RNA–Protein interactions for RNA: ENST00000397838.7

CEP290-202, Transcript of centrosomal protein 290, humanhuman

TSL 5 BASIC

Gene CEP290, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-202ENST00000397838 ARID3AQ99856 593 aa11.07□□□□□ -0.64
CEP290-202ENST00000397838 MKRN3Q13064 507 aaKnown RBP11.06□□□□□ -0.64
CEP290-202ENST00000397838 FAM117AQ9C073 453 aa11.05□□□□□ -0.64
CEP290-202ENST00000397838 EMILIN3Q9NT22 766 aa11.04□□□□□ -0.64
CEP290-202ENST00000397838 TRPC6Q9Y210 931 aa11.04□□□□□ -0.64
CEP290-202ENST00000397838 DPYSL4O14531 572 aa11.03□□□□□ -0.64
CEP290-202ENST00000397838 GPR37O15354 613 aa11.03□□□□□ -0.64
CEP290-202ENST00000397838 ARID3CA6NKF2 412 aa11.01□□□□□ -0.65
CEP290-202ENST00000397838 HRCP23327 699 aa11.01□□□□□ -0.65
CEP290-202ENST00000397838 RSPH6AQ9H0K4 717 aa11.01□□□□□ -0.65
CEP290-202ENST00000397838 PPP1R15BQ5SWA1 713 aa10.99□□□□□ -0.65
CEP290-202ENST00000397838 PLEKHG3A1L390 1219 aa10.98□□□□□ -0.65
CEP290-202ENST00000397838 PHF12Q96QT6 1004 aa10.98□□□□□ -0.65
CEP290-202ENST00000397838 ZNF316A6NFI3 1004 aaPredicted RBP10.94□□□□□ -0.66
CEP290-202ENST00000397838 TMEM106CQ9BVX2 250 aa10.94□□□□□ -0.66
CEP290-202ENST00000397838 PAK3O75914 559 aaPredicted RBP10.93□□□□□ -0.66
CEP290-202ENST00000397838 DSG2Q14126 1118 aa10.93□□□□□ -0.66
CEP290-202ENST00000397838 PDIA6Q15084 440 aa10.93□□□□□ -0.66
CEP290-202ENST00000397838 GPHNQ9NQX3 736 aaPredicted RBP10.93□□□□□ -0.66
CEP290-202ENST00000397838 FXR2P51116 673 aaKnown RBP eCLIP10.93□□□□□ -0.66
CEP290-202ENST00000397838 CCDC102AQ96A19 550 aa10.9□□□□□ -0.66
CEP290-202ENST00000397838 FECHP22830 423 aa10.89□□□□□ -0.67
CEP290-202ENST00000397838 PARP9Q8IXQ6 854 aa10.89□□□□□ -0.67
CEP290-202ENST00000397838 GOLGA2Q08379 1002 aa10.88□□□□□ -0.67
CEP290-202ENST00000397838 ZRANB1Q9UGI0 708 aa10.88□□□□□ -0.67
CEP290-202ENST00000397838 DPY19L2Q6NUT2 758 aa10.88□□□□□ -0.67
CEP290-202ENST00000397838 APBB1O00213 710 aa10.87□□□□□ -0.67
CEP290-202ENST00000397838 GRXCR2A6NFK2 248 aa10.85□□□□□ -0.67
CEP290-202ENST00000397838 MS4A3Q96HJ5 214 aa10.85□□□□□ -0.67
CEP290-202ENST00000397838 ONECUT3O60422 494 aaPredicted RBP10.84□□□□□ -0.67
CEP290-202ENST00000397838 ILDR1Q86SU0 546 aaPredicted RBP10.84□□□□□ -0.67
CEP290-202ENST00000397838 NUTM2FA1L443 756 aa10.82□□□□□ -0.68
CEP290-202ENST00000397838 IRF6O14896 467 aa10.82□□□□□ -0.68
CEP290-202ENST00000397838 CLUAP1Q96AJ1 413 aa10.82□□□□□ -0.68
CEP290-202ENST00000397838 MAP2K5Q13163 448 aa10.82□□□□□ -0.68
CEP290-202ENST00000397838 CD44P16070 742 aaKnown RBP10.81□□□□□ -0.68
CEP290-202ENST00000397838 PIP4P2Q8N4L2 257 aa10.81□□□□□ -0.68
CEP290-202ENST00000397838 AMHR2Q16671 573 aa10.8□□□□□ -0.68
CEP290-202ENST00000397838 MINK1Q8N4C8 1332 aaPredicted RBP10.8□□□□□ -0.68
CEP290-202ENST00000397838 SPDYE16A6NNV3 312 aaPredicted RBP10.8□□□□□ -0.68
CEP290-202ENST00000397838 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.8□□□□□ -0.682e-7■■■■■ 29.3
CEP290-202ENST00000397838 PRIM1P49642 420 aaKnown RBP10.79□□□□□ -0.68
CEP290-202ENST00000397838 DDRGK1Q96HY6 314 aa10.79□□□□□ -0.68
CEP290-202ENST00000397838 OSBPP22059 807 aa10.78□□□□□ -0.68
CEP290-202ENST00000397838 REPIN1Q9BWE0 567 aaKnown RBP10.78□□□□□ -0.68
CEP290-202ENST00000397838 FOXK1P85037 733 aa10.77□□□□□ -0.68
CEP290-202ENST00000397838 MS4A1P11836 297 aa10.77□□□□□ -0.69
CEP290-202ENST00000397838 MICALL2Q8IY33 904 aa10.77□□□□□ -0.69
CEP290-202ENST00000397838 TTLL13PA6NNM8 815 aa10.76□□□□□ -0.69
CEP290-202ENST00000397838 CCDC82Q8N4S0 544 aa10.76□□□□□ -0.69
CEP290-202ENST00000397838 GNPATO15228 680 aa10.75□□□□□ -0.69
CEP290-202ENST00000397838 PLPP6Q8IY26 295 aa10.75□□□□□ -0.69
CEP290-202ENST00000397838 TTLL12Q14166 644 aaPredicted RBP10.74□□□□□ -0.69
CEP290-202ENST00000397838 NECTIN2Q92692 538 aa10.73□□□□□ -0.69
CEP290-202ENST00000397838 DDX12PQ92771 950 aa10.73□□□□□ -0.69
CEP290-202ENST00000397838 C2orf72A6NCS6 295 aa10.73□□□□□ -0.69
CEP290-202ENST00000397838 UPF1Q92900 1129 aaKnown RBP eCLIP10.73□□□□□ -0.69
CEP290-202ENST00000397838 GIGYF2Q6Y7W6 1299 aaKnown RBP10.7□□□□□ -0.7
CEP290-202ENST00000397838 TMC2Q8TDI7 906 aa10.7□□□□□ -0.7
CEP290-202ENST00000397838 BMP2KQ9NSY1 1161 aaPredicted RBP10.7□□□□□ -0.7
CEP290-202ENST00000397838 RANGAP1P46060 587 aaPredicted RBP10.7□□□□□ -0.7
CEP290-202ENST00000397838 FLIIQ13045 1269 aa10.7□□□□□ -0.7
CEP290-202ENST00000397838 NPM2Q86SE8 214 aaKnown RBP10.7□□□□□ -0.7
CEP290-202ENST00000397838 PDCD7Q8N8D1 485 aaKnown RBP10.7□□□□□ -0.7
CEP290-202ENST00000397838 TRIM35Q9UPQ4 493 aa10.69□□□□□ -0.7
CEP290-202ENST00000397838 KIF3CO14782 793 aa10.69□□□□□ -0.7
CEP290-202ENST00000397838 CHRDL2Q6WN34 429 aa10.69□□□□□ -0.7
CEP290-202ENST00000397838 HIC1Q14526 733 aa10.68□□□□□ -0.7
CEP290-202ENST00000397838 TRAK2O60296 914 aa10.67□□□□□ -0.7
CEP290-202ENST00000397838 MAP3K9P80192 1104 aa10.67□□□□□ -0.7
CEP290-202ENST00000397838 MCM6Q14566 821 aa10.67□□□□□ -0.7
CEP290-202ENST00000397838 POM121Q96HA1 1249 aa10.66□□□□□ -0.7
CEP290-202ENST00000397838 GOPCQ9HD26 462 aa10.65□□□□□ -0.7
CEP290-202ENST00000397838 PTGDRQ13258 359 aa10.65□□□□□ -0.71
CEP290-202ENST00000397838 FCHSD2O94868 740 aa10.64□□□□□ -0.71
CEP290-202ENST00000397838 TIE1P35590 1138 aa10.64□□□□□ -0.71
CEP290-202ENST00000397838 PHOX2BQ99453 314 aa10.64□□□□□ -0.71
CEP290-202ENST00000397838 TMEM92Q6UXU6 159 aa10.64□□□□□ -0.71
CEP290-202ENST00000397838 OXER1Q8TDS5 423 aa10.64□□□□□ -0.71
CEP290-202ENST00000397838 A6NJR5 290 aa10.63□□□□□ -0.71
CEP290-202ENST00000397838 CDHR5Q9HBB8 845 aa10.62□□□□□ -0.71
CEP290-202ENST00000397838 ZNF777Q9ULD5 760 aaPredicted RBP10.62□□□□□ -0.71
CEP290-202ENST00000397838 PDIA4P13667 645 aaKnown RBP10.61□□□□□ -0.71
CEP290-202ENST00000397838 TMEM121BQ9BXQ6 578 aaPredicted RBP10.6□□□□□ -0.71
CEP290-202ENST00000397838 GALR2O43603 387 aaPredicted RBP10.59□□□□□ -0.71
CEP290-202ENST00000397838 NLRP7Q8WX94 980 aa10.59□□□□□ -0.71
CEP290-202ENST00000397838 PCMTD1Q96MG8 357 aaPredicted RBP10.59□□□□□ -0.71
CEP290-202ENST00000397838 PTGER2P43116 358 aa10.58□□□□□ -0.72
CEP290-202ENST00000397838 PROCA1Q8NCQ7 364 aaPredicted RBP10.58□□□□□ -0.72
CEP290-202ENST00000397838 TMUB1Q9BVT8 246 aa10.57□□□□□ -0.72
CEP290-202ENST00000397838 NPDC1Q9NQX5 325 aaPredicted RBP10.56□□□□□ -0.72
CEP290-202ENST00000397838 BOLA1Q9Y3E2 137 aa10.56□□□□□ -0.72
CEP290-202ENST00000397838 MDM2Q00987 491 aaPredicted RBP10.56□□□□□ -0.72
CEP290-202ENST00000397838 FAM161AQ3B820 660 aa10.56□□□□□ -0.72
CEP290-202ENST00000397838 FNBP4Q8N3X1 1017 aaPredicted RBP10.56□□□□□ -0.72
CEP290-202ENST00000397838 SH3D19Q5HYK7 790 aa10.55□□□□□ -0.72
CEP290-202ENST00000397838 FBXO31Q5XUX0 539 aaPredicted RBP10.55□□□□□ -0.72
CEP290-202ENST00000397838 IRX5P78411 483 aaPredicted RBP10.54□□□□□ -0.72
CEP290-202ENST00000397838 PROSER2Q86WR7 435 aaPredicted RBP10.54□□□□□ -0.72
CEP290-202ENST00000397838 EVI5O60447 810 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 413.6 ms