RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 GPATCH8Q9UKJ3 1502 aaKnown RBP27.67■■■□□ 2.02
CTNS-203ENST00000399306 AKNAQ7Z591 1439 aa27.66■■■□□ 2.02
CTNS-203ENST00000399306 CCNB3Q8WWL7 1395 aa27.65■■■□□ 2.02
CTNS-203ENST00000399306 NCOA2Q15596 1464 aa27.64■■■□□ 2.02
CTNS-203ENST00000399306 KANK4Q5T7N3 995 aaPredicted RBP27.64■■■□□ 2.02
CTNS-203ENST00000399306 ARHGAP5Q13017 1502 aa27.63■■■□□ 2.01
CTNS-203ENST00000399306 ITSN2Q9NZM3 1697 aa27.62■■■□□ 2.01
CTNS-203ENST00000399306 COL17A1Q9UMD9 1497 aaPredicted RBP27.62■■■□□ 2.01
CTNS-203ENST00000399306 ADGRL1O94910 1474 aa27.56■■■□□ 2
CTNS-203ENST00000399306 DENND4BO75064 1496 aaPredicted RBP27.55■■■□□ 2
CTNS-203ENST00000399306 CFDP1Q9UEE9 299 aaPredicted RBP27.54■■■□□ 2
CTNS-203ENST00000399306 PLEKHH2Q8IVE3 1493 aa27.53■■■□□ 2
CTNS-203ENST00000399306 SCAPERQ9BY12 1400 aa27.51■■□□□ 1.99
CTNS-203ENST00000399306 ABCC1P33527 1531 aa27.51■■□□□ 1.99
CTNS-203ENST00000399306 KIAA1107Q9UPP5 1409 aa27.5■■□□□ 1.99
CTNS-203ENST00000399306 RICTORQ6R327 1708 aa27.5■■□□□ 1.99
CTNS-203ENST00000399306 MIA2Q96PC5 1412 aa27.5■■□□□ 1.99
CTNS-203ENST00000399306 MYOM3Q5VTT5 1437 aa27.49■■□□□ 1.99
CTNS-203ENST00000399306 SAMD9LQ8IVG5 1584 aa27.48■■□□□ 1.99
CTNS-203ENST00000399306 POGZQ7Z3K3 1410 aa27.48■■□□□ 1.99
CTNS-203ENST00000399306 FRMPD1Q5SYB0 1578 aa27.48■■□□□ 1.99
CTNS-203ENST00000399306 ZMYM4Q5VZL5 1548 aa27.46■■□□□ 1.99
CTNS-203ENST00000399306 ZNF518AQ6AHZ1 1483 aa27.45■■□□□ 1.99
CTNS-203ENST00000399306 MAGI2Q86UL8 1455 aa27.44■■□□□ 1.98
CTNS-203ENST00000399306 RAPGEF3O95398 923 aa27.42■■□□□ 1.98
CTNS-203ENST00000399306 KDM5CP41229 1560 aa27.41■■□□□ 1.98
CTNS-203ENST00000399306 ZNF777Q9ULD5 760 aaPredicted RBP27.4■■□□□ 1.98
CTNS-203ENST00000399306 ARHGEF12Q9NZN5 1544 aa27.4■■□□□ 1.98
CTNS-203ENST00000399306 RSPH4AQ5TD94 716 aa27.38■■□□□ 1.97
CTNS-203ENST00000399306 CAMSAP2Q08AD1 1489 aa27.38■■□□□ 1.97
CTNS-203ENST00000399306 SYCP2Q9BX26 1530 aa27.37■■□□□ 1.97
CTNS-203ENST00000399306 MBD5Q9P267 1494 aa27.35■■□□□ 1.97
CTNS-203ENST00000399306 FGD6Q6ZV73 1430 aa27.34■■□□□ 1.97
CTNS-203ENST00000399306 TRAPPC8Q9Y2L5 1435 aa27.34■■□□□ 1.97
CTNS-203ENST00000399306 MLH3Q9UHC1 1453 aa27.34■■□□□ 1.97
CTNS-203ENST00000399306 ARHGEF5Q12774 1597 aa27.33■■□□□ 1.97
CTNS-203ENST00000399306 ZNF644Q9H582 1327 aaPredicted RBP27.32■■□□□ 1.96
CTNS-203ENST00000399306 TCOF1Q13428 1488 aaKnown RBP27.32■■□□□ 1.96
CTNS-203ENST00000399306 AFAP1Q8N556 730 aa27.31■■□□□ 1.96
CTNS-203ENST00000399306 HECW2Q9P2P5 1572 aa27.31■■□□□ 1.96
CTNS-203ENST00000399306 HNRNPMP52272 730 aaKnown RBP eCLIP27.3■■□□□ 1.96
CTNS-203ENST00000399306 ARHGEF40Q8TER5 1519 aa27.3■■□□□ 1.96
CTNS-203ENST00000399306 PTPN23Q9H3S7 1636 aa27.3■■□□□ 1.96
CTNS-203ENST00000399306 ZFYVE16Q7Z3T8 1539 aa27.28■■□□□ 1.96
CTNS-203ENST00000399306 CCDC141Q6ZP82 1450 aa27.27■■□□□ 1.96
CTNS-203ENST00000399306 RTEL1-TNFRSF6BF6WH68 1400 aa27.24■■□□□ 1.95
CTNS-203ENST00000399306 SPAG9O60271 1321 aaKnown RBP27.23■■□□□ 1.95
CTNS-203ENST00000399306 KIDINS220Q9ULH0 1771 aa27.22■■□□□ 1.95
CTNS-203ENST00000399306 INO80Q9ULG1 1556 aaPredicted RBP27.22■■□□□ 1.95
CTNS-203ENST00000399306 YEATS2Q9ULM3 1422 aa27.21■■□□□ 1.95
CTNS-203ENST00000399306 ATP10AO60312 1499 aa27.2■■□□□ 1.95
CTNS-203ENST00000399306 REREQ9P2R6 1566 aa27.2■■□□□ 1.94
CTNS-203ENST00000399306 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.2■■□□□ 1.94
CTNS-203ENST00000399306 ATP7AQ04656 1500 aa27.19■■□□□ 1.94
CTNS-203ENST00000399306 DIP2CQ9Y2E4 1556 aa27.18■■□□□ 1.94
CTNS-203ENST00000399306 MAST1Q9Y2H9 1570 aa27.18■■□□□ 1.94
CTNS-203ENST00000399306 TSPY4P0CV99 314 aa27.17■■□□□ 1.94
CTNS-203ENST00000399306 TSPY10P0CW01 314 aa27.17■■□□□ 1.94
CTNS-203ENST00000399306 C9orf84Q5VXU9 1444 aa27.16■■□□□ 1.94
CTNS-203ENST00000399306 DNMT1P26358 1616 aaKnown RBP27.16■■□□□ 1.94
CTNS-203ENST00000399306 SHANK2Q9UPX8 1470 aa27.15■■□□□ 1.94
CTNS-203ENST00000399306 ABCA6Q8N139 1617 aa27.15■■□□□ 1.94
CTNS-203ENST00000399306 PPARGC1BQ86YN6 1023 aaKnown RBP27.14■■□□□ 1.94
CTNS-203ENST00000399306 MYT1LQ9UL68 1186 aa27.13■■□□□ 1.93
CTNS-203ENST00000399306 RRBP1Q9P2E9 1410 aaKnown RBP27.13■■□□□ 1.93
CTNS-203ENST00000399306 CROCC2H7BZ55 1655 aa27.12■■□□□ 1.93
CTNS-203ENST00000399306 ABCC5O15440 1437 aa27.11■■□□□ 1.93
CTNS-203ENST00000399306 DAPK1P53355 1430 aa27.1■■□□□ 1.93
CTNS-203ENST00000399306 ADGBQ8N7X0 1667 aa27.1■■□□□ 1.93
CTNS-203ENST00000399306 AGLP35573 1532 aa27.09■■□□□ 1.93
CTNS-203ENST00000399306 PLXNC1O60486 1568 aa27.06■■□□□ 1.92
CTNS-203ENST00000399306 FAM50AQ14320 339 aaKnown RBP27.06■■□□□ 1.92
CTNS-203ENST00000399306 A2MP01023 1474 aa27.04■■□□□ 1.92
CTNS-203ENST00000399306 DHX29Q7Z478 1369 aaKnown RBP27.01■■□□□ 1.91
CTNS-203ENST00000399306 BCORL1Q5H9F3 1711 aa27.01■■□□□ 1.91
CTNS-203ENST00000399306 SIGLEC1Q9BZZ2 1709 aa27.01■■□□□ 1.91
CTNS-203ENST00000399306 ADGRL2O95490 1459 aa27■■□□□ 1.91
CTNS-203ENST00000399306 ARID4BQ4LE39 1312 aaPredicted RBP26.98■■□□□ 1.91
CTNS-203ENST00000399306 ANKRD30AQ9BXX3 1397 aa26.97■■□□□ 1.91
CTNS-203ENST00000399306 ADAMTSL3P82987 1691 aa26.95■■□□□ 1.91
CTNS-203ENST00000399306 DUOX2Q9NRD8 1548 aa26.95■■□□□ 1.9
CTNS-203ENST00000399306 NCOA1Q15788 1441 aa26.94■■□□□ 1.9
CTNS-203ENST00000399306 ROCK1Q13464 1354 aa26.94■■□□□ 1.9
CTNS-203ENST00000399306 KDM4FA0A1W2PPD8 638 aa26.92■■□□□ 1.9
CTNS-203ENST00000399306 KIF15Q9NS87 1388 aa26.91■■□□□ 1.9
CTNS-203ENST00000399306 EIF2AK4Q9P2K8 1649 aaKnown RBP26.9■■□□□ 1.9
CTNS-203ENST00000399306 PTPRKQ15262 1439 aa26.9■■□□□ 1.9
CTNS-203ENST00000399306 PPP6R1Q9UPN7 881 aa26.89■■□□□ 1.9
CTNS-203ENST00000399306 ERBINQ96RT1 1412 aa26.89■■□□□ 1.89
CTNS-203ENST00000399306 FAM135AQ9P2D6 1515 aa26.85■■□□□ 1.89
CTNS-203ENST00000399306 CHIC2Q9UKJ5 165 aa26.85■■□□□ 1.89
CTNS-203ENST00000399306 RRP7BPQ9NSQ0 103 aa26.83■■□□□ 1.89
CTNS-203ENST00000399306 MADDQ8WXG6 1647 aa26.83■■□□□ 1.88
CTNS-203ENST00000399306 FER1L4A9Z1Z3 1794 aa26.82■■□□□ 1.88
CTNS-203ENST00000399306 RNF17Q9BXT8 1623 aaKnown RBP26.82■■□□□ 1.88
CTNS-203ENST00000399306 CNTLNQ9NXG0 1405 aa26.82■■□□□ 1.88
CTNS-203ENST00000399306 KIF3BO15066 747 aa26.8■■□□□ 1.88
CTNS-203ENST00000399306 MLECQ14165 292 aa26.79■■□□□ 1.88
CTNS-203ENST00000399306 ANKRD50Q9ULJ7 1429 aa26.76■■□□□ 1.87
CTNS-203ENST00000399306 ITGAEP38570 1179 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms