RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 ARAP3Q8WWN8 1544 aa25.29■■□□□ 1.64
CDH23-204ENST00000398792 ARHGAP5Q13017 1502 aa25.28■■□□□ 1.64
CDH23-204ENST00000398792 PLCH2O75038 1416 aa25.27■■□□□ 1.64
CDH23-204ENST00000398792 DNAJC5Q9H3Z4 198 aa25.26■■□□□ 1.63
CDH23-204ENST00000398792 SAMD9LQ8IVG5 1584 aa25.26■■□□□ 1.63
CDH23-204ENST00000398792 DNMT1P26358 1616 aaKnown RBP25.24■■□□□ 1.63
CDH23-204ENST00000398792 ZNF644Q9H582 1327 aaPredicted RBP25.22■■□□□ 1.63
CDH23-204ENST00000398792 GLI2P10070 1586 aa25.22■■□□□ 1.63
CDH23-204ENST00000398792 DIP2BQ9P265 1576 aa25.22■■□□□ 1.63
CDH23-204ENST00000398792 ITGAEP38570 1179 aa25.19■■□□□ 1.62
CDH23-204ENST00000398792 ZNF777Q9ULD5 760 aaPredicted RBP25.19■■□□□ 1.62
CDH23-204ENST00000398792 MAP3K4Q9Y6R4 1608 aa25.18■■□□□ 1.62
CDH23-204ENST00000398792 DAPK1P53355 1430 aa25.17■■□□□ 1.62
CDH23-204ENST00000398792 CROCC2H7BZ55 1655 aa25.17■■□□□ 1.62
CDH23-204ENST00000398792 PTPRKQ15262 1439 aa25.17■■□□□ 1.62
CDH23-204ENST00000398792 ARHGEF5Q12774 1597 aa25.16■■□□□ 1.62
CDH23-204ENST00000398792 ABCC1P33527 1531 aa25.15■■□□□ 1.62
CDH23-204ENST00000398792 SYCP2Q9BX26 1530 aa25.15■■□□□ 1.62
CDH23-204ENST00000398792 PLEKHH2Q8IVE3 1493 aa25.15■■□□□ 1.62
CDH23-204ENST00000398792 ABCC5O15440 1437 aa25.15■■□□□ 1.62
CDH23-204ENST00000398792 CD109Q6YHK3 1445 aa25.15■■□□□ 1.62
CDH23-204ENST00000398792 FANCAO15360 1455 aa25.14■■□□□ 1.62
CDH23-204ENST00000398792 CFAP74Q9C0B2 1584 aa25.13■■□□□ 1.61
CDH23-204ENST00000398792 EFCAB2Q5VUJ9 269 aa25.12■■□□□ 1.61
CDH23-204ENST00000398792 MBD5Q9P267 1494 aa25.12■■□□□ 1.61
CDH23-204ENST00000398792 KIAA1107Q9UPP5 1409 aa25.11■■□□□ 1.61
CDH23-204ENST00000398792 CCDC141Q6ZP82 1450 aa25.09■■□□□ 1.61
CDH23-204ENST00000398792 SHANK2Q9UPX8 1470 aa25.09■■□□□ 1.61
CDH23-204ENST00000398792 KIF13AQ9H1H9 1805 aa25.08■■□□□ 1.61
CDH23-204ENST00000398792 ADGBQ8N7X0 1667 aa25.07■■□□□ 1.6
CDH23-204ENST00000398792 ARHGEF12Q9NZN5 1544 aa25.07■■□□□ 1.6
CDH23-204ENST00000398792 AKNAQ7Z591 1439 aa25.06■■□□□ 1.6
CDH23-204ENST00000398792 GCC2Q8IWJ2 1684 aa25.04■■□□□ 1.6
CDH23-204ENST00000398792 FAM69CQ0P6D2 419 aa25.04■■□□□ 1.6
CDH23-204ENST00000398792 HFM1A2PYH4 1435 aa25.03■■□□□ 1.6
CDH23-204ENST00000398792 ADGRL1O94910 1474 aa25.03■■□□□ 1.6
CDH23-204ENST00000398792 HNRNPMP52272 730 aaKnown RBP eCLIP25.03■■□□□ 1.6
CDH23-204ENST00000398792 ADGRL2O95490 1459 aa25.03■■□□□ 1.6
CDH23-204ENST00000398792 ROCK1Q13464 1354 aa25.02■■□□□ 1.6
CDH23-204ENST00000398792 NEO1Q92859 1461 aa25.02■■□□□ 1.6
CDH23-204ENST00000398792 MAST1Q9Y2H9 1570 aa25.01■■□□□ 1.59
CDH23-204ENST00000398792 PPRC1Q5VV67 1664 aaKnown RBP25.01■■□□□ 1.59
CDH23-204ENST00000398792 C9orf84Q5VXU9 1444 aa25.01■■□□□ 1.59
CDH23-204ENST00000398792 SETD5Q9C0A6 1442 aa25■■□□□ 1.59
CDH23-204ENST00000398792 RSPH4AQ5TD94 716 aa24.99■■□□□ 1.59
CDH23-204ENST00000398792 CHIC2Q9UKJ5 165 aa24.99■■□□□ 1.59
CDH23-204ENST00000398792 NAIPQ13075 1403 aa24.99■■□□□ 1.59
CDH23-204ENST00000398792 TRAPPC8Q9Y2L5 1435 aa24.97■■□□□ 1.59
CDH23-204ENST00000398792 SCAPERQ9BY12 1400 aa24.96■■□□□ 1.59
CDH23-204ENST00000398792 RAB3GAP2Q9H2M9 1393 aa24.96■■□□□ 1.59
CDH23-204ENST00000398792 TSPOAP1O95153 1857 aa24.94■■□□□ 1.58
CDH23-204ENST00000398792 TEX14Q8IWB6 1497 aa24.94■■□□□ 1.58
CDH23-204ENST00000398792 NCOA1Q15788 1441 aa24.94■■□□□ 1.58
CDH23-204ENST00000398792 TSPY4P0CV99 314 aa24.93■■□□□ 1.58
CDH23-204ENST00000398792 TSPY10P0CW01 314 aa24.93■■□□□ 1.58
CDH23-204ENST00000398792 PLXNC1O60486 1568 aa24.92■■□□□ 1.58
CDH23-204ENST00000398792 ANKRD30AQ9BXX3 1397 aa24.92■■□□□ 1.58
CDH23-204ENST00000398792 RRP7BPQ9NSQ0 103 aa24.91■■□□□ 1.58
CDH23-204ENST00000398792 ZFYVE16Q7Z3T8 1539 aa24.9■■□□□ 1.58
CDH23-204ENST00000398792 POGZQ7Z3K3 1410 aa24.9■■□□□ 1.58
CDH23-204ENST00000398792 INO80Q9ULG1 1556 aaPredicted RBP24.9■■□□□ 1.58
CDH23-204ENST00000398792 ZNF518AQ6AHZ1 1483 aa24.9■■□□□ 1.58
CDH23-204ENST00000398792 KDM5CP41229 1560 aa24.88■■□□□ 1.57
CDH23-204ENST00000398792 KDM6BO15054 1643 aa24.87■■□□□ 1.57
CDH23-204ENST00000398792 RTEL1-TNFRSF6BF6WH68 1400 aa24.85■■□□□ 1.57
CDH23-204ENST00000398792 DENND4BO75064 1496 aaPredicted RBP24.85■■□□□ 1.57
CDH23-204ENST00000398792 ATP7AQ04656 1500 aa24.85■■□□□ 1.57
CDH23-204ENST00000398792 RICTORQ6R327 1708 aa24.84■■□□□ 1.57
CDH23-204ENST00000398792 AFAP1Q8N556 730 aa24.84■■□□□ 1.57
CDH23-204ENST00000398792 KIF15Q9NS87 1388 aa24.84■■□□□ 1.57
CDH23-204ENST00000398792 HRCP23327 699 aa24.83■■□□□ 1.57
CDH23-204ENST00000398792 SPAG9O60271 1321 aaKnown RBP24.82■■□□□ 1.56
CDH23-204ENST00000398792 FRMPD1Q5SYB0 1578 aa24.82■■□□□ 1.56
CDH23-204ENST00000398792 HECW2Q9P2P5 1572 aa24.81■■□□□ 1.56
CDH23-204ENST00000398792 KIDINS220Q9ULH0 1771 aa24.79■■□□□ 1.56
CDH23-204ENST00000398792 ANKRD50Q9ULJ7 1429 aa24.79■■□□□ 1.56
CDH23-204ENST00000398792 DUOX2Q9NRD8 1548 aa24.78■■□□□ 1.56
CDH23-204ENST00000398792 MLH3Q9UHC1 1453 aa24.77■■□□□ 1.56
CDH23-204ENST00000398792 DHX57Q6P158 1386 aaKnown RBP24.76■■□□□ 1.55
CDH23-204ENST00000398792 ZMYM4Q5VZL5 1548 aa24.75■■□□□ 1.55
CDH23-204ENST00000398792 CCER1Q8TC90 406 aaPredicted RBP24.73■■□□□ 1.55
CDH23-204ENST00000398792 ERBINQ96RT1 1412 aa24.73■■□□□ 1.55
CDH23-204ENST00000398792 RAPGEF3O95398 923 aa24.72■■□□□ 1.55
CDH23-204ENST00000398792 ABCA6Q8N139 1617 aa24.71■■□□□ 1.55
CDH23-204ENST00000398792 TRHP20396 242 aaPredicted RBP24.7■■□□□ 1.54
CDH23-204ENST00000398792 ACIN1Q9UKV3 1341 aaKnown RBP24.68■■□□□ 1.54
CDH23-204ENST00000398792 DIP2CQ9Y2E4 1556 aa24.67■■□□□ 1.54
CDH23-204ENST00000398792 COL17A1Q9UMD9 1497 aaPredicted RBP24.67■■□□□ 1.54
CDH23-204ENST00000398792 UNC13BO14795 1591 aa24.66■■□□□ 1.54
CDH23-204ENST00000398792 EIF2AK4Q9P2K8 1649 aaKnown RBP24.66■■□□□ 1.54
CDH23-204ENST00000398792 MYT1LQ9UL68 1186 aa24.65■■□□□ 1.54
CDH23-204ENST00000398792 KDM5DQ9BY66 1539 aa24.65■■□□□ 1.54
CDH23-204ENST00000398792 MAGI2Q86UL8 1455 aa24.63■■□□□ 1.53
CDH23-204ENST00000398792 A2MP01023 1474 aa24.62■■□□□ 1.53
CDH23-204ENST00000398792 YEATS2Q9ULM3 1422 aa24.61■■□□□ 1.53
CDH23-204ENST00000398792 DHX29Q7Z478 1369 aaKnown RBP24.61■■□□□ 1.53
CDH23-204ENST00000398792 TRIM52Q96A61 297 aa24.61■■□□□ 1.53
CDH23-204ENST00000398792 DEPDC5O75140 1603 aa24.59■■□□□ 1.53
CDH23-204ENST00000398792 PZPP20742 1482 aa24.59■■□□□ 1.53
CDH23-204ENST00000398792 CLSPNQ9HAW4 1339 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms