RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 CROCC2H7BZ55 1655 aa11.91□□□□□ -0.5
USP16-204ENST00000399976 MAST1Q9Y2H9 1570 aa11.91□□□□□ -0.5
USP16-204ENST00000399976 MTUS2Q5JR59 1369 aa11.91□□□□□ -0.5
USP16-204ENST00000399976 SAMD9LQ8IVG5 1584 aa11.9□□□□□ -0.5
USP16-204ENST00000399976 FANCAO15360 1455 aa11.9□□□□□ -0.5
USP16-204ENST00000399976 FAM69CQ0P6D2 419 aa11.9□□□□□ -0.5
USP16-204ENST00000399976 TCOF1Q13428 1488 aaKnown RBP11.9□□□□□ -0.5
USP16-204ENST00000399976 BCORL1Q5H9F3 1711 aa11.89□□□□□ -0.51
USP16-204ENST00000399976 ARHGAP5Q13017 1502 aa11.88□□□□□ -0.51
USP16-204ENST00000399976 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.87□□□□□ -0.51
USP16-204ENST00000399976 INO80Q9ULG1 1556 aaPredicted RBP11.87□□□□□ -0.51
USP16-204ENST00000399976 AKNAQ7Z591 1439 aa11.87□□□□□ -0.51
USP16-204ENST00000399976 ARHGEF40Q8TER5 1519 aa11.87□□□□□ -0.51
USP16-204ENST00000399976 MYOM3Q5VTT5 1437 aa11.86□□□□□ -0.51
USP16-204ENST00000399976 RANGAP1P46060 587 aaPredicted RBP11.86□□□□□ -0.51
USP16-204ENST00000399976 HECW2Q9P2P5 1572 aa11.86□□□□□ -0.51
USP16-204ENST00000399976 POGZQ7Z3K3 1410 aa11.86□□□□□ -0.51
USP16-204ENST00000399976 ZNF518AQ6AHZ1 1483 aa11.85□□□□□ -0.51
USP16-204ENST00000399976 SHANK2Q9UPX8 1470 aa11.85□□□□□ -0.51
USP16-204ENST00000399976 ADGBQ8N7X0 1667 aa11.85□□□□□ -0.51
USP16-204ENST00000399976 TTBK1Q5TCY1 1321 aaPredicted RBP11.84□□□□□ -0.51
USP16-204ENST00000399976 PLXNC1O60486 1568 aa11.84□□□□□ -0.51
USP16-204ENST00000399976 DENND4BO75064 1496 aaPredicted RBP11.84□□□□□ -0.51
USP16-204ENST00000399976 MLH3Q9UHC1 1453 aa11.84□□□□□ -0.51
USP16-204ENST00000399976 PTPN23Q9H3S7 1636 aa11.84□□□□□ -0.51
USP16-204ENST00000399976 CCNB3Q8WWL7 1395 aa11.84□□□□□ -0.51
USP16-204ENST00000399976 EHMT2Q96KQ7 1210 aa11.84□□□□□ -0.51
USP16-204ENST00000399976 DNMT1P26358 1616 aaKnown RBP11.84□□□□□ -0.51
USP16-204ENST00000399976 ADGRL1O94910 1474 aa11.84□□□□□ -0.51
USP16-204ENST00000399976 FAM135AQ9P2D6 1515 aa11.84□□□□□ -0.51
USP16-204ENST00000399976 RTEL1-TNFRSF6BF6WH68 1400 aa11.82□□□□□ -0.52
USP16-204ENST00000399976 EFCAB2Q5VUJ9 269 aa11.82□□□□□ -0.52
USP16-204ENST00000399976 CAMSAP2Q08AD1 1489 aa11.81□□□□□ -0.52
USP16-204ENST00000399976 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.81□□□□□ -0.52
USP16-204ENST00000399976 TRHP20396 242 aaPredicted RBP11.81□□□□□ -0.52
USP16-204ENST00000399976 HNRNPUL2Q1KMD3 747 aaKnown RBP11.81□□□□□ -0.52
USP16-204ENST00000399976 RSPH4AQ5TD94 716 aa11.81□□□□□ -0.52
USP16-204ENST00000399976 KIDINS220Q9ULH0 1771 aa11.81□□□□□ -0.52
USP16-204ENST00000399976 MBD5Q9P267 1494 aa11.8□□□□□ -0.52
USP16-204ENST00000399976 EIF2AK4Q9P2K8 1649 aaKnown RBP11.8□□□□□ -0.52
USP16-204ENST00000399976 APLP2Q06481 763 aa11.8□□□□□ -0.52
USP16-204ENST00000399976 AGLP35573 1532 aa11.79□□□□□ -0.52
USP16-204ENST00000399976 SYCP2Q9BX26 1530 aa11.79□□□□□ -0.52
USP16-204ENST00000399976 ZFYVE16Q7Z3T8 1539 aa11.79□□□□□ -0.52
USP16-204ENST00000399976 FGD6Q6ZV73 1430 aa11.79□□□□□ -0.52
USP16-204ENST00000399976 CCDC141Q6ZP82 1450 aa11.78□□□□□ -0.52
USP16-204ENST00000399976 COL17A1Q9UMD9 1497 aaPredicted RBP11.78□□□□□ -0.52
USP16-204ENST00000399976 RRBP1Q9P2E9 1410 aaKnown RBP11.78□□□□□ -0.52
USP16-204ENST00000399976 ARHGEF12Q9NZN5 1544 aa11.77□□□□□ -0.52
USP16-204ENST00000399976 DIP2CQ9Y2E4 1556 aa11.77□□□□□ -0.53
USP16-204ENST00000399976 KCNH8Q96L42 1107 aa11.77□□□□□ -0.53
USP16-204ENST00000399976 ATP7AQ04656 1500 aa11.76□□□□□ -0.53
USP16-204ENST00000399976 ABCA6Q8N139 1617 aa11.76□□□□□ -0.53
USP16-204ENST00000399976 ADGRL2O95490 1459 aa11.76□□□□□ -0.53
USP16-204ENST00000399976 SCAPERQ9BY12 1400 aa11.75□□□□□ -0.53
USP16-204ENST00000399976 ATP1B4Q9UN42 357 aaPredicted RBP11.75□□□□□ -0.53
USP16-204ENST00000399976 KANK4Q5T7N3 995 aaPredicted RBP11.73□□□□□ -0.53
USP16-204ENST00000399976 RNF17Q9BXT8 1623 aaKnown RBP11.73□□□□□ -0.53
USP16-204ENST00000399976 MROH2AA6NES4 1674 aa11.73□□□□□ -0.53
USP16-204ENST00000399976 ZC3H13Q5T200 1668 aaKnown RBP11.72□□□□□ -0.53
USP16-204ENST00000399976 C9orf84Q5VXU9 1444 aa11.72□□□□□ -0.53
USP16-204ENST00000399976 CFDP1Q9UEE9 299 aaPredicted RBP11.71□□□□□ -0.53
USP16-204ENST00000399976 DEPDC5O75140 1603 aa11.71□□□□□ -0.53
USP16-204ENST00000399976 ATP10AO60312 1499 aa11.71□□□□□ -0.53
USP16-204ENST00000399976 ARID3CA6NKF2 412 aa11.71□□□□□ -0.54
USP16-204ENST00000399976 ADAMTSL3P82987 1691 aa11.71□□□□□ -0.54
USP16-204ENST00000399976 GCC2Q8IWJ2 1684 aa11.71□□□□□ -0.54
USP16-204ENST00000399976 TRAPPC8Q9Y2L5 1435 aa11.7□□□□□ -0.54
USP16-204ENST00000399976 DAPK1P53355 1430 aa11.69□□□□□ -0.54
USP16-204ENST00000399976 ROCK1Q13464 1354 aa11.69□□□□□ -0.54
USP16-204ENST00000399976 DUOX2Q9NRD8 1548 aa11.69□□□□□ -0.54
USP16-204ENST00000399976 SIGLEC1Q9BZZ2 1709 aa11.67□□□□□ -0.54
USP16-204ENST00000399976 KDM5DQ9BY66 1539 aa11.67□□□□□ -0.54
USP16-204ENST00000399976 ERBINQ96RT1 1412 aa11.66□□□□□ -0.54
USP16-204ENST00000399976 ABCC5O15440 1437 aa11.66□□□□□ -0.54
USP16-204ENST00000399976 ACIN1Q9UKV3 1341 aaKnown RBP11.65□□□□□ -0.54
USP16-204ENST00000399976 UNC13BO14795 1591 aa11.65□□□□□ -0.54
USP16-204ENST00000399976 FER1L4A9Z1Z3 1794 aa11.64□□□□□ -0.55
USP16-204ENST00000399976 PRDM15P57071 1507 aaPredicted RBP11.64□□□□□ -0.55
USP16-204ENST00000399976 A2MP01023 1474 aa11.64□□□□□ -0.55
USP16-204ENST00000399976 VWDEQ8N2E2 1590 aa11.63□□□□□ -0.55
USP16-204ENST00000399976 PPP6R1Q9UPN7 881 aa11.62□□□□□ -0.55
USP16-204ENST00000399976 YEATS2Q9ULM3 1422 aa11.62□□□□□ -0.55
USP16-204ENST00000399976 MROH1Q8NDA8 1641 aa11.61□□□□□ -0.55
USP16-204ENST00000399976 LMTK2Q8IWU2 1503 aa11.61□□□□□ -0.55
USP16-204ENST00000399976 DHX29Q7Z478 1369 aaKnown RBP11.61□□□□□ -0.55
USP16-204ENST00000399976 SPAG9O60271 1321 aaKnown RBP11.6□□□□□ -0.55
USP16-204ENST00000399976 CNTLNQ9NXG0 1405 aa11.6□□□□□ -0.55
USP16-204ENST00000399976 NCOA1Q15788 1441 aa11.59□□□□□ -0.55
USP16-204ENST00000399976 ANKRD30AQ9BXX3 1397 aa11.59□□□□□ -0.55
USP16-204ENST00000399976 IQGAP3Q86VI3 1631 aa11.58□□□□□ -0.56
USP16-204ENST00000399976 RAPGEF3O95398 923 aa11.57□□□□□ -0.56
USP16-204ENST00000399976 KDM5AP29375 1690 aaKnown RBP11.56□□□□□ -0.56
USP16-204ENST00000399976 ZNF644Q9H582 1327 aaPredicted RBP11.56□□□□□ -0.56
USP16-204ENST00000399976 MADDQ8WXG6 1647 aa11.56□□□□□ -0.56
USP16-204ENST00000399976 TSPY4P0CV99 314 aa11.55□□□□□ -0.56
USP16-204ENST00000399976 TSPY10P0CW01 314 aa11.55□□□□□ -0.56
USP16-204ENST00000399976 TET3O43151 1660 aa11.55□□□□□ -0.56
USP16-204ENST00000399976 HNRNPMP52272 730 aaKnown RBP eCLIP11.55□□□□□ -0.56
USP16-204ENST00000399976 HFM1A2PYH4 1435 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms