RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 KIF13AQ9H1H9 1805 aa10.53□□□□□ -0.72
USP16-203ENST00000399975 TRIM26Q12899 539 aaPredicted RBP10.53□□□□□ -0.72
USP16-203ENST00000399975 PPARGC1BQ86YN6 1023 aaKnown RBP10.51□□□□□ -0.73
USP16-203ENST00000399975 ARHGEF5Q12774 1597 aa10.51□□□□□ -0.73
USP16-203ENST00000399975 PLEKHH2Q8IVE3 1493 aa10.5□□□□□ -0.73
USP16-203ENST00000399975 SAMD9LQ8IVG5 1584 aa10.5□□□□□ -0.73
USP16-203ENST00000399975 CROCC2H7BZ55 1655 aa10.49□□□□□ -0.73
USP16-203ENST00000399975 DNMT1P26358 1616 aaKnown RBP10.49□□□□□ -0.73
USP16-203ENST00000399975 PPRC1Q5VV67 1664 aaKnown RBP10.49□□□□□ -0.73
USP16-203ENST00000399975 CAMSAP2Q08AD1 1489 aa10.49□□□□□ -0.73
USP16-203ENST00000399975 KIAA1107Q9UPP5 1409 aa10.49□□□□□ -0.73
USP16-203ENST00000399975 ARHGAP5Q13017 1502 aa10.48□□□□□ -0.73
USP16-203ENST00000399975 ABCC1P33527 1531 aa10.47□□□□□ -0.73
USP16-203ENST00000399975 NEO1Q92859 1461 aa10.47□□□□□ -0.73
USP16-203ENST00000399975 CD109Q6YHK3 1445 aa10.47□□□□□ -0.73
USP16-203ENST00000399975 MAST1Q9Y2H9 1570 aa10.46□□□□□ -0.73
USP16-203ENST00000399975 SHANK2Q9UPX8 1470 aa10.46□□□□□ -0.74
USP16-203ENST00000399975 KCNH8Q96L42 1107 aa10.46□□□□□ -0.74
USP16-203ENST00000399975 CFDP1Q9UEE9 299 aaPredicted RBP10.45□□□□□ -0.74
USP16-203ENST00000399975 MBD5Q9P267 1494 aa10.45□□□□□ -0.74
USP16-203ENST00000399975 ADGBQ8N7X0 1667 aa10.45□□□□□ -0.74
USP16-203ENST00000399975 FANCAO15360 1455 aa10.44□□□□□ -0.74
USP16-203ENST00000399975 EFCAB2Q5VUJ9 269 aa10.44□□□□□ -0.74
USP16-203ENST00000399975 TEX14Q8IWB6 1497 aa10.44□□□□□ -0.74
USP16-203ENST00000399975 RSPH4AQ5TD94 716 aa10.44□□□□□ -0.74
USP16-203ENST00000399975 AKNAQ7Z591 1439 aa10.43□□□□□ -0.74
USP16-203ENST00000399975 DAPK1P53355 1430 aa10.43□□□□□ -0.74
USP16-203ENST00000399975 ADGRL2O95490 1459 aa10.42□□□□□ -0.74
USP16-203ENST00000399975 ABCC5O15440 1437 aa10.42□□□□□ -0.74
USP16-203ENST00000399975 SYCP2Q9BX26 1530 aa10.42□□□□□ -0.74
USP16-203ENST00000399975 CCDC141Q6ZP82 1450 aa10.41□□□□□ -0.74
USP16-203ENST00000399975 ARHGEF12Q9NZN5 1544 aa10.41□□□□□ -0.74
USP16-203ENST00000399975 ROCK1Q13464 1354 aa10.41□□□□□ -0.74
USP16-203ENST00000399975 GCC2Q8IWJ2 1684 aa10.41□□□□□ -0.74
USP16-203ENST00000399975 FAM69CQ0P6D2 419 aa10.4□□□□□ -0.74
USP16-203ENST00000399975 KDM5CP41229 1560 aa10.4□□□□□ -0.74
USP16-203ENST00000399975 PLXNC1O60486 1568 aa10.4□□□□□ -0.74
USP16-203ENST00000399975 RICTORQ6R327 1708 aa10.4□□□□□ -0.75
USP16-203ENST00000399975 PTPRKQ15262 1439 aa10.39□□□□□ -0.75
USP16-203ENST00000399975 ADGRL1O94910 1474 aa10.39□□□□□ -0.75
USP16-203ENST00000399975 ZNF644Q9H582 1327 aaPredicted RBP10.39□□□□□ -0.75
USP16-203ENST00000399975 RTEL1-TNFRSF6BF6WH68 1400 aa10.39□□□□□ -0.75
USP16-203ENST00000399975 INO80Q9ULG1 1556 aaPredicted RBP10.39□□□□□ -0.75
USP16-203ENST00000399975 FAM50AQ14320 339 aaKnown RBP10.38□□□□□ -0.75
USP16-203ENST00000399975 TSPOAP1O95153 1857 aa10.38□□□□□ -0.75
USP16-203ENST00000399975 ZMYM4Q5VZL5 1548 aa10.38□□□□□ -0.75
USP16-203ENST00000399975 POGZQ7Z3K3 1410 aa10.37□□□□□ -0.75
USP16-203ENST00000399975 ZNF518AQ6AHZ1 1483 aa10.37□□□□□ -0.75
USP16-203ENST00000399975 FRMPD1Q5SYB0 1578 aa10.37□□□□□ -0.75
USP16-203ENST00000399975 HFM1A2PYH4 1435 aa10.36□□□□□ -0.75
USP16-203ENST00000399975 SCAPERQ9BY12 1400 aa10.36□□□□□ -0.75
USP16-203ENST00000399975 TRAPPC8Q9Y2L5 1435 aa10.36□□□□□ -0.75
USP16-203ENST00000399975 ZFYVE16Q7Z3T8 1539 aa10.36□□□□□ -0.75
USP16-203ENST00000399975 HRCP23327 699 aa10.35□□□□□ -0.75
USP16-203ENST00000399975 C9orf84Q5VXU9 1444 aa10.35□□□□□ -0.75
USP16-203ENST00000399975 DENND4BO75064 1496 aaPredicted RBP10.35□□□□□ -0.75
USP16-203ENST00000399975 MLH3Q9UHC1 1453 aa10.35□□□□□ -0.75
USP16-203ENST00000399975 ACIN1Q9UKV3 1341 aaKnown RBP10.34□□□□□ -0.75
USP16-203ENST00000399975 HECW2Q9P2P5 1572 aa10.34□□□□□ -0.75
USP16-203ENST00000399975 NCOA1Q15788 1441 aa10.34□□□□□ -0.75
USP16-203ENST00000399975 ZNF777Q9ULD5 760 aaPredicted RBP10.34□□□□□ -0.75
USP16-203ENST00000399975 KIDINS220Q9ULH0 1771 aa10.34□□□□□ -0.75
USP16-203ENST00000399975 PCGF6Q9BYE7 350 aa10.34□□□□□ -0.75
USP16-203ENST00000399975 ATP7AQ04656 1500 aa10.33□□□□□ -0.76
USP16-203ENST00000399975 HNRNPMP52272 730 aaKnown RBP eCLIP10.33□□□□□ -0.76
USP16-203ENST00000399975 NAIPQ13075 1403 aa10.33□□□□□ -0.76
USP16-203ENST00000399975 BCORL1Q5H9F3 1711 aa10.33□□□□□ -0.76
USP16-203ENST00000399975 MAGI2Q86UL8 1455 aa10.33□□□□□ -0.76
USP16-203ENST00000399975 ANKRD30AQ9BXX3 1397 aa10.32□□□□□ -0.76
USP16-203ENST00000399975 SETD5Q9C0A6 1442 aa10.32□□□□□ -0.76
USP16-203ENST00000399975 EIF2AK4Q9P2K8 1649 aaKnown RBP10.32□□□□□ -0.76
USP16-203ENST00000399975 DUOX2Q9NRD8 1548 aa10.32□□□□□ -0.76
USP16-203ENST00000399975 REREQ9P2R6 1566 aa10.31□□□□□ -0.76
USP16-203ENST00000399975 TSPY4P0CV99 314 aa10.31□□□□□ -0.76
USP16-203ENST00000399975 TSPY10P0CW01 314 aa10.31□□□□□ -0.76
USP16-203ENST00000399975 ERBINQ96RT1 1412 aa10.29□□□□□ -0.76
USP16-203ENST00000399975 ABCA6Q8N139 1617 aa10.29□□□□□ -0.76
USP16-203ENST00000399975 DIP2CQ9Y2E4 1556 aa10.28□□□□□ -0.76
USP16-203ENST00000399975 SPAG9O60271 1321 aaKnown RBP10.28□□□□□ -0.76
USP16-203ENST00000399975 UNC13BO14795 1591 aa10.28□□□□□ -0.76
USP16-203ENST00000399975 KDM5DQ9BY66 1539 aa10.28□□□□□ -0.76
USP16-203ENST00000399975 DEPDC5O75140 1603 aa10.28□□□□□ -0.76
USP16-203ENST00000399975 COL17A1Q9UMD9 1497 aaPredicted RBP10.27□□□□□ -0.76
USP16-203ENST00000399975 KDM6BO15054 1643 aa10.27□□□□□ -0.77
USP16-203ENST00000399975 ARHGEF40Q8TER5 1519 aa10.27□□□□□ -0.77
USP16-203ENST00000399975 KIF15Q9NS87 1388 aa10.26□□□□□ -0.77
USP16-203ENST00000399975 AFAP1Q8N556 730 aa10.26□□□□□ -0.77
USP16-203ENST00000399975 RAB3GAP2Q9H2M9 1393 aa10.26□□□□□ -0.77
USP16-203ENST00000399975 RNF17Q9BXT8 1623 aaKnown RBP10.26□□□□□ -0.77
USP16-203ENST00000399975 ITGAEP38570 1179 aa10.26□□□□□ -0.77
USP16-203ENST00000399975 ANKRD50Q9ULJ7 1429 aa10.25□□□□□ -0.77
USP16-203ENST00000399975 DHX29Q7Z478 1369 aaKnown RBP10.25□□□□□ -0.77
USP16-203ENST00000399975 AGLP35573 1532 aa10.24□□□□□ -0.77
USP16-203ENST00000399975 A2MP01023 1474 aa10.24□□□□□ -0.77
USP16-203ENST00000399975 CHIC2Q9UKJ5 165 aa10.24□□□□□ -0.77
USP16-203ENST00000399975 TRHP20396 242 aaPredicted RBP10.23□□□□□ -0.77
USP16-203ENST00000399975 ATP10AO60312 1499 aa10.23□□□□□ -0.77
USP16-203ENST00000399975 VWDEQ8N2E2 1590 aa10.23□□□□□ -0.77
USP16-203ENST00000399975 FAM135AQ9P2D6 1515 aa10.23□□□□□ -0.77
USP16-203ENST00000399975 IQGAP3Q86VI3 1631 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms