RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 PLCH2O75038 1416 aa19.87■□□□□ 0.77
LINC00544-201ENST00000400540 FMN1Q68DA7 1419 aa19.86■□□□□ 0.77
LINC00544-201ENST00000400540 MAGI2Q86UL8 1455 aa19.86■□□□□ 0.77
LINC00544-201ENST00000400540 SCAPERQ9BY12 1400 aa19.85■□□□□ 0.77
LINC00544-201ENST00000400540 UBTFP17480 764 aaKnown RBP19.85■□□□□ 0.77
LINC00544-201ENST00000400540 ATP1B4Q9UN42 357 aaPredicted RBP19.84■□□□□ 0.77
LINC00544-201ENST00000400540 CDC42BPBQ9Y5S2 1711 aa19.83■□□□□ 0.77
LINC00544-201ENST00000400540 PLPPR3Q6T4P5 718 aa19.83■□□□□ 0.77
LINC00544-201ENST00000400540 MLECQ14165 292 aa19.79■□□□□ 0.76
LINC00544-201ENST00000400540 ARHGAP5Q13017 1502 aa19.79■□□□□ 0.76
LINC00544-201ENST00000400540 ARHGEF12Q9NZN5 1544 aa19.78■□□□□ 0.76
LINC00544-201ENST00000400540 FBXO41Q8TF61 875 aa19.78■□□□□ 0.76
LINC00544-201ENST00000400540 KDM5CP41229 1560 aa19.78■□□□□ 0.76
LINC00544-201ENST00000400540 TROQ12816 1431 aaPredicted RBP19.77■□□□□ 0.76
LINC00544-201ENST00000400540 HSPA2P54652 639 aa19.77■□□□□ 0.76
LINC00544-201ENST00000400540 CHIC1Q5VXU3 224 aa19.77■□□□□ 0.76
LINC00544-201ENST00000400540 ATP10AO60312 1499 aa19.77■□□□□ 0.76
LINC00544-201ENST00000400540 PREX1Q8TCU6 1659 aa19.77■□□□□ 0.76
LINC00544-201ENST00000400540 C9orf84Q5VXU9 1444 aa19.76■□□□□ 0.75
LINC00544-201ENST00000400540 PREX2Q70Z35 1606 aa19.76■□□□□ 0.75
LINC00544-201ENST00000400540 ABCA6Q8N139 1617 aa19.75■□□□□ 0.75
LINC00544-201ENST00000400540 ITSN2Q9NZM3 1697 aa19.75■□□□□ 0.75
LINC00544-201ENST00000400540 DIP2CQ9Y2E4 1556 aa19.74■□□□□ 0.75
LINC00544-201ENST00000400540 ZNF518AQ6AHZ1 1483 aa19.74■□□□□ 0.75
LINC00544-201ENST00000400540 CDC42BPAQ5VT25 1732 aa19.73■□□□□ 0.75
LINC00544-201ENST00000400540 EFCAB2Q5VUJ9 269 aa19.73■□□□□ 0.75
LINC00544-201ENST00000400540 CLIP1P30622 1438 aa19.72■□□□□ 0.75
LINC00544-201ENST00000400540 CDK11AQ9UQ88 783 aaPredicted RBP19.72■□□□□ 0.75
LINC00544-201ENST00000400540 ABCC1P33527 1531 aa19.7■□□□□ 0.74
LINC00544-201ENST00000400540 AFAP1Q8N556 730 aa19.68■□□□□ 0.74
LINC00544-201ENST00000400540 REREQ9P2R6 1566 aa19.68■□□□□ 0.74
LINC00544-201ENST00000400540 C3P01024 1663 aa19.68■□□□□ 0.74
LINC00544-201ENST00000400540 STRCQ7RTU9 1775 aa19.67■□□□□ 0.74
LINC00544-201ENST00000400540 CCDC18Q5T9S5 1454 aa19.67■□□□□ 0.74
LINC00544-201ENST00000400540 KIDINS220Q9ULH0 1771 aa19.66■□□□□ 0.74
LINC00544-201ENST00000400540 CASKIN1Q8WXD9 1431 aa19.66■□□□□ 0.74
LINC00544-201ENST00000400540 CEBPAP49715 358 aaPredicted RBP19.64■□□□□ 0.73
LINC00544-201ENST00000400540 TRAPPC8Q9Y2L5 1435 aa19.63■□□□□ 0.73
LINC00544-201ENST00000400540 MLH3Q9UHC1 1453 aa19.62■□□□□ 0.73
LINC00544-201ENST00000400540 MYT1LQ9UL68 1186 aa19.61■□□□□ 0.73
LINC00544-201ENST00000400540 FYCO1Q9BQS8 1478 aa19.6■□□□□ 0.73
LINC00544-201ENST00000400540 SAMD9LQ8IVG5 1584 aa19.6■□□□□ 0.73
LINC00544-201ENST00000400540 SETD1BQ9UPS6 1966 aaKnown RBP19.59■□□□□ 0.73
LINC00544-201ENST00000400540 AGLP35573 1532 aa19.58■□□□□ 0.73
LINC00544-201ENST00000400540 SYCP2Q9BX26 1530 aa19.56■□□□□ 0.72
LINC00544-201ENST00000400540 SUPT6HQ7KZ85 1726 aaKnown RBP19.56■□□□□ 0.72
LINC00544-201ENST00000400540 UHRF1BP1Q6BDS2 1440 aa19.55■□□□□ 0.72
LINC00544-201ENST00000400540 CERKQ8TCT0 537 aa19.53■□□□□ 0.72
LINC00544-201ENST00000400540 MROH2AA6NES4 1674 aa19.52■□□□□ 0.71
LINC00544-201ENST00000400540 GPATCH8Q9UKJ3 1502 aaKnown RBP19.51■□□□□ 0.71
LINC00544-201ENST00000400540 INO80Q9ULG1 1556 aaPredicted RBP19.5■□□□□ 0.71
LINC00544-201ENST00000400540 CLTCQ00610 1675 aaKnown RBP19.49■□□□□ 0.71
LINC00544-201ENST00000400540 ZNF777Q9ULD5 760 aaPredicted RBP19.48■□□□□ 0.71
LINC00544-201ENST00000400540 ATP7AQ04656 1500 aa19.47■□□□□ 0.71
LINC00544-201ENST00000400540 PLXNC1O60486 1568 aa19.46■□□□□ 0.71
LINC00544-201ENST00000400540 CNTLNQ9NXG0 1405 aa19.43■□□□□ 0.7
LINC00544-201ENST00000400540 ESF1Q9H501 851 aaKnown RBP19.43■□□□□ 0.7
LINC00544-201ENST00000400540 TIAM1Q13009 1591 aa19.43■□□□□ 0.7
LINC00544-201ENST00000400540 ADGBQ8N7X0 1667 aa19.43■□□□□ 0.7
LINC00544-201ENST00000400540 HNRNPMP52272 730 aaKnown RBP eCLIP19.42■□□□□ 0.7
LINC00544-201ENST00000400540 MYO3AQ8NEV4 1616 aa19.42■□□□□ 0.7
LINC00544-201ENST00000400540 SPAG9O60271 1321 aaKnown RBP19.41■□□□□ 0.7
LINC00544-201ENST00000400540 CAMSAP1Q5T5Y3 1602 aa19.4■□□□□ 0.7
LINC00544-201ENST00000400540 ZNF142P52746 1687 aaPredicted RBP19.4■□□□□ 0.7
LINC00544-201ENST00000400540 DMRT2Q9Y5R5 561 aa19.4■□□□□ 0.7
LINC00544-201ENST00000400540 PTPRTO14522 1441 aa19.4■□□□□ 0.7
LINC00544-201ENST00000400540 NCOA1Q15788 1441 aa19.39■□□□□ 0.69
LINC00544-201ENST00000400540 PLEKHH2Q8IVE3 1493 aa19.39■□□□□ 0.69
LINC00544-201ENST00000400540 A2MP01023 1474 aa19.38■□□□□ 0.69
LINC00544-201ENST00000400540 LTBP4Q8N2S1 1624 aa19.38■□□□□ 0.69
LINC00544-201ENST00000400540 CCNB3Q8WWL7 1395 aa19.38■□□□□ 0.69
LINC00544-201ENST00000400540 KIAA1107Q9UPP5 1409 aa19.38■□□□□ 0.69
LINC00544-201ENST00000400540 EHBP1L1Q8N3D4 1523 aa19.37■□□□□ 0.69
LINC00544-201ENST00000400540 NPATQ14207 1427 aa19.36■□□□□ 0.69
LINC00544-201ENST00000400540 MTUS2Q5JR59 1369 aa19.36■□□□□ 0.69
LINC00544-201ENST00000400540 CFDP1Q9UEE9 299 aaPredicted RBP19.36■□□□□ 0.69
LINC00544-201ENST00000400540 ZMYM3Q14202 1370 aa19.34■□□□□ 0.69
LINC00544-201ENST00000400540 CEP170BQ9Y4F5 1589 aaPredicted RBP19.32■□□□□ 0.68
LINC00544-201ENST00000400540 ZNF644Q9H582 1327 aaPredicted RBP19.32■□□□□ 0.68
LINC00544-201ENST00000400540 MBD5Q9P267 1494 aa19.31■□□□□ 0.68
LINC00544-201ENST00000400540 PTPRKQ15262 1439 aa19.29■□□□□ 0.68
LINC00544-201ENST00000400540 CEP162Q5TB80 1403 aa19.27■□□□□ 0.68
LINC00544-201ENST00000400540 GGT6Q6P531 493 aa19.27■□□□□ 0.68
LINC00544-201ENST00000400540 NCKAP5LQ9HCH0 1330 aa19.25■□□□□ 0.67
LINC00544-201ENST00000400540 POLR1AO95602 1720 aaPredicted RBP19.25■□□□□ 0.67
LINC00544-201ENST00000400540 IQSEC2Q5JU85 1478 aa19.25■□□□□ 0.67
LINC00544-201ENST00000400540 SPATA31D1Q6ZQQ2 1576 aa19.24■□□□□ 0.67
LINC00544-201ENST00000400540 CAMSAP2Q08AD1 1489 aa19.24■□□□□ 0.67
LINC00544-201ENST00000400540 PLA2R1Q13018 1463 aa19.24■□□□□ 0.67
LINC00544-201ENST00000400540 DNMT1P26358 1616 aaKnown RBP19.24■□□□□ 0.67
LINC00544-201ENST00000400540 TCOF1Q13428 1488 aaKnown RBP19.23■□□□□ 0.67
LINC00544-201ENST00000400540 NCOA2Q15596 1464 aa19.22■□□□□ 0.67
LINC00544-201ENST00000400540 RTEL1-TNFRSF6BF6WH68 1400 aa19.22■□□□□ 0.67
LINC00544-201ENST00000400540 CCDC141Q6ZP82 1450 aa19.22■□□□□ 0.67
LINC00544-201ENST00000400540 DISP3Q9P2K9 1392 aa19.21■□□□□ 0.67
LINC00544-201ENST00000400540 ZNF335Q9H4Z2 1342 aaPredicted RBP19.21■□□□□ 0.67
LINC00544-201ENST00000400540 KDM5DQ9BY66 1539 aa19.19■□□□□ 0.66
LINC00544-201ENST00000400540 DHX29Q7Z478 1369 aaKnown RBP19.19■□□□□ 0.66
LINC00544-201ENST00000400540 A2ML1A8K2U0 1454 aa19.18■□□□□ 0.66
LINC00544-201ENST00000400540 ILDR2Q71H61 639 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms