RNA–Protein interactions for RNA: ENST00000396076.5

LDHB-203, Transcript of lactate dehydrogenase B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LDHB, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-203ENST00000396076 CAMSAP2Q08AD1 1489 aa35.3■■■■□ 3.24
LDHB-203ENST00000396076 ABCA9Q8IUA7 1624 aa35.27■■■■□ 3.24
LDHB-203ENST00000396076 CDC42BPBQ9Y5S2 1711 aa35.27■■■■□ 3.24
LDHB-203ENST00000396076 DNAJC5Q9H3Z4 198 aa35.26■■■■□ 3.23
LDHB-203ENST00000396076 MYO5CQ9NQX4 1742 aa35.25■■■■□ 3.23
LDHB-203ENST00000396076 ARHGAP5Q13017 1502 aa35.24■■■■□ 3.23
LDHB-203ENST00000396076 PTPRKQ15262 1439 aa35.23■■■■□ 3.23
LDHB-203ENST00000396076 EFCAB2Q5VUJ9 269 aa35.21■■■■□ 3.23
LDHB-203ENST00000396076 ARAP3Q8WWN8 1544 aa35.19■■■■□ 3.22
LDHB-203ENST00000396076 ABCC5O15440 1437 aa35.17■■■■□ 3.22
LDHB-203ENST00000396076 DAPK1P53355 1430 aa35.17■■■■□ 3.22
LDHB-203ENST00000396076 SAMD9LQ8IVG5 1584 aa35.15■■■■□ 3.22
LDHB-203ENST00000396076 DNMT1P26358 1616 aaKnown RBP35.14■■■■□ 3.22
LDHB-203ENST00000396076 CD109Q6YHK3 1445 aa35.12■■■■□ 3.21
LDHB-203ENST00000396076 HNRNPMP52272 730 aaKnown RBP eCLIP35.11■■■■□ 3.21
LDHB-203ENST00000396076 PLEKHH2Q8IVE3 1493 aa35.1■■■■□ 3.21
LDHB-203ENST00000396076 KIAA1107Q9UPP5 1409 aa35.09■■■■□ 3.21
LDHB-203ENST00000396076 CHIC2Q9UKJ5 165 aa35.09■■■■□ 3.21
LDHB-203ENST00000396076 MBD5Q9P267 1494 aa35.09■■■■□ 3.21
LDHB-203ENST00000396076 GLI2P10070 1586 aa35.08■■■■□ 3.21
LDHB-203ENST00000396076 RSPH4AQ5TD94 716 aa35.06■■■■□ 3.2
LDHB-203ENST00000396076 FANCAO15360 1455 aa35.06■■■■□ 3.2
LDHB-203ENST00000396076 SETD5Q9C0A6 1442 aa35.05■■■■□ 3.2
LDHB-203ENST00000396076 FAM69CQ0P6D2 419 aa35.04■■■■□ 3.2
LDHB-203ENST00000396076 ARHGEF5Q12774 1597 aa35.04■■■■□ 3.2
LDHB-203ENST00000396076 AKNAQ7Z591 1439 aa35.02■■■■□ 3.2
LDHB-203ENST00000396076 SYCP2Q9BX26 1530 aa35.02■■■■□ 3.2
LDHB-203ENST00000396076 DIP2BQ9P265 1576 aa35.01■■■■□ 3.2
LDHB-203ENST00000396076 HFM1A2PYH4 1435 aa35.01■■■■□ 3.19
LDHB-203ENST00000396076 ROCK1Q13464 1354 aa35■■■■□ 3.19
LDHB-203ENST00000396076 ARHGEF12Q9NZN5 1544 aa34.99■■■■□ 3.19
LDHB-203ENST00000396076 CCDC141Q6ZP82 1450 aa34.99■■■■□ 3.19
LDHB-203ENST00000396076 TSPY4P0CV99 314 aa34.98■■■■□ 3.19
LDHB-203ENST00000396076 TSPY10P0CW01 314 aa34.98■■■■□ 3.19
LDHB-203ENST00000396076 ABCC1P33527 1531 aa34.98■■■■□ 3.19
LDHB-203ENST00000396076 RRP7BPQ9NSQ0 103 aa34.97■■■■□ 3.19
LDHB-203ENST00000396076 RAB3GAP2Q9H2M9 1393 aa34.97■■■■□ 3.19
LDHB-203ENST00000396076 SHANK2Q9UPX8 1470 aa34.96■■■■□ 3.19
LDHB-203ENST00000396076 MAP3K4Q9Y6R4 1608 aa34.96■■■■□ 3.19
LDHB-203ENST00000396076 NAIPQ13075 1403 aa34.96■■■■□ 3.19
LDHB-203ENST00000396076 CROCC2H7BZ55 1655 aa34.95■■■■□ 3.18
LDHB-203ENST00000396076 HRCP23327 699 aa34.93■■■■□ 3.18
LDHB-203ENST00000396076 C9orf84Q5VXU9 1444 aa34.93■■■■□ 3.18
LDHB-203ENST00000396076 ADGRL2O95490 1459 aa34.91■■■■□ 3.18
LDHB-203ENST00000396076 ADGRL1O94910 1474 aa34.9■■■■□ 3.18
LDHB-203ENST00000396076 NCOA1Q15788 1441 aa34.9■■■■□ 3.18
LDHB-203ENST00000396076 TRAPPC8Q9Y2L5 1435 aa34.89■■■■□ 3.18
LDHB-203ENST00000396076 SCAPERQ9BY12 1400 aa34.88■■■■□ 3.17
LDHB-203ENST00000396076 ANKRD30AQ9BXX3 1397 aa34.88■■■■□ 3.17
LDHB-203ENST00000396076 CFAP74Q9C0B2 1584 aa34.88■■■■□ 3.17
LDHB-203ENST00000396076 NEO1Q92859 1461 aa34.87■■■■□ 3.17
LDHB-203ENST00000396076 ADGBQ8N7X0 1667 aa34.83■■■■□ 3.17
LDHB-203ENST00000396076 CCER1Q8TC90 406 aaPredicted RBP34.83■■■■□ 3.17
LDHB-203ENST00000396076 AFAP1Q8N556 730 aa34.82■■■■□ 3.16
LDHB-203ENST00000396076 MAST1Q9Y2H9 1570 aa34.82■■■■□ 3.16
LDHB-203ENST00000396076 GCC2Q8IWJ2 1684 aa34.81■■■■□ 3.16
LDHB-203ENST00000396076 KIF13AQ9H1H9 1805 aa34.77■■■■□ 3.16
LDHB-203ENST00000396076 SPAG9O60271 1321 aaKnown RBP34.75■■■■□ 3.15
LDHB-203ENST00000396076 KIF15Q9NS87 1388 aa34.72■■■■□ 3.15
LDHB-203ENST00000396076 TEX14Q8IWB6 1497 aa34.72■■■■□ 3.15
LDHB-203ENST00000396076 RTEL1-TNFRSF6BF6WH68 1400 aa34.72■■■■□ 3.15
LDHB-203ENST00000396076 DHX57Q6P158 1386 aaKnown RBP34.72■■■■□ 3.15
LDHB-203ENST00000396076 ZNF518AQ6AHZ1 1483 aa34.7■■■■□ 3.14
LDHB-203ENST00000396076 KDM6BO15054 1643 aa34.7■■■■□ 3.14
LDHB-203ENST00000396076 PPRC1Q5VV67 1664 aaKnown RBP34.69■■■■□ 3.14
LDHB-203ENST00000396076 POGZQ7Z3K3 1410 aa34.69■■■■□ 3.14
LDHB-203ENST00000396076 ANKRD50Q9ULJ7 1429 aa34.67■■■■□ 3.14
LDHB-203ENST00000396076 DENND4BO75064 1496 aaPredicted RBP34.67■■■■□ 3.14
LDHB-203ENST00000396076 ACIN1Q9UKV3 1341 aaKnown RBP34.66■■■■□ 3.14
LDHB-203ENST00000396076 TSPOAP1O95153 1857 aa34.66■■■■□ 3.14
LDHB-203ENST00000396076 PLXNC1O60486 1568 aa34.65■■■■□ 3.14
LDHB-203ENST00000396076 ZFYVE16Q7Z3T8 1539 aa34.63■■■■□ 3.13
LDHB-203ENST00000396076 RAPGEF3O95398 923 aa34.6■■■■□ 3.13
LDHB-203ENST00000396076 KDM5CP41229 1560 aa34.6■■■■□ 3.13
LDHB-203ENST00000396076 ATP7AQ04656 1500 aa34.59■■■■□ 3.13
LDHB-203ENST00000396076 INO80Q9ULG1 1556 aaPredicted RBP34.59■■■■□ 3.13
LDHB-203ENST00000396076 TRIM52Q96A61 297 aa34.58■■■■□ 3.13
LDHB-203ENST00000396076 MYT1LQ9UL68 1186 aa34.58■■■■□ 3.13
LDHB-203ENST00000396076 DUOX2Q9NRD8 1548 aa34.56■■■■□ 3.12
LDHB-203ENST00000396076 TRHP20396 242 aaPredicted RBP34.55■■■■□ 3.12
LDHB-203ENST00000396076 MLH3Q9UHC1 1453 aa34.55■■■■□ 3.12
LDHB-203ENST00000396076 CLSPNQ9HAW4 1339 aa34.52■■■■□ 3.12
LDHB-203ENST00000396076 ZEB1P37275 1124 aaPredicted RBP34.52■■■■□ 3.12
LDHB-203ENST00000396076 RICTORQ6R327 1708 aa34.49■■■■□ 3.11
LDHB-203ENST00000396076 ERBINQ96RT1 1412 aa34.49■■■■□ 3.11
LDHB-203ENST00000396076 KIDINS220Q9ULH0 1771 aa34.49■■■■□ 3.11
LDHB-203ENST00000396076 HECW2Q9P2P5 1572 aa34.47■■■■□ 3.11
LDHB-203ENST00000396076 FRMPD1Q5SYB0 1578 aa34.44■■■■□ 3.1
LDHB-203ENST00000396076 DHX29Q7Z478 1369 aaKnown RBP34.44■■■■□ 3.1
LDHB-203ENST00000396076 MPHOSPH9Q99550 1183 aa34.43■■■■□ 3.1
LDHB-203ENST00000396076 COL17A1Q9UMD9 1497 aaPredicted RBP34.41■■■■□ 3.1
LDHB-203ENST00000396076 ZMYM4Q5VZL5 1548 aa34.38■■■■□ 3.09
LDHB-203ENST00000396076 NUP155O75694 1391 aa34.38■■■■□ 3.09
LDHB-203ENST00000396076 A2MP01023 1474 aa34.36■■■■□ 3.09
LDHB-203ENST00000396076 PZPP20742 1482 aa34.36■■■■□ 3.09
LDHB-203ENST00000396076 SLC4A1APQ9BWU0 796 aaKnown RBP34.35■■■■□ 3.09
LDHB-203ENST00000396076 MAGI2Q86UL8 1455 aa34.34■■■■□ 3.09
LDHB-203ENST00000396076 KDM5DQ9BY66 1539 aa34.34■■■■□ 3.09
LDHB-203ENST00000396076 ABCA6Q8N139 1617 aa34.33■■■■□ 3.09
LDHB-203ENST00000396076 YEATS2Q9ULM3 1422 aa34.32■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms