RNA–Protein interactions for RNA: ENST00000399627.3

SBF1-203, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 811 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-203ENST00000399627 PHLDB1Q86UU1 1377 aa28.5■■■□□ 2.15
SBF1-203ENST00000399627 ARHGAP5Q13017 1502 aa28.48■■■□□ 2.15
SBF1-203ENST00000399627 AKNAQ7Z591 1439 aa28.48■■■□□ 2.15
SBF1-203ENST00000399627 EFCAB2Q5VUJ9 269 aa28.47■■■□□ 2.15
SBF1-203ENST00000399627 GPATCH8Q9UKJ3 1502 aaKnown RBP28.46■■■□□ 2.15
SBF1-203ENST00000399627 CCNB3Q8WWL7 1395 aa28.46■■■□□ 2.15
SBF1-203ENST00000399627 NCOA2Q15596 1464 aa28.46■■■□□ 2.15
SBF1-203ENST00000399627 ITSN2Q9NZM3 1697 aa28.39■■■□□ 2.14
SBF1-203ENST00000399627 ADGRL1O94910 1474 aa28.39■■■□□ 2.13
SBF1-203ENST00000399627 RAPGEF3O95398 923 aa28.37■■■□□ 2.13
SBF1-203ENST00000399627 DENND4BO75064 1496 aaPredicted RBP28.36■■■□□ 2.13
SBF1-203ENST00000399627 CFDP1Q9UEE9 299 aaPredicted RBP28.36■■■□□ 2.13
SBF1-203ENST00000399627 SCAPERQ9BY12 1400 aa28.35■■■□□ 2.13
SBF1-203ENST00000399627 FRMPD1Q5SYB0 1578 aa28.34■■■□□ 2.13
SBF1-203ENST00000399627 ZNF777Q9ULD5 760 aaPredicted RBP28.34■■■□□ 2.13
SBF1-203ENST00000399627 RICTORQ6R327 1708 aa28.34■■■□□ 2.13
SBF1-203ENST00000399627 SAMD9LQ8IVG5 1584 aa28.33■■■□□ 2.12
SBF1-203ENST00000399627 ABCC1P33527 1531 aa28.3■■■□□ 2.12
SBF1-203ENST00000399627 POGZQ7Z3K3 1410 aa28.28■■■□□ 2.12
SBF1-203ENST00000399627 ARHGEF12Q9NZN5 1544 aa28.28■■■□□ 2.12
SBF1-203ENST00000399627 MYOM3Q5VTT5 1437 aa28.25■■■□□ 2.11
SBF1-203ENST00000399627 ZNF644Q9H582 1327 aaPredicted RBP28.24■■■□□ 2.11
SBF1-203ENST00000399627 SYCP2Q9BX26 1530 aa28.23■■■□□ 2.11
SBF1-203ENST00000399627 PLEKHH2Q8IVE3 1493 aa28.22■■■□□ 2.11
SBF1-203ENST00000399627 TRAPPC8Q9Y2L5 1435 aa28.21■■■□□ 2.11
SBF1-203ENST00000399627 PPARGC1BQ86YN6 1023 aaKnown RBP28.21■■■□□ 2.11
SBF1-203ENST00000399627 ZMYM4Q5VZL5 1548 aa28.21■■■□□ 2.11
SBF1-203ENST00000399627 ZNF518AQ6AHZ1 1483 aa28.21■■■□□ 2.11
SBF1-203ENST00000399627 KIAA1107Q9UPP5 1409 aa28.2■■■□□ 2.11
SBF1-203ENST00000399627 HNRNPMP52272 730 aaKnown RBP eCLIP28.2■■■□□ 2.1
SBF1-203ENST00000399627 AFAP1Q8N556 730 aa28.2■■■□□ 2.1
SBF1-203ENST00000399627 CAMSAP2Q08AD1 1489 aa28.19■■■□□ 2.1
SBF1-203ENST00000399627 MIA2Q96PC5 1412 aa28.18■■■□□ 2.1
SBF1-203ENST00000399627 KDM5CP41229 1560 aa28.17■■■□□ 2.1
SBF1-203ENST00000399627 ZFYVE16Q7Z3T8 1539 aa28.13■■■□□ 2.09
SBF1-203ENST00000399627 MAGI2Q86UL8 1455 aa28.12■■■□□ 2.09
SBF1-203ENST00000399627 MBD5Q9P267 1494 aa28.12■■■□□ 2.09
SBF1-203ENST00000399627 ARHGEF40Q8TER5 1519 aa28.12■■■□□ 2.09
SBF1-203ENST00000399627 YEATS2Q9ULM3 1422 aa28.11■■■□□ 2.09
SBF1-203ENST00000399627 HECW2Q9P2P5 1572 aa28.11■■■□□ 2.09
SBF1-203ENST00000399627 FGD6Q6ZV73 1430 aa28.1■■■□□ 2.09
SBF1-203ENST00000399627 PTPN23Q9H3S7 1636 aa28.1■■■□□ 2.09
SBF1-203ENST00000399627 MYT1LQ9UL68 1186 aa28.08■■■□□ 2.09
SBF1-203ENST00000399627 MLH3Q9UHC1 1453 aa28.07■■■□□ 2.08
SBF1-203ENST00000399627 ARHGEF5Q12774 1597 aa28.05■■■□□ 2.08
SBF1-203ENST00000399627 KIDINS220Q9ULH0 1771 aa28.05■■■□□ 2.08
SBF1-203ENST00000399627 CCDC141Q6ZP82 1450 aa28.04■■■□□ 2.08
SBF1-203ENST00000399627 SPAG9O60271 1321 aaKnown RBP28.04■■■□□ 2.08
SBF1-203ENST00000399627 TCOF1Q13428 1488 aaKnown RBP28.02■■■□□ 2.08
SBF1-203ENST00000399627 ABCA6Q8N139 1617 aa28.01■■■□□ 2.07
SBF1-203ENST00000399627 RSPH4AQ5TD94 716 aa28.01■■■□□ 2.07
SBF1-203ENST00000399627 INO80Q9ULG1 1556 aaPredicted RBP28.01■■■□□ 2.07
SBF1-203ENST00000399627 DIP2CQ9Y2E4 1556 aa28.01■■■□□ 2.07
SBF1-203ENST00000399627 ATP7AQ04656 1500 aa28■■■□□ 2.07
SBF1-203ENST00000399627 ATP10AO60312 1499 aa27.99■■■□□ 2.07
SBF1-203ENST00000399627 SIGLEC1Q9BZZ2 1709 aa27.96■■■□□ 2.07
SBF1-203ENST00000399627 C9orf84Q5VXU9 1444 aa27.95■■■□□ 2.07
SBF1-203ENST00000399627 FAM50AQ14320 339 aaKnown RBP27.94■■■□□ 2.06
SBF1-203ENST00000399627 RTEL1-TNFRSF6BF6WH68 1400 aa27.92■■■□□ 2.06
SBF1-203ENST00000399627 TSPY4P0CV99 314 aa27.92■■■□□ 2.06
SBF1-203ENST00000399627 TSPY10P0CW01 314 aa27.92■■■□□ 2.06
SBF1-203ENST00000399627 DNMT1P26358 1616 aaKnown RBP27.92■■■□□ 2.06
SBF1-203ENST00000399627 ARID4BQ4LE39 1312 aaPredicted RBP27.92■■■□□ 2.06
SBF1-203ENST00000399627 ABCC5O15440 1437 aa27.91■■■□□ 2.06
SBF1-203ENST00000399627 CROCC2H7BZ55 1655 aa27.91■■■□□ 2.06
SBF1-203ENST00000399627 MAST1Q9Y2H9 1570 aa27.9■■■□□ 2.06
SBF1-203ENST00000399627 DAPK1P53355 1430 aa27.89■■■□□ 2.06
SBF1-203ENST00000399627 REREQ9P2R6 1566 aa27.89■■■□□ 2.05
SBF1-203ENST00000399627 ADGBQ8N7X0 1667 aa27.87■■■□□ 2.05
SBF1-203ENST00000399627 BCORL1Q5H9F3 1711 aa27.85■■■□□ 2.05
SBF1-203ENST00000399627 KDM4FA0A1W2PPD8 638 aa27.85■■■□□ 2.05
SBF1-203ENST00000399627 SHANK2Q9UPX8 1470 aa27.84■■■□□ 2.05
SBF1-203ENST00000399627 A2MP01023 1474 aa27.83■■■□□ 2.05
SBF1-203ENST00000399627 RRBP1Q9P2E9 1410 aaKnown RBP27.82■■■□□ 2.04
SBF1-203ENST00000399627 AGLP35573 1532 aa27.8■■■□□ 2.04
SBF1-203ENST00000399627 PLXNC1O60486 1568 aa27.8■■■□□ 2.04
SBF1-203ENST00000399627 ADAMTSL3P82987 1691 aa27.79■■■□□ 2.04
SBF1-203ENST00000399627 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.79■■■□□ 2.045e-7■■■■■ 29.7
SBF1-203ENST00000399627 MLECQ14165 292 aa27.79■■■□□ 2.04
SBF1-203ENST00000399627 CHIC2Q9UKJ5 165 aa27.77■■■□□ 2.04
SBF1-203ENST00000399627 DHX29Q7Z478 1369 aaKnown RBP27.76■■■□□ 2.03
SBF1-203ENST00000399627 MADDQ8WXG6 1647 aa27.73■■■□□ 2.03
SBF1-203ENST00000399627 PTPRKQ15262 1439 aa27.73■■■□□ 2.03
SBF1-203ENST00000399627 ITGAEP38570 1179 aa27.71■■■□□ 2.03
SBF1-203ENST00000399627 RRP7BPQ9NSQ0 103 aa27.7■■■□□ 2.02
SBF1-203ENST00000399627 ANKRD30AQ9BXX3 1397 aa27.7■■■□□ 2.02
SBF1-203ENST00000399627 KIF15Q9NS87 1388 aa27.7■■■□□ 2.02
SBF1-203ENST00000399627 ADGRL2O95490 1459 aa27.7■■■□□ 2.02
SBF1-203ENST00000399627 FER1L4A9Z1Z3 1794 aa27.69■■■□□ 2.02
SBF1-203ENST00000399627 NCOA1Q15788 1441 aa27.68■■■□□ 2.02
SBF1-203ENST00000399627 DUOX2Q9NRD8 1548 aa27.68■■■□□ 2.02
SBF1-203ENST00000399627 RIMS1Q86UR5 1692 aaKnown RBP27.67■■■□□ 2.02
SBF1-203ENST00000399627 KIF3BO15066 747 aa27.65■■■□□ 2.02
SBF1-203ENST00000399627 GGT6Q6P531 493 aa27.62■■■□□ 2.01
SBF1-203ENST00000399627 AEBP2Q6ZN18 517 aaPredicted RBP27.62■■■□□ 2.01
SBF1-203ENST00000399627 EIF2AK4Q9P2K8 1649 aaKnown RBP27.62■■■□□ 2.01
SBF1-203ENST00000399627 ROCK1Q13464 1354 aa27.6■■■□□ 2.01
SBF1-203ENST00000399627 PTPRMP28827 1452 aa27.59■■■□□ 2.01
SBF1-203ENST00000399627 ERBINQ96RT1 1412 aa27.58■■■□□ 2.01
SBF1-203ENST00000399627 RNF17Q9BXT8 1623 aaKnown RBP27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms