RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 HS3ST6Q96QI5 342 aa10.34□□□□□ -0.75
GABPB1-204ENST00000396464 HOXB1P14653 301 aaPredicted RBP10.32□□□□□ -0.76
GABPB1-204ENST00000396464 FBXO22Q8NEZ5 403 aa10.31□□□□□ -0.76
GABPB1-204ENST00000396464 ERBB3P21860 1342 aa10.31□□□□□ -0.76
GABPB1-204ENST00000396464 TMEM92Q6UXU6 159 aa10.3□□□□□ -0.76
GABPB1-204ENST00000396464 MFRPQ9BY79 579 aa10.3□□□□□ -0.76
GABPB1-204ENST00000396464 ZSWIM6Q9HCJ5 1215 aa10.27□□□□□ -0.77
GABPB1-204ENST00000396464 SPNS2Q8IVW8 549 aa10.26□□□□□ -0.77
GABPB1-204ENST00000396464 POTEB3A0JP26 581 aa10.24□□□□□ -0.77
GABPB1-204ENST00000396464 POTEBQ6S5H4 581 aa10.24□□□□□ -0.77
GABPB1-204ENST00000396464 MMRN1Q13201 1228 aa10.23□□□□□ -0.77
GABPB1-204ENST00000396464 VARS2Q5ST30 1063 aaKnown RBP10.22□□□□□ -0.77
GABPB1-204ENST00000396464 TMC2Q8TDI7 906 aa10.21□□□□□ -0.78
GABPB1-204ENST00000396464 ARSIQ5FYB1 569 aa10.18□□□□□ -0.78
GABPB1-204ENST00000396464 KRTAP3-3Q9BYR6 98 aa10.18□□□□□ -0.78
GABPB1-204ENST00000396464 KRTAP3-2Q9BYR7 98 aa10.18□□□□□ -0.78
GABPB1-204ENST00000396464 C2orf72A6NCS6 295 aa10.17□□□□□ -0.78
GABPB1-204ENST00000396464 GPR153Q6NV75 609 aa10.17□□□□□ -0.78
GABPB1-204ENST00000396464 CHGAP10645 457 aaKnown RBP10.16□□□□□ -0.78
GABPB1-204ENST00000396464 HS6ST3Q8IZP7 471 aa10.16□□□□□ -0.78
GABPB1-204ENST00000396464 KIF3CO14782 793 aa10.12□□□□□ -0.79
GABPB1-204ENST00000396464 PPP1R37O75864 691 aa10.11□□□□□ -0.79
GABPB1-204ENST00000396464 ZNF687Q8N1G0 1237 aa10.11□□□□□ -0.79
GABPB1-204ENST00000396464 KHSRPQ92945 711 aaKnown RBP eCLIP10.1□□□□□ -0.792e-9■□□□□ 9.6
GABPB1-204ENST00000396464 ZNF316A6NFI3 1004 aaPredicted RBP10.09□□□□□ -0.79
GABPB1-204ENST00000396464 RYDENQ9NUL5 291 aaKnown RBP10.08□□□□□ -0.8
GABPB1-204ENST00000396464 NUDT7P0C024 238 aa10.07□□□□□ -0.8
GABPB1-204ENST00000396464 PCDHGA4Q9Y5G9 962 aa10.07□□□□□ -0.8
GABPB1-204ENST00000396464 SLC34A2O95436 690 aa10.05□□□□□ -0.8
GABPB1-204ENST00000396464 DCAF8L2P0C7V8 631 aa10.04□□□□□ -0.8
GABPB1-204ENST00000396464 ANKRD13DQ6ZTN6 518 aa10.03□□□□□ -0.8
GABPB1-204ENST00000396464 RNF166Q96A37 237 aaPredicted RBP10.01□□□□□ -0.81
GABPB1-204ENST00000396464 MYT1LQ9UL68 1186 aa10.01□□□□□ -0.81
GABPB1-204ENST00000396464 LHX6Q9UPM6 363 aa10□□□□□ -0.81
GABPB1-204ENST00000396464 PTGER2P43116 358 aa9.99□□□□□ -0.81
GABPB1-204ENST00000396464 PLPP6Q8IY26 295 aa9.99□□□□□ -0.81
GABPB1-204ENST00000396464 GPHNQ9NQX3 736 aaPredicted RBP9.99□□□□□ -0.81
GABPB1-204ENST00000396464 TBC1D12O60347 775 aa9.99□□□□□ -0.81
GABPB1-204ENST00000396464 FOXK1P85037 733 aa9.99□□□□□ -0.81
GABPB1-204ENST00000396464 PSDA5PKW4 1024 aaPredicted RBP9.98□□□□□ -0.81
GABPB1-204ENST00000396464 PBX2P40425 430 aa9.98□□□□□ -0.81
GABPB1-204ENST00000396464 LSM11P83369 360 aaKnown RBP eCLIP9.96□□□□□ -0.82
GABPB1-204ENST00000396464 NKX1-1Q15270 411 aaPredicted RBP9.96□□□□□ -0.82
GABPB1-204ENST00000396464 DNAJC5Q9H3Z4 198 aa9.96□□□□□ -0.82
GABPB1-204ENST00000396464 PTCD2Q8WV60 388 aaKnown RBP9.95□□□□□ -0.82
GABPB1-204ENST00000396464 DSG2Q14126 1118 aa9.94□□□□□ -0.82
GABPB1-204ENST00000396464 AXIN2Q9Y2T1 843 aa9.91□□□□□ -0.82
GABPB1-204ENST00000396464 ARHGAP33O14559 1287 aa9.89□□□□□ -0.83
GABPB1-204ENST00000396464 PPP4R3BQ5MIZ7 849 aa9.89□□□□□ -0.83
GABPB1-204ENST00000396464 KCNH8Q96L42 1107 aa9.89□□□□□ -0.83
GABPB1-204ENST00000396464 PDE4AP27815 886 aa9.88□□□□□ -0.83
GABPB1-204ENST00000396464 UPF1Q92900 1129 aaKnown RBP eCLIP9.88□□□□□ -0.83
GABPB1-204ENST00000396464 PPP1R15BQ5SWA1 713 aa9.87□□□□□ -0.83
GABPB1-204ENST00000396464 CRISPLD2Q9H0B8 497 aa9.85□□□□□ -0.83
GABPB1-204ENST00000396464 STAC3Q96MF2 364 aa9.84□□□□□ -0.83
GABPB1-204ENST00000396464 GTPBP6O43824 516 aaPredicted RBP9.83□□□□□ -0.84
GABPB1-204ENST00000396464 PRKCSHP14314 528 aaPredicted RBP9.83□□□□□ -0.84
GABPB1-204ENST00000396464 KDM4FA0A1W2PPD8 638 aa9.82□□□□□ -0.84
GABPB1-204ENST00000396464 ADGRD1Q6QNK2 874 aa9.82□□□□□ -0.84
GABPB1-204ENST00000396464 POTEEQ6S8J3 1075 aa9.82□□□□□ -0.84
GABPB1-204ENST00000396464 OXER1Q8TDS5 423 aa9.82□□□□□ -0.84
GABPB1-204ENST00000396464 LARP6Q9BRS8 491 aaKnown RBP9.82□□□□□ -0.84
GABPB1-204ENST00000396464 PSEN2P49810 448 aa9.8□□□□□ -0.84
GABPB1-204ENST00000396464 DDX27Q96GQ7 796 aaKnown RBP9.8□□□□□ -0.84
GABPB1-204ENST00000396464 NCKAP5LQ9HCH0 1330 aa9.79□□□□□ -0.84
GABPB1-204ENST00000396464 ZNF454Q8N9F8 522 aa9.79□□□□□ -0.84
GABPB1-204ENST00000396464 KCNK17Q96T54 332 aa9.79□□□□□ -0.84
GABPB1-204ENST00000396464 TK2O00142 265 aa9.78□□□□□ -0.84
GABPB1-204ENST00000396464 DAXXQ9UER7 740 aaPredicted RBP9.78□□□□□ -0.84
GABPB1-204ENST00000396464 DMRTA1Q5VZB9 504 aa9.76□□□□□ -0.85
GABPB1-204ENST00000396464 MAP3K9P80192 1104 aa9.75□□□□□ -0.85
GABPB1-204ENST00000396464 HCSTQ9UBK5 93 aa9.74□□□□□ -0.85
GABPB1-204ENST00000396464 EVI5O60447 810 aa9.73□□□□□ -0.85
GABPB1-204ENST00000396464 PTPREP23469 700 aa9.71□□□□□ -0.86
GABPB1-204ENST00000396464 BCL2L12Q9HB09 334 aa9.7□□□□□ -0.86
GABPB1-204ENST00000396464 FOSBP53539 338 aa9.69□□□□□ -0.86
GABPB1-204ENST00000396464 MFSD10Q14728 455 aa9.69□□□□□ -0.86
GABPB1-204ENST00000396464 KCTD12Q96CX2 325 aaKnown RBP9.69□□□□□ -0.86
GABPB1-204ENST00000396464 JPH4Q96JJ6 628 aa9.69□□□□□ -0.86
GABPB1-204ENST00000396464 HRO43593 1189 aa9.68□□□□□ -0.86
GABPB1-204ENST00000396464 PLCB2Q00722 1185 aa9.68□□□□□ -0.86
GABPB1-204ENST00000396464 ZDHHC16Q969W1 377 aa9.68□□□□□ -0.86
GABPB1-204ENST00000396464 BCANQ96GW7 911 aa9.68□□□□□ -0.86
GABPB1-204ENST00000396464 ANO8Q9HCE9 1232 aaPredicted RBP9.67□□□□□ -0.86
GABPB1-204ENST00000396464 VPS9D1Q9Y2B5 631 aa9.67□□□□□ -0.86
GABPB1-204ENST00000396464 GOLGA8CPA6NN73 597 aa9.66□□□□□ -0.86
GABPB1-204ENST00000396464 BBXQ8WY36 941 aaPredicted RBP9.65□□□□□ -0.86
GABPB1-204ENST00000396464 PLA2G2EQ9NZK7 142 aa9.65□□□□□ -0.86
GABPB1-204ENST00000396464 CADPS2Q86UW7 1296 aa9.65□□□□□ -0.87
GABPB1-204ENST00000396464 EMILIN3Q9NT22 766 aa9.64□□□□□ -0.87
GABPB1-204ENST00000396464 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.64□□□□□ -0.87
GABPB1-204ENST00000396464 SLC4A5Q9BY07 1137 aa9.63□□□□□ -0.87
GABPB1-204ENST00000396464 ADAM33Q9BZ11 813 aa9.62□□□□□ -0.87
GABPB1-204ENST00000396464 MRPL50Q8N5N7 158 aaKnown RBP9.61□□□□□ -0.87
GABPB1-204ENST00000396464 NBPF3Q9H094 633 aa9.61□□□□□ -0.87
GABPB1-204ENST00000396464 PTPN5P54829 565 aa9.6□□□□□ -0.87
GABPB1-204ENST00000396464 SPRYD3Q8NCJ5 442 aa9.59□□□□□ -0.87
GABPB1-204ENST00000396464 FBXW7Q969H0 707 aa9.59□□□□□ -0.87
GABPB1-204ENST00000396464 ZBED2Q9BTP6 218 aa9.59□□□□□ -0.87
GABPB1-204ENST00000396464 TYW1BQ6NUM6 668 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms