RNA–Protein interactions for RNA: ENST00000399395.7

SDR39U1-201, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR39U1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-201ENST00000399395 KIF14Q15058 1648 aa29.04■■■□□ 2.24
SDR39U1-201ENST00000399395 SCAPERQ9BY12 1400 aa29.03■■■□□ 2.24
SDR39U1-201ENST00000399395 YEATS2Q9ULM3 1422 aa29.03■■■□□ 2.24
SDR39U1-201ENST00000399395 PCF11O94913 1555 aaKnown RBP29.01■■■□□ 2.24
SDR39U1-201ENST00000399395 CLIP1P30622 1438 aa29■■■□□ 2.23
SDR39U1-201ENST00000399395 TROQ12816 1431 aaPredicted RBP28.98■■■□□ 2.23
SDR39U1-201ENST00000399395 EFCAB2Q5VUJ9 269 aa28.98■■■□□ 2.23
SDR39U1-201ENST00000399395 SIGLEC1Q9BZZ2 1709 aa28.94■■■□□ 2.22
SDR39U1-201ENST00000399395 LMTK3Q96Q04 1460 aa28.94■■■□□ 2.22
SDR39U1-201ENST00000399395 ARHGAP5Q13017 1502 aa28.94■■■□□ 2.22
SDR39U1-201ENST00000399395 FER1L4A9Z1Z3 1794 aa28.91■■■□□ 2.22
SDR39U1-201ENST00000399395 LRRIQ1Q96JM4 1722 aa28.91■■■□□ 2.22
SDR39U1-201ENST00000399395 PLPPR3Q6T4P5 718 aa28.9■■■□□ 2.22
SDR39U1-201ENST00000399395 C9orf84Q5VXU9 1444 aa28.89■■■□□ 2.22
SDR39U1-201ENST00000399395 MLECQ14165 292 aa28.89■■■□□ 2.22
SDR39U1-201ENST00000399395 ZNF518AQ6AHZ1 1483 aa28.89■■■□□ 2.22
SDR39U1-201ENST00000399395 ATP10AO60312 1499 aa28.88■■■□□ 2.21
SDR39U1-201ENST00000399395 CCDC18Q5T9S5 1454 aa28.87■■■□□ 2.21
SDR39U1-201ENST00000399395 CASKIN1Q8WXD9 1431 aa28.83■■■□□ 2.21
SDR39U1-201ENST00000399395 KDM5CP41229 1560 aa28.82■■■□□ 2.2
SDR39U1-201ENST00000399395 ARHGEF12Q9NZN5 1544 aa28.81■■■□□ 2.2
SDR39U1-201ENST00000399395 MYT1LQ9UL68 1186 aa28.81■■■□□ 2.2
SDR39U1-201ENST00000399395 PREX2Q70Z35 1606 aa28.8■■■□□ 2.2
SDR39U1-201ENST00000399395 CDC42BPBQ9Y5S2 1711 aa28.78■■■□□ 2.2
SDR39U1-201ENST00000399395 FBXO41Q8TF61 875 aa28.77■■■□□ 2.2
SDR39U1-201ENST00000399395 FYCO1Q9BQS8 1478 aa28.76■■■□□ 2.19
SDR39U1-201ENST00000399395 HSPA2P54652 639 aa28.75■■■□□ 2.19
SDR39U1-201ENST00000399395 AFAP1Q8N556 730 aa28.75■■■□□ 2.19
SDR39U1-201ENST00000399395 DIP2CQ9Y2E4 1556 aa28.74■■■□□ 2.19
SDR39U1-201ENST00000399395 ABCC1P33527 1531 aa28.74■■■□□ 2.19
SDR39U1-201ENST00000399395 ITSN2Q9NZM3 1697 aa28.7■■■□□ 2.19
SDR39U1-201ENST00000399395 REREQ9P2R6 1566 aa28.7■■■□□ 2.18
SDR39U1-201ENST00000399395 ABCA6Q8N139 1617 aa28.69■■■□□ 2.18
SDR39U1-201ENST00000399395 MLH3Q9UHC1 1453 aa28.69■■■□□ 2.18
SDR39U1-201ENST00000399395 PREX1Q8TCU6 1659 aa28.68■■■□□ 2.18
SDR39U1-201ENST00000399395 CDC42BPAQ5VT25 1732 aa28.67■■■□□ 2.18
SDR39U1-201ENST00000399395 TRAPPC8Q9Y2L5 1435 aa28.66■■■□□ 2.18
SDR39U1-201ENST00000399395 CEBPAP49715 358 aaPredicted RBP28.6■■■□□ 2.17
SDR39U1-201ENST00000399395 AGLP35573 1532 aa28.59■■■□□ 2.17
SDR39U1-201ENST00000399395 ESF1Q9H501 851 aaKnown RBP28.57■■■□□ 2.16
SDR39U1-201ENST00000399395 UHRF1BP1Q6BDS2 1440 aa28.57■■■□□ 2.16
SDR39U1-201ENST00000399395 KIDINS220Q9ULH0 1771 aa28.57■■■□□ 2.16
SDR39U1-201ENST00000399395 ZNF777Q9ULD5 760 aaPredicted RBP28.56■■■□□ 2.16
SDR39U1-201ENST00000399395 SAMD9LQ8IVG5 1584 aa28.55■■■□□ 2.16
SDR39U1-201ENST00000399395 SYCP2Q9BX26 1530 aa28.54■■■□□ 2.16
SDR39U1-201ENST00000399395 C3P01024 1663 aa28.52■■■□□ 2.16
SDR39U1-201ENST00000399395 GPATCH8Q9UKJ3 1502 aaKnown RBP28.52■■■□□ 2.16
SDR39U1-201ENST00000399395 SETD1BQ9UPS6 1966 aaKnown RBP28.51■■■□□ 2.16
SDR39U1-201ENST00000399395 MTUS2Q5JR59 1369 aa28.5■■■□□ 2.15
SDR39U1-201ENST00000399395 PLEKHH2Q8IVE3 1493 aa28.48■■■□□ 2.15
SDR39U1-201ENST00000399395 CNTLNQ9NXG0 1405 aa28.48■■■□□ 2.15
SDR39U1-201ENST00000399395 CCNB3Q8WWL7 1395 aa28.48■■■□□ 2.15
SDR39U1-201ENST00000399395 SPAG9O60271 1321 aaKnown RBP28.47■■■□□ 2.15
SDR39U1-201ENST00000399395 CFDP1Q9UEE9 299 aaPredicted RBP28.45■■■□□ 2.14
SDR39U1-201ENST00000399395 CERKQ8TCT0 537 aa28.44■■■□□ 2.14
SDR39U1-201ENST00000399395 ATP7AQ04656 1500 aa28.43■■■□□ 2.14
SDR39U1-201ENST00000399395 DMRT2Q9Y5R5 561 aa28.43■■■□□ 2.14
SDR39U1-201ENST00000399395 KIAA1107Q9UPP5 1409 aa28.43■■■□□ 2.14
SDR39U1-201ENST00000399395 HNRNPMP52272 730 aaKnown RBP eCLIP28.42■■■□□ 2.14
SDR39U1-201ENST00000399395 STRCQ7RTU9 1775 aa28.41■■■□□ 2.14
SDR39U1-201ENST00000399395 INO80Q9ULG1 1556 aaPredicted RBP28.41■■■□□ 2.14
SDR39U1-201ENST00000399395 EHBP1L1Q8N3D4 1523 aa28.4■■■□□ 2.14
SDR39U1-201ENST00000399395 SUPT6HQ7KZ85 1726 aaKnown RBP28.4■■■□□ 2.14
SDR39U1-201ENST00000399395 MROH2AA6NES4 1674 aa28.39■■■□□ 2.14
SDR39U1-201ENST00000399395 TIAM1Q13009 1591 aa28.36■■■□□ 2.13
SDR39U1-201ENST00000399395 A2MP01023 1474 aa28.34■■■□□ 2.13
SDR39U1-201ENST00000399395 PLXNC1O60486 1568 aa28.34■■■□□ 2.13
SDR39U1-201ENST00000399395 CEP162Q5TB80 1403 aa28.34■■■□□ 2.13
SDR39U1-201ENST00000399395 NPATQ14207 1427 aa28.32■■■□□ 2.12
SDR39U1-201ENST00000399395 PTPRTO14522 1441 aa28.3■■■□□ 2.12
SDR39U1-201ENST00000399395 ADGBQ8N7X0 1667 aa28.29■■■□□ 2.12
SDR39U1-201ENST00000399395 CLTCQ00610 1675 aaKnown RBP28.29■■■□□ 2.12
SDR39U1-201ENST00000399395 ZMYM3Q14202 1370 aa28.27■■■□□ 2.12
SDR39U1-201ENST00000399395 NCOA1Q15788 1441 aa28.26■■■□□ 2.11
SDR39U1-201ENST00000399395 ZNF644Q9H582 1327 aaPredicted RBP28.23■■■□□ 2.11
SDR39U1-201ENST00000399395 GGT6Q6P531 493 aa28.22■■■□□ 2.11
SDR39U1-201ENST00000399395 CAMSAP1Q5T5Y3 1602 aa28.21■■■□□ 2.11
SDR39U1-201ENST00000399395 MBD5Q9P267 1494 aa28.21■■■□□ 2.11
SDR39U1-201ENST00000399395 MYO3AQ8NEV4 1616 aa28.2■■■□□ 2.1
SDR39U1-201ENST00000399395 RTEL1-TNFRSF6BF6WH68 1400 aa28.18■■■□□ 2.1
SDR39U1-201ENST00000399395 ZNF142P52746 1687 aaPredicted RBP28.18■■■□□ 2.1
SDR39U1-201ENST00000399395 NCOA2Q15596 1464 aa28.17■■■□□ 2.1
SDR39U1-201ENST00000399395 CCDC141Q6ZP82 1450 aa28.16■■■□□ 2.1
SDR39U1-201ENST00000399395 CAMSAP2Q08AD1 1489 aa28.15■■■□□ 2.1
SDR39U1-201ENST00000399395 PPP6R1Q9UPN7 881 aa28.15■■■□□ 2.1
SDR39U1-201ENST00000399395 PTPRKQ15262 1439 aa28.15■■■□□ 2.1
SDR39U1-201ENST00000399395 CEP170BQ9Y4F5 1589 aaPredicted RBP28.14■■■□□ 2.1
SDR39U1-201ENST00000399395 DHX29Q7Z478 1369 aaKnown RBP28.11■■■□□ 2.09
SDR39U1-201ENST00000399395 LTBP4Q8N2S1 1624 aa28.1■■■□□ 2.09
SDR39U1-201ENST00000399395 PLA2R1Q13018 1463 aa28.09■■■□□ 2.09
SDR39U1-201ENST00000399395 IQSEC2Q5JU85 1478 aa28.08■■■□□ 2.09
SDR39U1-201ENST00000399395 RSPH4AQ5TD94 716 aa28.06■■■□□ 2.08
SDR39U1-201ENST00000399395 NCKAP5LQ9HCH0 1330 aa28.06■■■□□ 2.08
SDR39U1-201ENST00000399395 PKD2Q13563 968 aa28.05■■■□□ 2.08
SDR39U1-201ENST00000399395 VPS8Q8N3P4 1428 aa28.05■■■□□ 2.08
SDR39U1-201ENST00000399395 FAM135AQ9P2D6 1515 aa28.05■■■□□ 2.08
SDR39U1-201ENST00000399395 KDM5DQ9BY66 1539 aa28.04■■■□□ 2.08
SDR39U1-201ENST00000399395 KIF3BO15066 747 aa28.04■■■□□ 2.08
SDR39U1-201ENST00000399395 ARHGEF5Q12774 1597 aa28.03■■■□□ 2.08
SDR39U1-201ENST00000399395 A2ML1A8K2U0 1454 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms