RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 ZMYM4Q5VZL5 1548 aa25.51■■□□□ 1.67
ATG4B-203ENST00000400772 ARHGAP5Q13017 1502 aa25.5■■□□□ 1.67
ATG4B-203ENST00000400772 ARHGEF40Q8TER5 1519 aa25.48■■□□□ 1.67
ATG4B-203ENST00000400772 YEATS2Q9ULM3 1422 aa25.47■■□□□ 1.67
ATG4B-203ENST00000400772 CDC42BPBQ9Y5S2 1711 aa25.47■■□□□ 1.67
ATG4B-203ENST00000400772 MAGI2Q86UL8 1455 aa25.46■■□□□ 1.67
ATG4B-203ENST00000400772 ZFYVE16Q7Z3T8 1539 aa25.43■■□□□ 1.66
ATG4B-203ENST00000400772 ARID4BQ4LE39 1312 aaPredicted RBP25.43■■□□□ 1.66
ATG4B-203ENST00000400772 AFAP1Q8N556 730 aa25.43■■□□□ 1.66
ATG4B-203ENST00000400772 PREX2Q70Z35 1606 aa25.43■■□□□ 1.66
ATG4B-203ENST00000400772 ADAMTSL3P82987 1691 aa25.42■■□□□ 1.66
ATG4B-203ENST00000400772 CDC42BPAQ5VT25 1732 aa25.4■■□□□ 1.66
ATG4B-203ENST00000400772 ARHGEF12Q9NZN5 1544 aa25.39■■□□□ 1.66
ATG4B-203ENST00000400772 GPATCH8Q9UKJ3 1502 aaKnown RBP25.39■■□□□ 1.66
ATG4B-203ENST00000400772 BCORL1Q5H9F3 1711 aa25.39■■□□□ 1.65
ATG4B-203ENST00000400772 ZNF518AQ6AHZ1 1483 aa25.39■■□□□ 1.65
ATG4B-203ENST00000400772 SIGLEC1Q9BZZ2 1709 aa25.37■■□□□ 1.65
ATG4B-203ENST00000400772 MTUS2Q5JR59 1369 aa25.37■■□□□ 1.65
ATG4B-203ENST00000400772 KDM5CP41229 1560 aa25.35■■□□□ 1.65
ATG4B-203ENST00000400772 ABCC1P33527 1531 aa25.35■■□□□ 1.65
ATG4B-203ENST00000400772 TRAPPC8Q9Y2L5 1435 aa25.35■■□□□ 1.65
ATG4B-203ENST00000400772 ATP10AO60312 1499 aa25.34■■□□□ 1.65
ATG4B-203ENST00000400772 PTPRMP28827 1452 aa25.34■■□□□ 1.65
ATG4B-203ENST00000400772 ZNF777Q9ULD5 760 aaPredicted RBP25.32■■□□□ 1.64
ATG4B-203ENST00000400772 CCNB3Q8WWL7 1395 aa25.31■■□□□ 1.64
ATG4B-203ENST00000400772 MADDQ8WXG6 1647 aa25.3■■□□□ 1.64
ATG4B-203ENST00000400772 ITSN2Q9NZM3 1697 aa25.29■■□□□ 1.64
ATG4B-203ENST00000400772 C9orf84Q5VXU9 1444 aa25.29■■□□□ 1.64
ATG4B-203ENST00000400772 CFDP1Q9UEE9 299 aaPredicted RBP25.29■■□□□ 1.64
ATG4B-203ENST00000400772 VPS8Q8N3P4 1428 aa25.29■■□□□ 1.64
ATG4B-203ENST00000400772 MLH3Q9UHC1 1453 aa25.28■■□□□ 1.64
ATG4B-203ENST00000400772 EHBP1L1Q8N3D4 1523 aa25.28■■□□□ 1.64
ATG4B-203ENST00000400772 SAMD9LQ8IVG5 1584 aa25.28■■□□□ 1.64
ATG4B-203ENST00000400772 HECW2Q9P2P5 1572 aa25.27■■□□□ 1.64
ATG4B-203ENST00000400772 MLECQ14165 292 aa25.26■■□□□ 1.63
ATG4B-203ENST00000400772 MYT1LQ9UL68 1186 aa25.26■■□□□ 1.63
ATG4B-203ENST00000400772 HNRNPMP52272 730 aaKnown RBP eCLIP25.25■■□□□ 1.634e-7■■■■□ 21.8
ATG4B-203ENST00000400772 DIP2CQ9Y2E4 1556 aa25.23■■□□□ 1.63
ATG4B-203ENST00000400772 TIAM1Q13009 1591 aa25.22■■□□□ 1.63
ATG4B-203ENST00000400772 SYCP2Q9BX26 1530 aa25.22■■□□□ 1.63
ATG4B-203ENST00000400772 KIAA1107Q9UPP5 1409 aa25.22■■□□□ 1.63
ATG4B-203ENST00000400772 RIMS1Q86UR5 1692 aaKnown RBP25.21■■□□□ 1.63
ATG4B-203ENST00000400772 ABCA6Q8N139 1617 aa25.2■■□□□ 1.62
ATG4B-203ENST00000400772 ZNF644Q9H582 1327 aaPredicted RBP25.19■■□□□ 1.62
ATG4B-203ENST00000400772 KIDINS220Q9ULH0 1771 aa25.18■■□□□ 1.62
ATG4B-203ENST00000400772 PLEKHH2Q8IVE3 1493 aa25.18■■□□□ 1.62
ATG4B-203ENST00000400772 REREQ9P2R6 1566 aa25.18■■□□□ 1.62
ATG4B-203ENST00000400772 NCOA2Q15596 1464 aa25.17■■□□□ 1.62
ATG4B-203ENST00000400772 SPAG9O60271 1321 aaKnown RBP25.14■■□□□ 1.62
ATG4B-203ENST00000400772 KANK4Q5T7N3 995 aaPredicted RBP25.14■■□□□ 1.62
ATG4B-203ENST00000400772 LRRC9Q6ZRR7 1453 aa25.14■■□□□ 1.61
ATG4B-203ENST00000400772 SUPT6HQ7KZ85 1726 aaKnown RBP25.13■■□□□ 1.61
ATG4B-203ENST00000400772 PLPPR3Q6T4P5 718 aa25.12■■□□□ 1.61
ATG4B-203ENST00000400772 MBD5Q9P267 1494 aa25.12■■□□□ 1.61
ATG4B-203ENST00000400772 FER1L4A9Z1Z3 1794 aa25.12■■□□□ 1.61
ATG4B-203ENST00000400772 MAP3K1Q13233 1512 aa25.12■■□□□ 1.61
ATG4B-203ENST00000400772 AGLP35573 1532 aa25.11■■□□□ 1.61
ATG4B-203ENST00000400772 ATP7AQ04656 1500 aa25.07■■□□□ 1.6
ATG4B-203ENST00000400772 INO80Q9ULG1 1556 aaPredicted RBP25.05■■□□□ 1.6
ATG4B-203ENST00000400772 LMTK3Q96Q04 1460 aa25.05■■□□□ 1.6
ATG4B-203ENST00000400772 CEBPAP49715 358 aaPredicted RBP25.05■■□□□ 1.6
ATG4B-203ENST00000400772 CAMSAP2Q08AD1 1489 aa25.02■■□□□ 1.6
ATG4B-203ENST00000400772 A2MP01023 1474 aa25■■□□□ 1.59
ATG4B-203ENST00000400772 RTEL1-TNFRSF6BF6WH68 1400 aa24.99■■□□□ 1.59
ATG4B-203ENST00000400772 RSPH4AQ5TD94 716 aa24.98■■□□□ 1.59
ATG4B-203ENST00000400772 PLXNC1O60486 1568 aa24.97■■□□□ 1.59
ATG4B-203ENST00000400772 CCDC141Q6ZP82 1450 aa24.96■■□□□ 1.59
ATG4B-203ENST00000400772 HSPA2P54652 639 aa24.95■■□□□ 1.58
ATG4B-203ENST00000400772 APLP2Q06481 763 aa24.94■■□□□ 1.58
ATG4B-203ENST00000400772 ESF1Q9H501 851 aaKnown RBP24.93■■□□□ 1.58
ATG4B-203ENST00000400772 MYOM3Q5VTT5 1437 aa24.92■■□□□ 1.58
ATG4B-203ENST00000400772 ADGBQ8N7X0 1667 aa24.91■■□□□ 1.58
ATG4B-203ENST00000400772 MIA2Q96PC5 1412 aa24.91■■□□□ 1.58
ATG4B-203ENST00000400772 ARHGEF5Q12774 1597 aa24.91■■□□□ 1.58
ATG4B-203ENST00000400772 DHX29Q7Z478 1369 aaKnown RBP24.91■■□□□ 1.58
ATG4B-203ENST00000400772 CNTLNQ9NXG0 1405 aa24.9■■□□□ 1.58
ATG4B-203ENST00000400772 C3P01024 1663 aa24.9■■□□□ 1.58
ATG4B-203ENST00000400772 GGT6Q6P531 493 aa24.88■■□□□ 1.57
ATG4B-203ENST00000400772 TSPY4P0CV99 314 aa24.87■■□□□ 1.57
ATG4B-203ENST00000400772 TSPY10P0CW01 314 aa24.87■■□□□ 1.57
ATG4B-203ENST00000400772 ZMYM3Q14202 1370 aa24.86■■□□□ 1.57
ATG4B-203ENST00000400772 SETD1BQ9UPS6 1966 aaKnown RBP24.85■■□□□ 1.57
ATG4B-203ENST00000400772 PREX1Q8TCU6 1659 aa24.85■■□□□ 1.57
ATG4B-203ENST00000400772 PPP6R1Q9UPN7 881 aa24.83■■□□□ 1.57
ATG4B-203ENST00000400772 UHRF1BP1Q6BDS2 1440 aa24.8■■□□□ 1.56
ATG4B-203ENST00000400772 KIF3BO15066 747 aa24.8■■□□□ 1.56
ATG4B-203ENST00000400772 MROH2AA6NES4 1674 aa24.8■■□□□ 1.56
ATG4B-203ENST00000400772 CLTCQ00610 1675 aaKnown RBP24.79■■□□□ 1.56
ATG4B-203ENST00000400772 MAST1Q9Y2H9 1570 aa24.79■■□□□ 1.56
ATG4B-203ENST00000400772 NPATQ14207 1427 aa24.76■■□□□ 1.55
ATG4B-203ENST00000400772 FGD6Q6ZV73 1430 aa24.75■■□□□ 1.55
ATG4B-203ENST00000400772 PTPN23Q9H3S7 1636 aa24.75■■□□□ 1.55
ATG4B-203ENST00000400772 ABCC5O15440 1437 aa24.74■■□□□ 1.55
ATG4B-203ENST00000400772 ILDR1Q86SU0 546 aaPredicted RBP24.73■■□□□ 1.55
ATG4B-203ENST00000400772 TCOF1Q13428 1488 aaKnown RBP24.72■■□□□ 1.55
ATG4B-203ENST00000400772 PTPRKQ15262 1439 aa24.72■■□□□ 1.55
ATG4B-203ENST00000400772 STRCQ7RTU9 1775 aa24.67■■□□□ 1.54
ATG4B-203ENST00000400772 WASHC2CQ9Y4E1 1318 aa24.67■■□□□ 1.54
ATG4B-203ENST00000400772 DAPK1P53355 1430 aa24.67■■□□□ 1.54
ATG4B-203ENST00000400772 SHANK2Q9UPX8 1470 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms