RNA–Protein interactions for RNA: ENST00000400790.3

ARID1B-204, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 3

Gene ARID1B, Length 2,887 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-204ENST00000400790 NCOA1Q15788 1441 aa17.19■□□□□ 0.34
ARID1B-204ENST00000400790 RPRD2Q5VT52 1461 aaKnown RBP17.19■□□□□ 0.34
ARID1B-204ENST00000400790 L3MBTL2Q969R5 705 aa17.19■□□□□ 0.34
ARID1B-204ENST00000400790 DAPK1P53355 1430 aa17.19■□□□□ 0.34
ARID1B-204ENST00000400790 ANKRD30BQ9BXX2 1392 aa17.17■□□□□ 0.34
ARID1B-204ENST00000400790 KIAA0556O60303 1618 aa17.16■□□□□ 0.34
ARID1B-204ENST00000400790 TEX14Q8IWB6 1497 aa17.15■□□□□ 0.34
ARID1B-204ENST00000400790 CCDC7Q96M83 1385 aa17.15■□□□□ 0.34
ARID1B-204ENST00000400790 SALL2Q9Y467 1007 aaPredicted RBP17.15■□□□□ 0.34
ARID1B-204ENST00000400790 ABCC5O15440 1437 aa17.14■□□□□ 0.33
ARID1B-204ENST00000400790 MRC2Q9UBG0 1479 aa17.14■□□□□ 0.33
ARID1B-204ENST00000400790 ERICH6BQ5W0A0 696 aa17.14■□□□□ 0.33
ARID1B-204ENST00000400790 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.33
ARID1B-204ENST00000400790 RAPGEF6Q8TEU7 1601 aa17.13■□□□□ 0.33
ARID1B-204ENST00000400790 KIAA0586Q9BVV6 1533 aa17.12■□□□□ 0.33
ARID1B-204ENST00000400790 DISP1Q96F81 1524 aa17.12■□□□□ 0.33
ARID1B-204ENST00000400790 UBE2Q2Q8WVN8 375 aa17.11■□□□□ 0.33
ARID1B-204ENST00000400790 PRKRIP1Q9H875 184 aaPredicted RBP17.11■□□□□ 0.33
ARID1B-204ENST00000400790 FOXD1Q16676 465 aa17.11■□□□□ 0.33
ARID1B-204ENST00000400790 NUP153P49790 1475 aaKnown RBP17.11■□□□□ 0.33
ARID1B-204ENST00000400790 SPATA31E1Q6ZUB1 1445 aa17.11■□□□□ 0.33
ARID1B-204ENST00000400790 C11orf95C9JLR9 678 aaPredicted RBP17.11■□□□□ 0.33
ARID1B-204ENST00000400790 DEKP35659 375 aaKnown RBP17.11■□□□□ 0.33
ARID1B-204ENST00000400790 ADGBQ8N7X0 1667 aa17.09■□□□□ 0.33
ARID1B-204ENST00000400790 NBPF8Q3BBV2 869 aa17.09■□□□□ 0.33
ARID1B-204ENST00000400790 ITSN2Q9NZM3 1697 aa17.08■□□□□ 0.33
ARID1B-204ENST00000400790 IFT140Q96RY7 1462 aa17.08■□□□□ 0.33
ARID1B-204ENST00000400790 CCDC136Q96JN2 1154 aa17.07■□□□□ 0.32
ARID1B-204ENST00000400790 ARID3CA6NKF2 412 aa17.07■□□□□ 0.32
ARID1B-204ENST00000400790 CCDC184Q52MB2 194 aa17.07■□□□□ 0.32
ARID1B-204ENST00000400790 CDK11AQ9UQ88 783 aaPredicted RBP17.07■□□□□ 0.32
ARID1B-204ENST00000400790 SLC4A1APQ9BWU0 796 aaKnown RBP17.06■□□□□ 0.32
ARID1B-204ENST00000400790 MYT1LQ9UL68 1186 aa17.05■□□□□ 0.32
ARID1B-204ENST00000400790 ZBED9Q6R2W3 1325 aa17.04■□□□□ 0.32
ARID1B-204ENST00000400790 ZNF608Q9ULD9 1512 aaPredicted RBP17.04■□□□□ 0.32
ARID1B-204ENST00000400790 CROCC2H7BZ55 1655 aa17.04■□□□□ 0.32
ARID1B-204ENST00000400790 KIF7Q2M1P5 1343 aa17.04■□□□□ 0.32
ARID1B-204ENST00000400790 ZNF644Q9H582 1327 aaPredicted RBP17.04■□□□□ 0.32
ARID1B-204ENST00000400790 PZPP20742 1482 aa17.04■□□□□ 0.32
ARID1B-204ENST00000400790 ADCY10Q96PN6 1610 aa17.03■□□□□ 0.32
ARID1B-204ENST00000400790 MRS2Q9HD23 443 aa17.03■□□□□ 0.32
ARID1B-204ENST00000400790 TROQ12816 1431 aaPredicted RBP17.02■□□□□ 0.32
ARID1B-204ENST00000400790 IRX6P78412 446 aaPredicted RBP17.02■□□□□ 0.32
ARID1B-204ENST00000400790 CAMSAP2Q08AD1 1489 aa17.02■□□□□ 0.32
ARID1B-204ENST00000400790 GRIN2AQ12879 1464 aa17.02■□□□□ 0.32
ARID1B-204ENST00000400790 PPP4R2Q9NY27 417 aa17.02■□□□□ 0.31
ARID1B-204ENST00000400790 MBD5Q9P267 1494 aa17.01■□□□□ 0.31
ARID1B-204ENST00000400790 ADGRL2O95490 1459 aa17.01■□□□□ 0.31
ARID1B-204ENST00000400790 FAM9BQ8IZU0 186 aa17■□□□□ 0.31
ARID1B-204ENST00000400790 FANCIQ9NVI1 1328 aa17■□□□□ 0.31
ARID1B-204ENST00000400790 KIF14Q15058 1648 aa16.98■□□□□ 0.31
ARID1B-204ENST00000400790 EIF4G3O43432 1585 aaKnown RBP16.98■□□□□ 0.31
ARID1B-204ENST00000400790 KIAA1107Q9UPP5 1409 aa16.97■□□□□ 0.31
ARID1B-204ENST00000400790 GPATCH8Q9UKJ3 1502 aaKnown RBP16.97■□□□□ 0.31
ARID1B-204ENST00000400790 PRG4Q92954 1404 aaPredicted RBP16.97■□□□□ 0.31
ARID1B-204ENST00000400790 BCORL1Q5H9F3 1711 aa16.97■□□□□ 0.31
ARID1B-204ENST00000400790 CFDP1Q9UEE9 299 aaPredicted RBP16.96■□□□□ 0.31
ARID1B-204ENST00000400790 KDM5CP41229 1560 aa16.95■□□□□ 0.3
ARID1B-204ENST00000400790 ARID4BQ4LE39 1312 aaPredicted RBP16.94■□□□□ 0.3
ARID1B-204ENST00000400790 DHX29Q7Z478 1369 aaKnown RBP16.93■□□□□ 0.3
ARID1B-204ENST00000400790 MAGI1Q96QZ7 1491 aaPredicted RBP16.92■□□□□ 0.3
ARID1B-204ENST00000400790 USP47Q96K76 1375 aa16.92■□□□□ 0.3
ARID1B-204ENST00000400790 ANKRD30AQ9BXX3 1397 aa16.92■□□□□ 0.3
ARID1B-204ENST00000400790 CDC42BPAQ5VT25 1732 aa16.91■□□□□ 0.3
ARID1B-204ENST00000400790 PLB1Q6P1J6 1458 aa16.91■□□□□ 0.3
ARID1B-204ENST00000400790 CEP170Q5SW79 1584 aa16.91■□□□□ 0.3
ARID1B-204ENST00000400790 UHRF1BP1Q6BDS2 1440 aa16.9■□□□□ 0.3
ARID1B-204ENST00000400790 SMG6Q86US8 1419 aaKnown RBP16.89■□□□□ 0.29
ARID1B-204ENST00000400790 ANKRD50Q9ULJ7 1429 aa16.88■□□□□ 0.29
ARID1B-204ENST00000400790 PKD2Q13563 968 aa16.88■□□□□ 0.29
ARID1B-204ENST00000400790 SHANK2Q9UPX8 1470 aa16.88■□□□□ 0.29
ARID1B-204ENST00000400790 SYNJ2O15056 1496 aa16.87■□□□□ 0.29
ARID1B-204ENST00000400790 RALGAPBQ86X10 1494 aa16.87■□□□□ 0.29
ARID1B-204ENST00000400790 ARHGEF12Q9NZN5 1544 aa16.87■□□□□ 0.29
ARID1B-204ENST00000400790 ROCK2O75116 1388 aaKnown RBP16.86■□□□□ 0.29
ARID1B-204ENST00000400790 CARMIL2Q6F5E8 1435 aa16.86■□□□□ 0.29
ARID1B-204ENST00000400790 KDM5DQ9BY66 1539 aa16.86■□□□□ 0.29
ARID1B-204ENST00000400790 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.86■□□□□ 0.29
ARID1B-204ENST00000400790 ZNF777Q9ULD5 760 aaPredicted RBP16.85■□□□□ 0.29
ARID1B-204ENST00000400790 B4GALNT3Q6L9W6 998 aa16.84■□□□□ 0.29
ARID1B-204ENST00000400790 EIF5BO60841 1220 aaKnown RBP16.83■□□□□ 0.29
ARID1B-204ENST00000400790 ABCC10Q5T3U5 1492 aa16.83■□□□□ 0.28
ARID1B-204ENST00000400790 RNF123Q5XPI4 1314 aa16.82■□□□□ 0.28
ARID1B-204ENST00000400790 CHMP7Q8WUX9 453 aaPredicted RBP16.82■□□□□ 0.28
ARID1B-204ENST00000400790 NUDCQ9Y266 331 aa16.82■□□□□ 0.28
ARID1B-204ENST00000400790 ABCA8O94911 1581 aa16.82■□□□□ 0.28
ARID1B-204ENST00000400790 NUP160Q12769 1436 aa16.82■□□□□ 0.28
ARID1B-204ENST00000400790 ZNF326Q5BKZ1 582 aaKnown RBP16.81■□□□□ 0.28
ARID1B-204ENST00000400790 C9orf84Q5VXU9 1444 aa16.81■□□□□ 0.28
ARID1B-204ENST00000400790 NUP155O75694 1391 aa16.8■□□□□ 0.28
ARID1B-204ENST00000400790 E9PCH4 1651 aa16.79■□□□□ 0.28
ARID1B-204ENST00000400790 PLEKHD1A6NEE1 506 aa16.79■□□□□ 0.28
ARID1B-204ENST00000400790 JPH4Q96JJ6 628 aa16.79■□□□□ 0.28
ARID1B-204ENST00000400790 ARHGEF5Q12774 1597 aa16.78■□□□□ 0.28
ARID1B-204ENST00000400790 PNISRQ8TF01 805 aaKnown RBP16.78■□□□□ 0.28
ARID1B-204ENST00000400790 PTPRGP23470 1445 aa16.78■□□□□ 0.28
ARID1B-204ENST00000400790 POLR3GLQ9BT43 218 aa16.78■□□□□ 0.28
ARID1B-204ENST00000400790 KTN1Q86UP2 1357 aaKnown RBP16.77■□□□□ 0.28
ARID1B-204ENST00000400790 KIF15Q9NS87 1388 aa16.77■□□□□ 0.28
ARID1B-204ENST00000400790 ATP10BO94823 1461 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms