RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 TSHZ2Q9NRE2 1034 aa10.7□□□□□ -0.7
CMC1-202ENST00000396610 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.67□□□□□ -0.7
CMC1-202ENST00000396610 SNPHO15079 494 aa10.64□□□□□ -0.71
CMC1-202ENST00000396610 L3MBTL3Q96JM7 780 aaPredicted RBP10.63□□□□□ -0.71
CMC1-202ENST00000396610 CADPS2Q86UW7 1296 aa10.62□□□□□ -0.71
CMC1-202ENST00000396610 MICALL2Q8IY33 904 aa10.62□□□□□ -0.71
CMC1-202ENST00000396610 ST18O60284 1047 aa10.61□□□□□ -0.71
CMC1-202ENST00000396610 BOLA1Q9Y3E2 137 aa10.61□□□□□ -0.71
CMC1-202ENST00000396610 C3orf67Q6ZVT6 689 aa10.59□□□□□ -0.71
CMC1-202ENST00000396610 TMEM121BQ9BXQ6 578 aaPredicted RBP10.59□□□□□ -0.71
CMC1-202ENST00000396610 CDAN1Q8IWY9 1227 aa10.58□□□□□ -0.72
CMC1-202ENST00000396610 G3V3G9 751 aa10.57□□□□□ -0.72
CMC1-202ENST00000396610 KDM2AQ9Y2K7 1162 aa10.54□□□□□ -0.72
CMC1-202ENST00000396610 VSIG10Q8N0Z9 540 aa10.52□□□□□ -0.73
CMC1-202ENST00000396610 NCKAP5LQ9HCH0 1330 aa10.52□□□□□ -0.73
CMC1-202ENST00000396610 CRISPLD2Q9H0B8 497 aa10.49□□□□□ -0.73
CMC1-202ENST00000396610 TMEM92Q6UXU6 159 aa10.48□□□□□ -0.73
CMC1-202ENST00000396610 TMC2Q8TDI7 906 aa10.44□□□□□ -0.74
CMC1-202ENST00000396610 LARP6Q9BRS8 491 aaKnown RBP10.44□□□□□ -0.74
CMC1-202ENST00000396610 C2orf72A6NCS6 295 aa10.43□□□□□ -0.74
CMC1-202ENST00000396610 PDE4AP27815 886 aa10.43□□□□□ -0.74
CMC1-202ENST00000396610 GPHNQ9NQX3 736 aaPredicted RBP10.43□□□□□ -0.74
CMC1-202ENST00000396610 KIF3CO14782 793 aa10.42□□□□□ -0.74
CMC1-202ENST00000396610 MFSD10Q14728 455 aa10.42□□□□□ -0.74
CMC1-202ENST00000396610 MARVELD3Q96A59 401 aa10.41□□□□□ -0.74
CMC1-202ENST00000396610 DDX27Q96GQ7 796 aaKnown RBP10.41□□□□□ -0.74
CMC1-202ENST00000396610 EMP3P54852 163 aa10.39□□□□□ -0.75
CMC1-202ENST00000396610 DSG2Q14126 1118 aa10.39□□□□□ -0.75
CMC1-202ENST00000396610 PPP1R15BQ5SWA1 713 aa10.39□□□□□ -0.75
CMC1-202ENST00000396610 WDR70Q9NW82 654 aa10.39□□□□□ -0.75
CMC1-202ENST00000396610 FOXK1P85037 733 aa10.36□□□□□ -0.75
CMC1-202ENST00000396610 PLPP6Q8IY26 295 aa10.34□□□□□ -0.75
CMC1-202ENST00000396610 KCNV2Q8TDN2 545 aa10.33□□□□□ -0.76
CMC1-202ENST00000396610 SPNS2Q8IVW8 549 aa10.32□□□□□ -0.76
CMC1-202ENST00000396610 E2F4Q16254 413 aa10.31□□□□□ -0.76
CMC1-202ENST00000396610 ZNF710Q8N1W2 664 aa10.31□□□□□ -0.76
CMC1-202ENST00000396610 FAM205CA6NFA0 338 aa10.3□□□□□ -0.76
CMC1-202ENST00000396610 CAMK2BQ13554 666 aa10.3□□□□□ -0.76
CMC1-202ENST00000396610 DOK7Q18PE1 504 aa10.3□□□□□ -0.76
CMC1-202ENST00000396610 HS3ST6Q96QI5 342 aa10.3□□□□□ -0.76
CMC1-202ENST00000396610 MMRN1Q13201 1228 aa10.29□□□□□ -0.76
CMC1-202ENST00000396610 P3H3Q8IVL6 736 aa10.29□□□□□ -0.76
CMC1-202ENST00000396610 RIMBP2O15034 1052 aa10.28□□□□□ -0.76
CMC1-202ENST00000396610 HOXB3P14651 431 aaPredicted RBP10.28□□□□□ -0.76
CMC1-202ENST00000396610 EMILIN3Q9NT22 766 aa10.27□□□□□ -0.77
CMC1-202ENST00000396610 HOXB1P14653 301 aaPredicted RBP10.26□□□□□ -0.77
CMC1-202ENST00000396610 UPF1Q92900 1129 aaKnown RBP eCLIP10.25□□□□□ -0.77
CMC1-202ENST00000396610 DPYSL4O14531 572 aa10.22□□□□□ -0.77
CMC1-202ENST00000396610 POTEB3A0JP26 581 aa10.21□□□□□ -0.77
CMC1-202ENST00000396610 POTEBQ6S5H4 581 aa10.21□□□□□ -0.77
CMC1-202ENST00000396610 OXER1Q8TDS5 423 aa10.21□□□□□ -0.77
CMC1-202ENST00000396610 KRTAP3-3Q9BYR6 98 aa10.21□□□□□ -0.77
CMC1-202ENST00000396610 KRTAP3-2Q9BYR7 98 aa10.21□□□□□ -0.77
CMC1-202ENST00000396610 ARHGEF1Q92888 912 aaKnown RBP10.2□□□□□ -0.78
CMC1-202ENST00000396610 ZSWIM6Q9HCJ5 1215 aa10.2□□□□□ -0.78
CMC1-202ENST00000396610 ERBB3P21860 1342 aa10.19□□□□□ -0.78
CMC1-202ENST00000396610 SLC34A2O95436 690 aa10.19□□□□□ -0.78
CMC1-202ENST00000396610 ARIH1Q9Y4X5 557 aaPredicted RBP10.19□□□□□ -0.78
CMC1-202ENST00000396610 PTCD2Q8WV60 388 aaKnown RBP10.17□□□□□ -0.78
CMC1-202ENST00000396610 NBR1Q14596 966 aa10.16□□□□□ -0.78
CMC1-202ENST00000396610 PCDHGA4Q9Y5G9 962 aa10.16□□□□□ -0.78
CMC1-202ENST00000396610 MAP3K9P80192 1104 aa10.14□□□□□ -0.79
CMC1-202ENST00000396610 PDIA6Q15084 440 aa10.14□□□□□ -0.79
CMC1-202ENST00000396610 BCANQ96GW7 911 aa10.14□□□□□ -0.79
CMC1-202ENST00000396610 KHSRPQ92945 711 aaKnown RBP eCLIP10.12□□□□□ -0.795e-7■■■□□ 16.6
CMC1-202ENST00000396610 ARSIQ5FYB1 569 aa10.11□□□□□ -0.79
CMC1-202ENST00000396610 VARS2Q5ST30 1063 aaKnown RBP10.11□□□□□ -0.79
CMC1-202ENST00000396610 SEMA3EO15041 775 aa10.1□□□□□ -0.79
CMC1-202ENST00000396610 TBC1D12O60347 775 aa10.1□□□□□ -0.79
CMC1-202ENST00000396610 EVI5O60447 810 aa10.09□□□□□ -0.79
CMC1-202ENST00000396610 GPR153Q6NV75 609 aa10.09□□□□□ -0.79
CMC1-202ENST00000396610 ZNF316A6NFI3 1004 aaPredicted RBP10.08□□□□□ -0.8
CMC1-202ENST00000396610 SPDYE16A6NNV3 312 aaPredicted RBP10.08□□□□□ -0.8
CMC1-202ENST00000396610 NUDT7P0C024 238 aa10.08□□□□□ -0.8
CMC1-202ENST00000396610 KDM4FA0A1W2PPD8 638 aa10.06□□□□□ -0.8
CMC1-202ENST00000396610 ZNF687Q8N1G0 1237 aa10.06□□□□□ -0.8
CMC1-202ENST00000396610 TESPA1A2RU30 521 aaPredicted RBP10.05□□□□□ -0.8
CMC1-202ENST00000396610 MLLT3P42568 568 aaPredicted RBP10.05□□□□□ -0.8
CMC1-202ENST00000396610 DDX12PQ92771 950 aa10.03□□□□□ -0.8
CMC1-202ENST00000396610 ANO8Q9HCE9 1232 aaPredicted RBP10.01□□□□□ -0.81
CMC1-202ENST00000396610 GRXCR2A6NFK2 248 aa10□□□□□ -0.81
CMC1-202ENST00000396610 PTGER2P43116 358 aa9.99□□□□□ -0.81
CMC1-202ENST00000396610 RNF166Q96A37 237 aaPredicted RBP9.99□□□□□ -0.81
CMC1-202ENST00000396610 LHX6Q9UPM6 363 aa9.99□□□□□ -0.81
CMC1-202ENST00000396610 JPH4Q96JJ6 628 aa9.97□□□□□ -0.81
CMC1-202ENST00000396610 MYT1LQ9UL68 1186 aa9.97□□□□□ -0.81
CMC1-202ENST00000396610 PRIM1P49642 420 aaKnown RBP9.95□□□□□ -0.82
CMC1-202ENST00000396610 FOSBP53539 338 aa9.95□□□□□ -0.82
CMC1-202ENST00000396610 ZNF454Q8N9F8 522 aa9.95□□□□□ -0.82
CMC1-202ENST00000396610 PCDHGA10Q9Y5H3 936 aa9.95□□□□□ -0.82
CMC1-202ENST00000396610 PHF14O94880 888 aa9.94□□□□□ -0.82
CMC1-202ENST00000396610 TULP1O00294 542 aaPredicted RBP9.93□□□□□ -0.82
CMC1-202ENST00000396610 OSBPP22059 807 aa9.93□□□□□ -0.82
CMC1-202ENST00000396610 SMYD5Q6GMV2 418 aa9.93□□□□□ -0.82
CMC1-202ENST00000396610 LMOD2Q6P5Q4 547 aa9.93□□□□□ -0.82
CMC1-202ENST00000396610 RBM26Q5T8P6 1007 aaKnown RBP9.92□□□□□ -0.82
CMC1-202ENST00000396610 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.92□□□□□ -0.82
CMC1-202ENST00000396610 PBX2P40425 430 aa9.91□□□□□ -0.82
CMC1-202ENST00000396610 TYW1BQ6NUM6 668 aa9.91□□□□□ -0.82
CMC1-202ENST00000396610 EN1Q05925 392 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms