RNA–Protein interactions for RNA: ENST00000398518.6

MEG3-204, Transcript of maternally expressed 3, humanhuman

TSL 2

Gene MEG3, Length 1,674 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-204ENST00000398518 ARHGAP5Q13017 1502 aa24.09■■□□□ 1.45
MEG3-204ENST00000398518 SAMD9LQ8IVG5 1584 aa24.08■■□□□ 1.45
MEG3-204ENST00000398518 GPATCH8Q9UKJ3 1502 aaKnown RBP24.07■■□□□ 1.44
MEG3-204ENST00000398518 ITSN2Q9NZM3 1697 aa24.06■■□□□ 1.44
MEG3-204ENST00000398518 AKNAQ7Z591 1439 aa24.06■■□□□ 1.44
MEG3-204ENST00000398518 KANK4Q5T7N3 995 aaPredicted RBP24.05■■□□□ 1.44
MEG3-204ENST00000398518 ABCC1P33527 1531 aa24.05■■□□□ 1.44
MEG3-204ENST00000398518 NCOA2Q15596 1464 aa24.05■■□□□ 1.44
MEG3-204ENST00000398518 ADGRL1O94910 1474 aa24.03■■□□□ 1.44
MEG3-204ENST00000398518 ARHGEF12Q9NZN5 1544 aa24.02■■□□□ 1.44
MEG3-204ENST00000398518 SIGLEC1Q9BZZ2 1709 aa24.01■■□□□ 1.43
MEG3-204ENST00000398518 ZMYM4Q5VZL5 1548 aa23.98■■□□□ 1.43
MEG3-204ENST00000398518 RAPGEF3O95398 923 aa23.98■■□□□ 1.43
MEG3-204ENST00000398518 SYCP2Q9BX26 1530 aa23.97■■□□□ 1.43
MEG3-204ENST00000398518 POGZQ7Z3K3 1410 aa23.97■■□□□ 1.43
MEG3-204ENST00000398518 KDM5CP41229 1560 aa23.96■■□□□ 1.43
MEG3-204ENST00000398518 DENND4BO75064 1496 aaPredicted RBP23.96■■□□□ 1.43
MEG3-204ENST00000398518 PHLDB1Q86UU1 1377 aa23.96■■□□□ 1.43
MEG3-204ENST00000398518 SCAPERQ9BY12 1400 aa23.95■■□□□ 1.42
MEG3-204ENST00000398518 ARHGEF40Q8TER5 1519 aa23.94■■□□□ 1.42
MEG3-204ENST00000398518 CCNB3Q8WWL7 1395 aa23.93■■□□□ 1.42
MEG3-204ENST00000398518 TRAPPC8Q9Y2L5 1435 aa23.91■■□□□ 1.42
MEG3-204ENST00000398518 EFCAB2Q5VUJ9 269 aa23.89■■□□□ 1.41
MEG3-204ENST00000398518 YEATS2Q9ULM3 1422 aa23.89■■□□□ 1.41
MEG3-204ENST00000398518 HECW2Q9P2P5 1572 aa23.88■■□□□ 1.41
MEG3-204ENST00000398518 KIDINS220Q9ULH0 1771 aa23.87■■□□□ 1.41
MEG3-204ENST00000398518 ABCA6Q8N139 1617 aa23.87■■□□□ 1.41
MEG3-204ENST00000398518 CAMSAP2Q08AD1 1489 aa23.87■■□□□ 1.41
MEG3-204ENST00000398518 ZNF644Q9H582 1327 aaPredicted RBP23.86■■□□□ 1.41
MEG3-204ENST00000398518 ZNF518AQ6AHZ1 1483 aa23.85■■□□□ 1.41
MEG3-204ENST00000398518 ZFYVE16Q7Z3T8 1539 aa23.85■■□□□ 1.41
MEG3-204ENST00000398518 INO80Q9ULG1 1556 aaPredicted RBP23.84■■□□□ 1.41
MEG3-204ENST00000398518 DIP2CQ9Y2E4 1556 aa23.83■■□□□ 1.41
MEG3-204ENST00000398518 MYOM3Q5VTT5 1437 aa23.82■■□□□ 1.4
MEG3-204ENST00000398518 MBD5Q9P267 1494 aa23.82■■□□□ 1.4
MEG3-204ENST00000398518 ZNF777Q9ULD5 760 aaPredicted RBP23.81■■□□□ 1.4
MEG3-204ENST00000398518 CFDP1Q9UEE9 299 aaPredicted RBP23.8■■□□□ 1.4
MEG3-204ENST00000398518 AFAP1Q8N556 730 aa23.79■■□□□ 1.4
MEG3-204ENST00000398518 PTPN23Q9H3S7 1636 aa23.78■■□□□ 1.4
MEG3-204ENST00000398518 KIAA1107Q9UPP5 1409 aa23.77■■□□□ 1.4
MEG3-204ENST00000398518 CROCC2H7BZ55 1655 aa23.76■■□□□ 1.39
MEG3-204ENST00000398518 MAGI2Q86UL8 1455 aa23.75■■□□□ 1.39
MEG3-204ENST00000398518 PLEKHH2Q8IVE3 1493 aa23.75■■□□□ 1.39
MEG3-204ENST00000398518 MLH3Q9UHC1 1453 aa23.75■■□□□ 1.39
MEG3-204ENST00000398518 ADGBQ8N7X0 1667 aa23.74■■□□□ 1.39
MEG3-204ENST00000398518 ARHGEF5Q12774 1597 aa23.74■■□□□ 1.39
MEG3-204ENST00000398518 HNRNPMP52272 730 aaKnown RBP eCLIP23.74■■□□□ 1.39
MEG3-204ENST00000398518 ATP7AQ04656 1500 aa23.74■■□□□ 1.39
MEG3-204ENST00000398518 APLP2Q06481 763 aa23.73■■□□□ 1.39
MEG3-204ENST00000398518 BCORL1Q5H9F3 1711 aa23.73■■□□□ 1.39
MEG3-204ENST00000398518 FGD6Q6ZV73 1430 aa23.72■■□□□ 1.39
MEG3-204ENST00000398518 PPARGC1BQ86YN6 1023 aaKnown RBP23.72■■□□□ 1.39
MEG3-204ENST00000398518 MIA2Q96PC5 1412 aa23.71■■□□□ 1.39
MEG3-204ENST00000398518 ADAMTSL3P82987 1691 aa23.69■■□□□ 1.38
MEG3-204ENST00000398518 TCOF1Q13428 1488 aaKnown RBP23.69■■□□□ 1.38
MEG3-204ENST00000398518 CCDC141Q6ZP82 1450 aa23.69■■□□□ 1.38
MEG3-204ENST00000398518 REREQ9P2R6 1566 aa23.69■■□□□ 1.38
MEG3-204ENST00000398518 KDM4FA0A1W2PPD8 638 aa23.67■■□□□ 1.38
MEG3-204ENST00000398518 DNMT1P26358 1616 aaKnown RBP23.67■■□□□ 1.38
MEG3-204ENST00000398518 PLXNC1O60486 1568 aa23.67■■□□□ 1.38
MEG3-204ENST00000398518 MADDQ8WXG6 1647 aa23.66■■□□□ 1.38
MEG3-204ENST00000398518 ATP10AO60312 1499 aa23.65■■□□□ 1.38
MEG3-204ENST00000398518 C9orf84Q5VXU9 1444 aa23.64■■□□□ 1.37
MEG3-204ENST00000398518 MAST1Q9Y2H9 1570 aa23.64■■□□□ 1.37
MEG3-204ENST00000398518 FER1L4A9Z1Z3 1794 aa23.59■■□□□ 1.37
MEG3-204ENST00000398518 RIMS1Q86UR5 1692 aaKnown RBP23.58■■□□□ 1.37
MEG3-204ENST00000398518 SPAG9O60271 1321 aaKnown RBP23.58■■□□□ 1.37
MEG3-204ENST00000398518 ABCC5O15440 1437 aa23.57■■□□□ 1.36
MEG3-204ENST00000398518 AGLP35573 1532 aa23.55■■□□□ 1.36
MEG3-204ENST00000398518 DAPK1P53355 1430 aa23.55■■□□□ 1.36
MEG3-204ENST00000398518 RTEL1-TNFRSF6BF6WH68 1400 aa23.54■■□□□ 1.36
MEG3-204ENST00000398518 SHANK2Q9UPX8 1470 aa23.53■■□□□ 1.36
MEG3-204ENST00000398518 A2MP01023 1474 aa23.52■■□□□ 1.36
MEG3-204ENST00000398518 MYT1LQ9UL68 1186 aa23.49■■□□□ 1.35
MEG3-204ENST00000398518 PTPRKQ15262 1439 aa23.49■■□□□ 1.35
MEG3-204ENST00000398518 ARID4BQ4LE39 1312 aaPredicted RBP23.47■■□□□ 1.35
MEG3-204ENST00000398518 MROH1Q8NDA8 1641 aa23.45■■□□□ 1.34
MEG3-204ENST00000398518 RRBP1Q9P2E9 1410 aaKnown RBP23.44■■□□□ 1.34
MEG3-204ENST00000398518 PTPRMP28827 1452 aa23.43■■□□□ 1.34
MEG3-204ENST00000398518 CLTCQ00610 1675 aaKnown RBP23.43■■□□□ 1.34
MEG3-204ENST00000398518 EIF2AK4Q9P2K8 1649 aaKnown RBP23.42■■□□□ 1.34
MEG3-204ENST00000398518 MLECQ14165 292 aa23.42■■□□□ 1.34
MEG3-204ENST00000398518 RNF17Q9BXT8 1623 aaKnown RBP23.42■■□□□ 1.34
MEG3-204ENST00000398518 C3P01024 1663 aa23.41■■□□□ 1.34
MEG3-204ENST00000398518 ADGRL2O95490 1459 aa23.41■■□□□ 1.34
MEG3-204ENST00000398518 FAM50AQ14320 339 aaKnown RBP23.41■■□□□ 1.34
MEG3-204ENST00000398518 RSPH4AQ5TD94 716 aa23.4■■□□□ 1.34
MEG3-204ENST00000398518 DHX29Q7Z478 1369 aaKnown RBP23.38■■□□□ 1.33
MEG3-204ENST00000398518 DUOX2Q9NRD8 1548 aa23.37■■□□□ 1.33
MEG3-204ENST00000398518 MROH2AA6NES4 1674 aa23.37■■□□□ 1.33
MEG3-204ENST00000398518 DEPDC5O75140 1603 aa23.36■■□□□ 1.33
MEG3-204ENST00000398518 KIF15Q9NS87 1388 aa23.35■■□□□ 1.33
MEG3-204ENST00000398518 CEP152O94986 1710 aa23.35■■□□□ 1.33
MEG3-204ENST00000398518 NCOA1Q15788 1441 aa23.35■■□□□ 1.33
MEG3-204ENST00000398518 TSPY4P0CV99 314 aa23.35■■□□□ 1.33
MEG3-204ENST00000398518 TSPY10P0CW01 314 aa23.35■■□□□ 1.33
MEG3-204ENST00000398518 CHIC2Q9UKJ5 165 aa23.34■■□□□ 1.33
MEG3-204ENST00000398518 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.33■■□□□ 1.32
MEG3-204ENST00000398518 PRDM15P57071 1507 aaPredicted RBP23.31■■□□□ 1.32
MEG3-204ENST00000398518 ERBINQ96RT1 1412 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms