RNA–Protein interactions for RNA: ENST00000397559.3

PDZD2-201, Transcript of PDZ domain containing 2, humanhuman

TSL 1 (best)

Gene PDZD2, Length 900 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD2-201ENST00000397559 TMEM92Q6UXU6 159 aa14.1□□□□□ -0.15
PDZD2-201ENST00000397559 PLCB2Q00722 1185 aa14.09□□□□□ -0.15
PDZD2-201ENST00000397559 TMC2Q8TDI7 906 aa14.04□□□□□ -0.16
PDZD2-201ENST00000397559 C2orf72A6NCS6 295 aa14.03□□□□□ -0.16
PDZD2-201ENST00000397559 CADPS2Q86UW7 1296 aa14.03□□□□□ -0.16
PDZD2-201ENST00000397559 KIF3CO14782 793 aa13.99□□□□□ -0.17
PDZD2-201ENST00000397559 TSHZ2Q9NRE2 1034 aa13.99□□□□□ -0.17
PDZD2-201ENST00000397559 PLSCR2Q9NRY7 297 aa13.98□□□□□ -0.17
PDZD2-201ENST00000397559 NCKAP5LQ9HCH0 1330 aa13.96□□□□□ -0.17
PDZD2-201ENST00000397559 CRISPLD2Q9H0B8 497 aa13.96□□□□□ -0.17
PDZD2-201ENST00000397559 GPHNQ9NQX3 736 aaPredicted RBP13.96□□□□□ -0.17
PDZD2-201ENST00000397559 PDE4AP27815 886 aa13.95□□□□□ -0.18
PDZD2-201ENST00000397559 HAP1P54257 671 aaPredicted RBP13.93□□□□□ -0.18
PDZD2-201ENST00000397559 LARP6Q9BRS8 491 aaKnown RBP13.93□□□□□ -0.18
PDZD2-201ENST00000397559 DSG2Q14126 1118 aa13.91□□□□□ -0.18
PDZD2-201ENST00000397559 SNPHO15079 494 aa13.9□□□□□ -0.18
PDZD2-201ENST00000397559 FOXK1P85037 733 aa13.89□□□□□ -0.19
PDZD2-201ENST00000397559 PLPP6Q8IY26 295 aa13.88□□□□□ -0.19
PDZD2-201ENST00000397559 PPP1R15BQ5SWA1 713 aa13.87□□□□□ -0.19
PDZD2-201ENST00000397559 DDX27Q96GQ7 796 aaKnown RBP13.87□□□□□ -0.19
PDZD2-201ENST00000397559 HOXB3P14651 431 aaPredicted RBP13.86□□□□□ -0.19
PDZD2-201ENST00000397559 FAM163AQ96GL9 167 aaPredicted RBP13.86□□□□□ -0.19
PDZD2-201ENST00000397559 DOK7Q18PE1 504 aa13.85□□□□□ -0.19
PDZD2-201ENST00000397559 MFSD10Q14728 455 aa13.83□□□□□ -0.2
PDZD2-201ENST00000397559 ZNF710Q8N1W2 664 aa13.81□□□□□ -0.2
PDZD2-201ENST00000397559 WDR70Q9NW82 654 aa13.79□□□□□ -0.2
PDZD2-201ENST00000397559 RIMBP2O15034 1052 aa13.78□□□□□ -0.2
PDZD2-201ENST00000397559 ST18O60284 1047 aa13.78□□□□□ -0.2
PDZD2-201ENST00000397559 LCE2DQ5TA82 110 aaPredicted RBP13.74□□□□□ -0.21
PDZD2-201ENST00000397559 SLC34A2O95436 690 aa13.73□□□□□ -0.21
PDZD2-201ENST00000397559 UPF1Q92900 1129 aaKnown RBP eCLIP13.73□□□□□ -0.21
PDZD2-201ENST00000397559 ARSIQ5FYB1 569 aa13.71□□□□□ -0.21
PDZD2-201ENST00000397559 ZSWIM6Q9HCJ5 1215 aa13.71□□□□□ -0.21
PDZD2-201ENST00000397559 PCDHGA4Q9Y5G9 962 aa13.7□□□□□ -0.22
PDZD2-201ENST00000397559 KHSRPQ92945 711 aaKnown RBP eCLIP13.69□□□□□ -0.22
PDZD2-201ENST00000397559 GPR153Q6NV75 609 aa13.68□□□□□ -0.22
PDZD2-201ENST00000397559 PTCD2Q8WV60 388 aaKnown RBP13.68□□□□□ -0.22
PDZD2-201ENST00000397559 HOXB1P14653 301 aaPredicted RBP13.67□□□□□ -0.22
PDZD2-201ENST00000397559 MARVELD3Q96A59 401 aa13.67□□□□□ -0.22
PDZD2-201ENST00000397559 EMILIN3Q9NT22 766 aa13.67□□□□□ -0.22
PDZD2-201ENST00000397559 CAMK2BQ13554 666 aa13.66□□□□□ -0.22
PDZD2-201ENST00000397559 E2F4Q16254 413 aa13.66□□□□□ -0.22
PDZD2-201ENST00000397559 OXER1Q8TDS5 423 aa13.66□□□□□ -0.22
PDZD2-201ENST00000397559 KDM2AQ9Y2K7 1162 aa13.66□□□□□ -0.22
PDZD2-201ENST00000397559 TBC1D12O60347 775 aa13.65□□□□□ -0.22
PDZD2-201ENST00000397559 VSIG10Q8N0Z9 540 aa13.64□□□□□ -0.23
PDZD2-201ENST00000397559 NUDT7P0C024 238 aa13.63□□□□□ -0.23
PDZD2-201ENST00000397559 EMP3P54852 163 aa13.62□□□□□ -0.23
PDZD2-201ENST00000397559 MAP3K9P80192 1104 aa13.62□□□□□ -0.23
PDZD2-201ENST00000397559 DPYSL4O14531 572 aa13.59□□□□□ -0.23
PDZD2-201ENST00000397559 POTEMA6NI47 508 aa13.56□□□□□ -0.24
PDZD2-201ENST00000397559 POTEGQ6S5H5 508 aa13.56□□□□□ -0.24
PDZD2-201ENST00000397559 FAM205CA6NFA0 338 aa13.55□□□□□ -0.24
PDZD2-201ENST00000397559 KCNV2Q8TDN2 545 aa13.55□□□□□ -0.24
PDZD2-201ENST00000397559 EVI5O60447 810 aa13.54□□□□□ -0.24
PDZD2-201ENST00000397559 ERBB3P21860 1342 aa13.54□□□□□ -0.24
PDZD2-201ENST00000397559 KDM4FA0A1W2PPD8 638 aa13.52□□□□□ -0.25
PDZD2-201ENST00000397559 LHX6Q9UPM6 363 aa13.52□□□□□ -0.25
PDZD2-201ENST00000397559 ZNF316A6NFI3 1004 aaPredicted RBP13.51□□□□□ -0.25
PDZD2-201ENST00000397559 P3H3Q8IVL6 736 aa13.51□□□□□ -0.25
PDZD2-201ENST00000397559 VARS2Q5ST30 1063 aaKnown RBP13.49□□□□□ -0.25
PDZD2-201ENST00000397559 HS3ST6Q96QI5 342 aa13.49□□□□□ -0.25
PDZD2-201ENST00000397559 ARIH1Q9Y4X5 557 aaPredicted RBP13.48□□□□□ -0.25
PDZD2-201ENST00000397559 ARHGEF1Q92888 912 aaKnown RBP13.47□□□□□ -0.25
PDZD2-201ENST00000397559 POTEB3A0JP26 581 aa13.46□□□□□ -0.25
PDZD2-201ENST00000397559 POTEBQ6S5H4 581 aa13.46□□□□□ -0.25
PDZD2-201ENST00000397559 ANO8Q9HCE9 1232 aaPredicted RBP13.45□□□□□ -0.26
PDZD2-201ENST00000397559 PDIA6Q15084 440 aa13.44□□□□□ -0.26
PDZD2-201ENST00000397559 SPDYE16A6NNV3 312 aaPredicted RBP13.43□□□□□ -0.26
PDZD2-201ENST00000397559 PSDA5PKW4 1024 aaPredicted RBP13.4□□□□□ -0.26
PDZD2-201ENST00000397559 ZNF454Q8N9F8 522 aa13.4□□□□□ -0.26
PDZD2-201ENST00000397559 PPP4R3BQ5MIZ7 849 aa13.38□□□□□ -0.27
PDZD2-201ENST00000397559 DDX12PQ92771 950 aa13.38□□□□□ -0.27
PDZD2-201ENST00000397559 FOSBP53539 338 aa13.36□□□□□ -0.27
PDZD2-201ENST00000397559 CDAN1Q8IWY9 1227 aa13.36□□□□□ -0.27
PDZD2-201ENST00000397559 JPH4Q96JJ6 628 aa13.36□□□□□ -0.27
PDZD2-201ENST00000397559 PTGER2P43116 358 aa13.34□□□□□ -0.27
PDZD2-201ENST00000397559 ZNF687Q8N1G0 1237 aa13.34□□□□□ -0.27
PDZD2-201ENST00000397559 GRXCR2A6NFK2 248 aa13.33□□□□□ -0.28
PDZD2-201ENST00000397559 PCDHGA10Q9Y5H3 936 aa13.33□□□□□ -0.28
PDZD2-201ENST00000397559 PHF14O94880 888 aa13.32□□□□□ -0.28
PDZD2-201ENST00000397559 SEMA3EO15041 775 aa13.3□□□□□ -0.28
PDZD2-201ENST00000397559 ZDHHC16Q969W1 377 aa13.3□□□□□ -0.28
PDZD2-201ENST00000397559 NBR1Q14596 966 aa13.29□□□□□ -0.28
PDZD2-201ENST00000397559 MLLT3P42568 568 aaPredicted RBP13.28□□□□□ -0.28
PDZD2-201ENST00000397559 TYW1BQ6NUM6 668 aa13.28□□□□□ -0.28
PDZD2-201ENST00000397559 EPAS1Q99814 870 aa13.28□□□□□ -0.28
PDZD2-201ENST00000397559 AXIN2Q9Y2T1 843 aa13.28□□□□□ -0.28
PDZD2-201ENST00000397559 ADAM33Q9BZ11 813 aa13.27□□□□□ -0.29
PDZD2-201ENST00000397559 POTEEQ6S8J3 1075 aa13.26□□□□□ -0.29
PDZD2-201ENST00000397559 FBXW7Q969H0 707 aa13.26□□□□□ -0.29
PDZD2-201ENST00000397559 RBM33Q96EV2 1170 aaKnown RBP13.26□□□□□ -0.29
PDZD2-201ENST00000397559 PCDH10Q9P2E7 1040 aa13.25□□□□□ -0.29
PDZD2-201ENST00000397559 KCNK17Q96T54 332 aa13.24□□□□□ -0.29
PDZD2-201ENST00000397559 KRTAP3-3Q9BYR6 98 aa13.24□□□□□ -0.29
PDZD2-201ENST00000397559 KRTAP3-2Q9BYR7 98 aa13.24□□□□□ -0.29
PDZD2-201ENST00000397559 BCL2L12Q9HB09 334 aa13.24□□□□□ -0.29
PDZD2-201ENST00000397559 ABCC9O60706 1549 aa13.23□□□□□ -0.29
PDZD2-201ENST00000397559 PBX2P40425 430 aa13.23□□□□□ -0.29
PDZD2-201ENST00000397559 PSEN2P49810 448 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms