RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 PPP1R15AO75807 674 aaPredicted RBP10.98□□□□□ -0.65
CTNND1-205ENST00000399050 FOXD1Q16676 465 aa10.98□□□□□ -0.65
CTNND1-205ENST00000399050 RSPH6AQ9H0K4 717 aa10.98□□□□□ -0.65
CTNND1-205ENST00000399050 BAZ1AQ9NRL2 1556 aaPredicted RBP10.97□□□□□ -0.65
CTNND1-205ENST00000399050 RALBP1Q15311 655 aa10.97□□□□□ -0.65
CTNND1-205ENST00000399050 GOLGA6L4A6NEF3 574 aa10.97□□□□□ -0.65
CTNND1-205ENST00000399050 NRDCO43847 1150 aa10.97□□□□□ -0.65
CTNND1-205ENST00000399050 MCCP23508 829 aa10.96□□□□□ -0.65
CTNND1-205ENST00000399050 C14orf37Q86TY3 774 aa10.96□□□□□ -0.65
CTNND1-205ENST00000399050 CCDC88BA6NC98 1476 aa10.96□□□□□ -0.66
CTNND1-205ENST00000399050 HSP90AA2PQ14568 343 aaPredicted RBP10.95□□□□□ -0.66
CTNND1-205ENST00000399050 CECR2Q9BXF3 1484 aa10.95□□□□□ -0.66
CTNND1-205ENST00000399050 GSE1Q14687 1217 aa10.95□□□□□ -0.66
CTNND1-205ENST00000399050 KIAA2012Q0VF49 1180 aa10.95□□□□□ -0.66
CTNND1-205ENST00000399050 RWDD1Q9H446 243 aaPredicted RBP10.95□□□□□ -0.66
CTNND1-205ENST00000399050 TAOK2Q9UL54 1235 aa10.95□□□□□ -0.66
CTNND1-205ENST00000399050 PLEKHG5O94827 1062 aa10.95□□□□□ -0.66
CTNND1-205ENST00000399050 KCNJ4P48050 445 aa10.95□□□□□ -0.66
CTNND1-205ENST00000399050 CFAP44Q96MT7 982 aa10.95□□□□□ -0.66
CTNND1-205ENST00000399050 MFAP1P55081 439 aaKnown RBP10.94□□□□□ -0.66
CTNND1-205ENST00000399050 OS9Q13438 667 aaPredicted RBP10.94□□□□□ -0.66
CTNND1-205ENST00000399050 NACADO15069 1562 aa10.94□□□□□ -0.66
CTNND1-205ENST00000399050 PMFBP1Q8TBY8 1022 aa10.93□□□□□ -0.66
CTNND1-205ENST00000399050 FGD1P98174 961 aa10.93□□□□□ -0.66
CTNND1-205ENST00000399050 MORC1Q86VD1 984 aa10.93□□□□□ -0.66
CTNND1-205ENST00000399050 PDE4AP27815 886 aa10.93□□□□□ -0.66
CTNND1-205ENST00000399050 DHX57Q6P158 1386 aaKnown RBP10.93□□□□□ -0.66
CTNND1-205ENST00000399050 NAP1L2Q9ULW6 460 aaPredicted RBP10.92□□□□□ -0.66
CTNND1-205ENST00000399050 CARMIL1Q5VZK9 1371 aa10.92□□□□□ -0.66
CTNND1-205ENST00000399050 SLC4A3P48751 1232 aa10.92□□□□□ -0.66
CTNND1-205ENST00000399050 MPHOSPH9Q99550 1183 aa10.92□□□□□ -0.66
CTNND1-205ENST00000399050 ROCK2O75116 1388 aaKnown RBP10.91□□□□□ -0.66
CTNND1-205ENST00000399050 ITPRIPQ8IWB1 547 aa10.91□□□□□ -0.66
CTNND1-205ENST00000399050 EIF4G1Q04637 1599 aaKnown RBP10.91□□□□□ -0.66
CTNND1-205ENST00000399050 POGKQ9P215 609 aa10.9□□□□□ -0.66
CTNND1-205ENST00000399050 PKD2Q13563 968 aa10.9□□□□□ -0.66
CTNND1-205ENST00000399050 CUX2O14529 1486 aa10.89□□□□□ -0.67
CTNND1-205ENST00000399050 IPO8O15397 1037 aaKnown RBP10.89□□□□□ -0.67
CTNND1-205ENST00000399050 VSIG10Q8N0Z9 540 aa10.89□□□□□ -0.67
CTNND1-205ENST00000399050 SYAP1Q96A49 352 aaPredicted RBP10.89□□□□□ -0.67
CTNND1-205ENST00000399050 FOXD4L1Q9NU39 408 aa10.89□□□□□ -0.67
CTNND1-205ENST00000399050 PDE3BQ13370 1112 aa10.89□□□□□ -0.67
CTNND1-205ENST00000399050 APBB1O00213 710 aa10.89□□□□□ -0.67
CTNND1-205ENST00000399050 GOLGA2Q08379 1002 aa10.88□□□□□ -0.67
CTNND1-205ENST00000399050 CALD1Q05682 793 aaKnown RBP10.88□□□□□ -0.67
CTNND1-205ENST00000399050 FAM161AQ3B820 660 aa10.87□□□□□ -0.67
CTNND1-205ENST00000399050 EXOC6Q8TAG9 804 aa10.87□□□□□ -0.67
CTNND1-205ENST00000399050 ZBED9Q6R2W3 1325 aa10.87□□□□□ -0.67
CTNND1-205ENST00000399050 DDX11L8A8MPP1 907 aa10.87□□□□□ -0.67
CTNND1-205ENST00000399050 FMN1Q68DA7 1419 aa10.87□□□□□ -0.67
CTNND1-205ENST00000399050 MROH2BQ7Z745 1585 aa10.86□□□□□ -0.67
CTNND1-205ENST00000399050 A0A0G2JS52 829 aa10.86□□□□□ -0.67
CTNND1-205ENST00000399050 CENPQQ7L2Z9 268 aaPredicted RBP10.86□□□□□ -0.67
CTNND1-205ENST00000399050 RRP1P56182 461 aaKnown RBP10.86□□□□□ -0.67
CTNND1-205ENST00000399050 L3MBTL2Q969R5 705 aa10.86□□□□□ -0.67
CTNND1-205ENST00000399050 CCDC146Q8IYE0 955 aa10.86□□□□□ -0.67
CTNND1-205ENST00000399050 PLIN1O60240 522 aa10.85□□□□□ -0.67
CTNND1-205ENST00000399050 KIF15Q9NS87 1388 aa10.84□□□□□ -0.67
CTNND1-205ENST00000399050 NLRP13Q86W25 1043 aa10.84□□□□□ -0.67
CTNND1-205ENST00000399050 CRBNQ96SW2 442 aa10.84□□□□□ -0.67
CTNND1-205ENST00000399050 CENPJQ9HC77 1338 aaPredicted RBP10.83□□□□□ -0.68
CTNND1-205ENST00000399050 TNNT3P45378 269 aaPredicted RBP10.83□□□□□ -0.68
CTNND1-205ENST00000399050 KIAA1211Q6ZU35 1233 aa10.83□□□□□ -0.68
CTNND1-205ENST00000399050 SRPK2P78362 688 aaKnown RBP10.83□□□□□ -0.68
CTNND1-205ENST00000399050 MYBBP1AQ9BQG0 1328 aaKnown RBP10.83□□□□□ -0.68
CTNND1-205ENST00000399050 SMC4Q9NTJ3 1288 aa10.82□□□□□ -0.68
CTNND1-205ENST00000399050 TULP1O00294 542 aaPredicted RBP10.82□□□□□ -0.68
CTNND1-205ENST00000399050 U2AF1L5P0DN76 240 aaPredicted RBP10.82□□□□□ -0.68
CTNND1-205ENST00000399050 U2AF1Q01081 240 aaKnown RBP eCLIP10.82□□□□□ -0.682e-10■■□□□ 12.3
CTNND1-205ENST00000399050 CLUAP1Q96AJ1 413 aa10.82□□□□□ -0.68
CTNND1-205ENST00000399050 WIZO95785 1651 aa10.82□□□□□ -0.68
CTNND1-205ENST00000399050 PRKRIP1Q9H875 184 aaPredicted RBP10.82□□□□□ -0.68
CTNND1-205ENST00000399050 KANK1Q14678 1352 aa10.81□□□□□ -0.68
CTNND1-205ENST00000399050 PHLDB1Q86UU1 1377 aa10.81□□□□□ -0.68
CTNND1-205ENST00000399050 SAFB2Q14151 953 aaKnown RBP eCLIP10.8□□□□□ -0.68
CTNND1-205ENST00000399050 PHF14O94880 888 aa10.79□□□□□ -0.68
CTNND1-205ENST00000399050 SKOR2Q2VWA4 1001 aaPredicted RBP10.79□□□□□ -0.68
CTNND1-205ENST00000399050 FOXD4L5Q5VV16 416 aaPredicted RBP10.79□□□□□ -0.68
CTNND1-205ENST00000399050 FOXD4L4Q8WXT5 416 aaPredicted RBP10.79□□□□□ -0.68
CTNND1-205ENST00000399050 NUP155O75694 1391 aa10.79□□□□□ -0.68
CTNND1-205ENST00000399050 HAP1P54257 671 aaPredicted RBP10.79□□□□□ -0.68
CTNND1-205ENST00000399050 NOL8Q76FK4 1167 aaKnown RBP10.78□□□□□ -0.68
CTNND1-205ENST00000399050 RAPGEF2Q9Y4G8 1499 aa10.78□□□□□ -0.68
CTNND1-205ENST00000399050 HTATSF1O43719 755 aaKnown RBP10.78□□□□□ -0.68
CTNND1-205ENST00000399050 CSPP1Q1MSJ5 1256 aa10.78□□□□□ -0.68
CTNND1-205ENST00000399050 DDX49Q9Y6V7 483 aaKnown RBP10.78□□□□□ -0.68
CTNND1-205ENST00000399050 GNL2Q13823 731 aaKnown RBP10.77□□□□□ -0.68
CTNND1-205ENST00000399050 RTF1Q92541 710 aaKnown RBP10.77□□□□□ -0.68
CTNND1-205ENST00000399050 ST18O60284 1047 aa10.77□□□□□ -0.69
CTNND1-205ENST00000399050 TRIM6-TRIM34B2RNG4 842 aa10.76□□□□□ -0.69
CTNND1-205ENST00000399050 TPM4P67936 248 aa10.76□□□□□ -0.69
CTNND1-205ENST00000399050 SOX12O15370 315 aa10.76□□□□□ -0.69
CTNND1-205ENST00000399050 EIF3AQ14152 1382 aaKnown RBP10.75□□□□□ -0.69
CTNND1-205ENST00000399050 NFKBIBQ15653 356 aa10.75□□□□□ -0.69
CTNND1-205ENST00000399050 ANKRD30AQ9BXX3 1397 aa10.75□□□□□ -0.69
CTNND1-205ENST00000399050 TOP2AP11388 1531 aaKnown RBP10.75□□□□□ -0.69
CTNND1-205ENST00000399050 HDGFL2Q7Z4V5 671 aaPredicted RBP10.75□□□□□ -0.69
CTNND1-205ENST00000399050 STK26Q9P289 416 aa10.73□□□□□ -0.69
CTNND1-205ENST00000399050 ANO8Q9HCE9 1232 aaPredicted RBP10.73□□□□□ -0.69
CTNND1-205ENST00000399050 PANK3Q9H999 370 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms