RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 CARD11Q9BXL7 1154 aa14.45□□□□□ -0.1
RGPD2-201ENST00000398146 MARCH6O60337 910 aa14.45□□□□□ -0.1
RGPD2-201ENST00000398146 RASSF8Q8NHQ8 419 aa14.45□□□□□ -0.1
RGPD2-201ENST00000398146 PPP1R1BQ9UD71 204 aaPredicted RBP14.44□□□□□ -0.1
RGPD2-201ENST00000398146 RGS3P49796 1198 aa14.44□□□□□ -0.1
RGPD2-201ENST00000398146 CHAF1AQ13111 956 aaPredicted RBP14.44□□□□□ -0.1
RGPD2-201ENST00000398146 EVA1CP58658 441 aa14.43□□□□□ -0.1
RGPD2-201ENST00000398146 NRDCO43847 1150 aa14.43□□□□□ -0.1
RGPD2-201ENST00000398146 TOMM22Q9NS69 142 aa14.43□□□□□ -0.1
RGPD2-201ENST00000398146 SAMD1Q6SPF0 538 aaPredicted RBP14.43□□□□□ -0.1
RGPD2-201ENST00000398146 SCRIBQ14160 1630 aa14.42□□□□□ -0.1
RGPD2-201ENST00000398146 HSP90B1P14625 803 aaKnown RBP14.42□□□□□ -0.1
RGPD2-201ENST00000398146 NUTM2FA1L443 756 aa14.41□□□□□ -0.1
RGPD2-201ENST00000398146 LTV1Q96GA3 475 aaPredicted RBP14.41□□□□□ -0.1
RGPD2-201ENST00000398146 A0A0U1RQG5 324 aaPredicted RBP14.41□□□□□ -0.1
RGPD2-201ENST00000398146 TRIM34Q9BYJ4 488 aa14.41□□□□□ -0.1
RGPD2-201ENST00000398146 TCEAL9Q9UHQ7 104 aa14.41□□□□□ -0.1
RGPD2-201ENST00000398146 DDRGK1Q96HY6 314 aa14.39□□□□□ -0.11
RGPD2-201ENST00000398146 SPRYD3Q8NCJ5 442 aa14.39□□□□□ -0.11
RGPD2-201ENST00000398146 SYTL4Q96C24 671 aaPredicted RBP14.37□□□□□ -0.11
RGPD2-201ENST00000398146 KANK1Q14678 1352 aa14.36□□□□□ -0.11
RGPD2-201ENST00000398146 L1TD1Q5T7N2 865 aaKnown RBP14.36□□□□□ -0.11
RGPD2-201ENST00000398146 MCCP23508 829 aa14.35□□□□□ -0.11
RGPD2-201ENST00000398146 NUTM2DQ5VT03 806 aaPredicted RBP14.35□□□□□ -0.11
RGPD2-201ENST00000398146 CEP89Q96ST8 783 aa14.35□□□□□ -0.11
RGPD2-201ENST00000398146 KIAA1211Q6ZU35 1233 aa14.34□□□□□ -0.11
RGPD2-201ENST00000398146 MORC1Q86VD1 984 aa14.32□□□□□ -0.12
RGPD2-201ENST00000398146 EID1Q9Y6B2 187 aa14.32□□□□□ -0.12
RGPD2-201ENST00000398146 HDGFL2Q7Z4V5 671 aaPredicted RBP14.32□□□□□ -0.12
RGPD2-201ENST00000398146 NGDNQ8NEJ9 315 aaKnown RBP14.32□□□□□ -0.12
RGPD2-201ENST00000398146 CHMP4BQ9H444 224 aaKnown RBP14.32□□□□□ -0.12
RGPD2-201ENST00000398146 NAP1L5Q96NT1 182 aaPredicted RBP14.29□□□□□ -0.12
RGPD2-201ENST00000398146 NGEFQ8N5V2 710 aa14.27□□□□□ -0.12
RGPD2-201ENST00000398146 ACIN1Q9UKV3 1341 aaKnown RBP14.26□□□□□ -0.13
RGPD2-201ENST00000398146 PES1O00541 588 aaKnown RBP14.26□□□□□ -0.13
RGPD2-201ENST00000398146 SF3B2Q13435 895 aaKnown RBP14.25□□□□□ -0.13
RGPD2-201ENST00000398146 DCAF11Q8TEB1 546 aa14.25□□□□□ -0.13
RGPD2-201ENST00000398146 AMPHP49418 695 aa14.24□□□□□ -0.13
RGPD2-201ENST00000398146 NOL10Q9BSC4 688 aaKnown RBP14.24□□□□□ -0.13
RGPD2-201ENST00000398146 SLC4A10Q6U841 1118 aa14.24□□□□□ -0.13
RGPD2-201ENST00000398146 MS4A1P11836 297 aa14.22□□□□□ -0.13
RGPD2-201ENST00000398146 CCAR1Q8IX12 1150 aaKnown RBP14.22□□□□□ -0.13
RGPD2-201ENST00000398146 DHX16O60231 1041 aaKnown RBP14.22□□□□□ -0.13
RGPD2-201ENST00000398146 HSCBQ8IWL3 235 aa14.22□□□□□ -0.13
RGPD2-201ENST00000398146 EIF4G1Q04637 1599 aaKnown RBP14.22□□□□□ -0.13
RGPD2-201ENST00000398146 RSF1Q96T23 1441 aaPredicted RBP14.22□□□□□ -0.13
RGPD2-201ENST00000398146 TRIM6-TRIM34B2RNG4 842 aa14.22□□□□□ -0.13
RGPD2-201ENST00000398146 NOL8Q76FK4 1167 aaKnown RBP14.21□□□□□ -0.13
RGPD2-201ENST00000398146 B4GALNT3Q6L9W6 998 aa14.21□□□□□ -0.14
RGPD2-201ENST00000398146 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.21□□□□□ -0.14
RGPD2-201ENST00000398146 SPAG9O60271 1321 aaKnown RBP14.21□□□□□ -0.14
RGPD2-201ENST00000398146 TMF1P82094 1093 aa14.2□□□□□ -0.14
RGPD2-201ENST00000398146 GPATCH3Q96I76 525 aa14.2□□□□□ -0.14
RGPD2-201ENST00000398146 STK31Q9BXU1 1019 aa14.2□□□□□ -0.14
RGPD2-201ENST00000398146 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.18□□□□□ -0.14
RGPD2-201ENST00000398146 PAF1Q8N7H5 531 aa14.18□□□□□ -0.14
RGPD2-201ENST00000398146 ZCCHC6Q5VYS8 1495 aaKnown RBP14.18□□□□□ -0.14
RGPD2-201ENST00000398146 VPS37DQ86XT2 251 aa14.18□□□□□ -0.14
RGPD2-201ENST00000398146 AMOTL1Q8IY63 956 aa14.18□□□□□ -0.14
RGPD2-201ENST00000398146 ARID3AQ99856 593 aa14.18□□□□□ -0.14
RGPD2-201ENST00000398146 VSIG10Q8N0Z9 540 aa14.17□□□□□ -0.14
RGPD2-201ENST00000398146 SLC4A3P48751 1232 aa14.17□□□□□ -0.14
RGPD2-201ENST00000398146 RTN4Q9NQC3 1192 aaKnown RBP14.16□□□□□ -0.14
RGPD2-201ENST00000398146 ITPRIPQ8IWB1 547 aa14.16□□□□□ -0.14
RGPD2-201ENST00000398146 U2AF1L5P0DN76 240 aaPredicted RBP14.16□□□□□ -0.14
RGPD2-201ENST00000398146 U2AF1Q01081 240 aaKnown RBP eCLIP14.16□□□□□ -0.14
RGPD2-201ENST00000398146 CCDC43Q96MW1 224 aaKnown RBP14.16□□□□□ -0.14
RGPD2-201ENST00000398146 TPM4P67936 248 aa14.15□□□□□ -0.14
RGPD2-201ENST00000398146 PATL2C9JE40 543 aaKnown RBP14.13□□□□□ -0.15
RGPD2-201ENST00000398146 IBSPP21815 317 aaPredicted RBP14.13□□□□□ -0.15
RGPD2-201ENST00000398146 RBM33Q96EV2 1170 aaKnown RBP14.13□□□□□ -0.15
RGPD2-201ENST00000398146 TPD52L1Q16890 204 aaPredicted RBP14.13□□□□□ -0.15
RGPD2-201ENST00000398146 C1orf141Q5JVX7 400 aa14.12□□□□□ -0.15
RGPD2-201ENST00000398146 CCDC34Q96HJ3 373 aa14.12□□□□□ -0.15
RGPD2-201ENST00000398146 TMEM132AQ24JP5 1023 aa14.11□□□□□ -0.15
RGPD2-201ENST00000398146 CCNB3Q8WWL7 1395 aa14.11□□□□□ -0.15
RGPD2-201ENST00000398146 AKAP17AQ02040 695 aaKnown RBP14.11□□□□□ -0.15
RGPD2-201ENST00000398146 SUPT16HQ9Y5B9 1047 aaKnown RBP14.11□□□□□ -0.15
RGPD2-201ENST00000398146 WDR70Q9NW82 654 aa14.11□□□□□ -0.15
RGPD2-201ENST00000398146 PPM1FP49593 454 aaPredicted RBP14.11□□□□□ -0.15
RGPD2-201ENST00000398146 PAXIP1Q6ZW49 1069 aaPredicted RBP14.11□□□□□ -0.15
RGPD2-201ENST00000398146 HTATSF1O43719 755 aaKnown RBP14.1□□□□□ -0.15
RGPD2-201ENST00000398146 MSNP26038 577 aaKnown RBP14.1□□□□□ -0.15
RGPD2-201ENST00000398146 CFAP44Q96MT7 982 aa14.1□□□□□ -0.15
RGPD2-201ENST00000398146 FYB1O15117 783 aa14.09□□□□□ -0.15
RGPD2-201ENST00000398146 CYB5RLQ6IPT4 315 aa14.09□□□□□ -0.15
RGPD2-201ENST00000398146 FOXD1Q16676 465 aa14.09□□□□□ -0.15
RGPD2-201ENST00000398146 MTMR7Q9Y216 660 aa14.09□□□□□ -0.15
RGPD2-201ENST00000398146 NUTM2BA6NNL0 878 aaPredicted RBP14.09□□□□□ -0.15
RGPD2-201ENST00000398146 NUTM2EB1AL46 878 aaPredicted RBP14.09□□□□□ -0.15
RGPD2-201ENST00000398146 NUTM2AQ8IVF1 878 aaPredicted RBP14.09□□□□□ -0.15
RGPD2-201ENST00000398146 TTC5Q8N0Z6 440 aa14.08□□□□□ -0.15
RGPD2-201ENST00000398146 PIP4K2BP78356 416 aa14.07□□□□□ -0.16
RGPD2-201ENST00000398146 R3HCC1Q9Y3T6 440 aaKnown RBP14.07□□□□□ -0.16
RGPD2-201ENST00000398146 IPO8O15397 1037 aaKnown RBP14.06□□□□□ -0.16
RGPD2-201ENST00000398146 SF3A1Q15459 793 aaKnown RBP14.06□□□□□ -0.16
RGPD2-201ENST00000398146 APPP05067 770 aa14.06□□□□□ -0.16
RGPD2-201ENST00000398146 IKQ13123 557 aaPredicted RBP14.06□□□□□ -0.16
RGPD2-201ENST00000398146 TPM3P06753 285 aa14.06□□□□□ -0.16
RGPD2-201ENST00000398146 FOXD4L5Q5VV16 416 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 1039.8 ms