596 RIMS1Q86UR5 1692 aaKnown RBP10.98□□□□□ -0.65
CNN3P1-201ENST00000401596 CDC42BPAQ5VT25 1732 aa10.98□□□□□ -0.65
CNN3P1-201ENST00000401596 ARID3CA6NKF2 412 aa10.97□□□□□ -0.65
CNN3P1-201ENST00000401596 ABCC5O15440 1437 aa10.97□□□□□ -0.65
CNN3P1-201ENST00000401596 BCORL1Q5H9F3 1711 aa10.96□□□□□ -0.65
CNN3P1-201ENST00000401596 GCC2Q8IWJ2 1684 aa10.96□□□□□ -0.65
CNN3P1-201ENST00000401596 DAPK1P53355 1430 aa10.96□□□□□ -0.65
CNN3P1-201ENST00000401596 ZCCHC11Q5TAX3 1644 aaKnown RBP10.95□□□□□ -0.66
CNN3P1-201ENST00000401596 ITGAEP38570 1179 aa10.95□□□□□ -0.66
CNN3P1-201ENST00000401596 RBM42Q9BTD8 480 aaKnown RBP10.95□□□□□ -0.66
CNN3P1-201ENST00000401596 ATF5Q9Y2D1 282 aaPredicted RBP10.95□□□□□ -0.66
CNN3P1-201ENST00000401596 ADGRL2O95490 1459 aa10.94□□□□□ -0.66
CNN3P1-201ENST00000401596 CAMSAP2Q08AD1 1489 aa10.94□□□□□ -0.66
CNN3P1-201ENST00000401596 PREX2Q70Z35 1606 aa10.94□□□□□ -0.66
CNN3P1-201ENST00000401596 ACIN1Q9UKV3 1341 aaKnown RBP10.93□□□□□ -0.66
CNN3P1-201ENST00000401596 ARHGEF5Q12774 1597 aa10.93□□□□□ -0.66
CNN3P1-201ENST00000401596 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.93□□□□□ -0.66
CNN3P1-201ENST00000401596 SHANK2Q9UPX8 1470 aa10.93□□□□□ -0.66
CNN3P1-201ENST00000401596 CROCC2H7BZ55 1655 aa10.92□□□□□ -0.66
CNN3P1-201ENST00000401596 ARID4BQ4LE39 1312 aaPredicted RBP10.92□□□□□ -0.66
CNN3P1-201ENST00000401596 CDC42BPBQ9Y5S2 1711 aa10.92□□□□□ -0.66
CNN3P1-201ENST00000401596 ZNF644Q9H582 1327 aaPredicted RBP10.91□□□□□ -0.66
CNN3P1-201ENST00000401596 ARAP3Q8WWN8 1544 aa10.91□□□□□ -0.66
CNN3P1-201ENST00000401596 CFDP1Q9UEE9 299 aaPredicted RBP10.91□□□□□ -0.66
CNN3P1-201ENST00000401596 MBD5Q9P267 1494 aa10.91□□□□□ -0.66
CNN3P1-201ENST00000401596 TTC37Q6PGP7 1564 aa10.9□□□□□ -0.67
CNN3P1-201ENST00000401596 KIAA1107Q9UPP5 1409 aa10.89□□□□□ -0.67
CNN3P1-201ENST00000401596 SAMD9LQ8IVG5 1584 aa10.89□□□□□ -0.67
CNN3P1-201ENST00000401596 ADGBQ8N7X0 1667 aa10.89□□□□□ -0.67
CNN3P1-201ENST00000401596 PLCH2O75038 1416 aa10.88□□□□□ -0.67
CNN3P1-201ENST00000401596 NCOA1Q15788 1441 aa10.88□□□□□ -0.67
CNN3P1-201ENST00000401596 MED1Q15648 1581 aaPredicted RBP10.87□□□□□ -0.67
CNN3P1-201ENST00000401596 MAST1Q9Y2H9 1570 aa10.87□□□□□ -0.67
CNN3P1-201ENST00000401596 CD109Q6YHK3 1445 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms