RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 MYOM3Q5VTT5 1437 aa36.39■■■■□ 3.42
TSPAN4-203ENST00000397397 ARHGAP5Q13017 1502 aa36.36■■■■□ 3.41
TSPAN4-203ENST00000397397 ARAP3Q8WWN8 1544 aa36.35■■■■□ 3.41
TSPAN4-203ENST00000397397 CFDP1Q9UEE9 299 aaPredicted RBP36.34■■■■□ 3.41
TSPAN4-203ENST00000397397 TEX14Q8IWB6 1497 aa36.3■■■■□ 3.4
TSPAN4-203ENST00000397397 EFCAB2Q5VUJ9 269 aa36.29■■■■□ 3.4
TSPAN4-203ENST00000397397 FANCAO15360 1455 aa36.28■■■■□ 3.4
TSPAN4-203ENST00000397397 MIA2Q96PC5 1412 aa36.27■■■■□ 3.4
TSPAN4-203ENST00000397397 ZNF777Q9ULD5 760 aaPredicted RBP36.26■■■■□ 3.4
TSPAN4-203ENST00000397397 FGD6Q6ZV73 1430 aa36.26■■■■□ 3.39
TSPAN4-203ENST00000397397 CFAP74Q9C0B2 1584 aa36.25■■■■□ 3.39
TSPAN4-203ENST00000397397 COL17A1Q9UMD9 1497 aaPredicted RBP36.23■■■■□ 3.39
TSPAN4-203ENST00000397397 NEO1Q92859 1461 aa36.21■■■■□ 3.39
TSPAN4-203ENST00000397397 PTPN23Q9H3S7 1636 aa36.2■■■■□ 3.38
TSPAN4-203ENST00000397397 SAMD9LQ8IVG5 1584 aa36.19■■■■□ 3.38
TSPAN4-203ENST00000397397 ZNF644Q9H582 1327 aaPredicted RBP36.18■■■■□ 3.38
TSPAN4-203ENST00000397397 AKNAQ7Z591 1439 aa36.18■■■■□ 3.38
TSPAN4-203ENST00000397397 CAMSAP2Q08AD1 1489 aa36.16■■■■□ 3.38
TSPAN4-203ENST00000397397 RRBP1Q9P2E9 1410 aaKnown RBP36.12■■■■□ 3.37
TSPAN4-203ENST00000397397 TCOF1Q13428 1488 aaKnown RBP36.12■■■■□ 3.37
TSPAN4-203ENST00000397397 ADGRL1O94910 1474 aa36.11■■■■□ 3.37
TSPAN4-203ENST00000397397 PLEKHH2Q8IVE3 1493 aa36.11■■■■□ 3.37
TSPAN4-203ENST00000397397 FAM50AQ14320 339 aaKnown RBP36.1■■■■□ 3.37
TSPAN4-203ENST00000397397 ABCC1P33527 1531 aa36.1■■■■□ 3.37
TSPAN4-203ENST00000397397 SCAPERQ9BY12 1400 aa36.07■■■■□ 3.36
TSPAN4-203ENST00000397397 SYCP2Q9BX26 1530 aa36.06■■■■□ 3.36
TSPAN4-203ENST00000397397 KIAA1107Q9UPP5 1409 aa36.05■■■■□ 3.36
TSPAN4-203ENST00000397397 HNRNPMP52272 730 aaKnown RBP eCLIP36.04■■■■□ 3.36
TSPAN4-203ENST00000397397 ARHGEF12Q9NZN5 1544 aa36.03■■■■□ 3.36
TSPAN4-203ENST00000397397 DENND4BO75064 1496 aaPredicted RBP35.99■■■■□ 3.35
TSPAN4-203ENST00000397397 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.98■■■■□ 3.351e-6■■■■■ 46.2
TSPAN4-203ENST00000397397 MBD5Q9P267 1494 aa35.98■■■■□ 3.35
TSPAN4-203ENST00000397397 ARHGEF5Q12774 1597 aa35.95■■■■□ 3.35
TSPAN4-203ENST00000397397 TRAPPC8Q9Y2L5 1435 aa35.95■■■■□ 3.35
TSPAN4-203ENST00000397397 POGZQ7Z3K3 1410 aa35.93■■■■□ 3.34
TSPAN4-203ENST00000397397 DNMT1P26358 1616 aaKnown RBP35.92■■■■□ 3.34
TSPAN4-203ENST00000397397 RAPGEF3O95398 923 aa35.91■■■■□ 3.34
TSPAN4-203ENST00000397397 RSPH4AQ5TD94 716 aa35.91■■■■□ 3.34
TSPAN4-203ENST00000397397 RICTORQ6R327 1708 aa35.91■■■■□ 3.34
TSPAN4-203ENST00000397397 CCDC141Q6ZP82 1450 aa35.91■■■■□ 3.34
TSPAN4-203ENST00000397397 AFAP1Q8N556 730 aa35.9■■■■□ 3.34
TSPAN4-203ENST00000397397 ZNF518AQ6AHZ1 1483 aa35.89■■■■□ 3.34
TSPAN4-203ENST00000397397 DAPK1P53355 1430 aa35.88■■■■□ 3.33
TSPAN4-203ENST00000397397 ABCC5O15440 1437 aa35.87■■■■□ 3.33
TSPAN4-203ENST00000397397 FRMPD1Q5SYB0 1578 aa35.87■■■■□ 3.33
TSPAN4-203ENST00000397397 ITGAEP38570 1179 aa35.86■■■■□ 3.33
TSPAN4-203ENST00000397397 CROCC2H7BZ55 1655 aa35.84■■■■□ 3.33
TSPAN4-203ENST00000397397 KDM5CP41229 1560 aa35.82■■■■□ 3.32
TSPAN4-203ENST00000397397 TSPY4P0CV99 314 aa35.82■■■■□ 3.32
TSPAN4-203ENST00000397397 TSPY10P0CW01 314 aa35.82■■■■□ 3.32
TSPAN4-203ENST00000397397 SPAG9O60271 1321 aaKnown RBP35.79■■■■□ 3.32
TSPAN4-203ENST00000397397 TRIM26Q12899 539 aaPredicted RBP35.79■■■■□ 3.32
TSPAN4-203ENST00000397397 SHANK2Q9UPX8 1470 aa35.77■■■■□ 3.32
TSPAN4-203ENST00000397397 MYT1LQ9UL68 1186 aa35.76■■■■□ 3.32
TSPAN4-203ENST00000397397 C9orf84Q5VXU9 1444 aa35.76■■■■□ 3.32
TSPAN4-203ENST00000397397 ZMYM4Q5VZL5 1548 aa35.76■■■■□ 3.31
TSPAN4-203ENST00000397397 PTPRKQ15262 1439 aa35.75■■■■□ 3.31
TSPAN4-203ENST00000397397 HECW2Q9P2P5 1572 aa35.74■■■■□ 3.31
TSPAN4-203ENST00000397397 CHIC2Q9UKJ5 165 aa35.74■■■■□ 3.31
TSPAN4-203ENST00000397397 MAST1Q9Y2H9 1570 aa35.74■■■■□ 3.31
TSPAN4-203ENST00000397397 AEBP2Q6ZN18 517 aaPredicted RBP35.74■■■■□ 3.31
TSPAN4-203ENST00000397397 KDM4FA0A1W2PPD8 638 aa35.73■■■■□ 3.31
TSPAN4-203ENST00000397397 MLH3Q9UHC1 1453 aa35.72■■■■□ 3.31
TSPAN4-203ENST00000397397 INO80Q9ULG1 1556 aaPredicted RBP35.72■■■■□ 3.31
TSPAN4-203ENST00000397397 ATP7AQ04656 1500 aa35.71■■■■□ 3.31
TSPAN4-203ENST00000397397 ZFYVE16Q7Z3T8 1539 aa35.7■■■■□ 3.31
TSPAN4-203ENST00000397397 RTEL1-TNFRSF6BF6WH68 1400 aa35.7■■■■□ 3.3
TSPAN4-203ENST00000397397 KIDINS220Q9ULH0 1771 aa35.69■■■■□ 3.3
TSPAN4-203ENST00000397397 ADGBQ8N7X0 1667 aa35.68■■■■□ 3.3
TSPAN4-203ENST00000397397 MAGI2Q86UL8 1455 aa35.67■■■■□ 3.3
TSPAN4-203ENST00000397397 ADGRL2O95490 1459 aa35.63■■■■□ 3.29
TSPAN4-203ENST00000397397 ANKRD30AQ9BXX3 1397 aa35.63■■■■□ 3.29
TSPAN4-203ENST00000397397 YEATS2Q9ULM3 1422 aa35.62■■■■□ 3.29
TSPAN4-203ENST00000397397 PLXNC1O60486 1568 aa35.6■■■■□ 3.29
TSPAN4-203ENST00000397397 ROCK1Q13464 1354 aa35.59■■■■□ 3.29
TSPAN4-203ENST00000397397 ABCA6Q8N139 1617 aa35.59■■■■□ 3.29
TSPAN4-203ENST00000397397 NCOA1Q15788 1441 aa35.58■■■■□ 3.29
TSPAN4-203ENST00000397397 RRP7BPQ9NSQ0 103 aa35.57■■■■□ 3.29
TSPAN4-203ENST00000397397 DIP2CQ9Y2E4 1556 aa35.57■■■■□ 3.28
TSPAN4-203ENST00000397397 ARHGEF40Q8TER5 1519 aa35.56■■■■□ 3.28
TSPAN4-203ENST00000397397 KIF15Q9NS87 1388 aa35.53■■■■□ 3.28
TSPAN4-203ENST00000397397 ATP10AO60312 1499 aa35.5■■■■□ 3.27
TSPAN4-203ENST00000397397 DUOX2Q9NRD8 1548 aa35.47■■■■□ 3.27
TSPAN4-203ENST00000397397 A2MP01023 1474 aa35.47■■■■□ 3.27
TSPAN4-203ENST00000397397 PCGF6Q9BYE7 350 aa35.46■■■■□ 3.27
TSPAN4-203ENST00000397397 HFM1A2PYH4 1435 aa35.44■■■■□ 3.26
TSPAN4-203ENST00000397397 GCC2Q8IWJ2 1684 aa35.44■■■■□ 3.26
TSPAN4-203ENST00000397397 DHX29Q7Z478 1369 aaKnown RBP35.44■■■■□ 3.26
TSPAN4-203ENST00000397397 NAIPQ13075 1403 aa35.43■■■■□ 3.26
TSPAN4-203ENST00000397397 REREQ9P2R6 1566 aa35.4■■■■□ 3.26
TSPAN4-203ENST00000397397 ANKRD50Q9ULJ7 1429 aa35.38■■■■□ 3.25
TSPAN4-203ENST00000397397 ERBINQ96RT1 1412 aa35.36■■■■□ 3.25
TSPAN4-203ENST00000397397 SETD5Q9C0A6 1442 aa35.34■■■■□ 3.25
TSPAN4-203ENST00000397397 SIGLEC1Q9BZZ2 1709 aa35.33■■■■□ 3.25
TSPAN4-203ENST00000397397 EIF2AK4Q9P2K8 1649 aaKnown RBP35.31■■■■□ 3.24
TSPAN4-203ENST00000397397 ARID4BQ4LE39 1312 aaPredicted RBP35.3■■■■□ 3.24
TSPAN4-203ENST00000397397 AGLP35573 1532 aa35.29■■■■□ 3.24
TSPAN4-203ENST00000397397 KIF3BO15066 747 aa35.29■■■■□ 3.24
TSPAN4-203ENST00000397397 BCORL1Q5H9F3 1711 aa35.28■■■■□ 3.24
TSPAN4-203ENST00000397397 ADAMTSL3P82987 1691 aa35.27■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms