RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 MAP3K4Q9Y6R4 1608 aa13.5□□□□□ -0.25
CCR9-203ENST00000395963 CDC42BPBQ9Y5S2 1711 aa13.47□□□□□ -0.25
CCR9-203ENST00000395963 ARID3CA6NKF2 412 aa13.47□□□□□ -0.25
CCR9-203ENST00000395963 KIAA1107Q9UPP5 1409 aa13.47□□□□□ -0.25
CCR9-203ENST00000395963 ARHGEF5Q12774 1597 aa13.46□□□□□ -0.25
CCR9-203ENST00000395963 NEO1Q92859 1461 aa13.46□□□□□ -0.26
CCR9-203ENST00000395963 RSPH4AQ5TD94 716 aa13.45□□□□□ -0.26
CCR9-203ENST00000395963 ARHGAP5Q13017 1502 aa13.45□□□□□ -0.26
CCR9-203ENST00000395963 TEX14Q8IWB6 1497 aa13.44□□□□□ -0.26
CCR9-203ENST00000395963 CAMSAP2Q08AD1 1489 aa13.43□□□□□ -0.26
CCR9-203ENST00000395963 SHANK2Q9UPX8 1470 aa13.43□□□□□ -0.26
CCR9-203ENST00000395963 DNMT1P26358 1616 aaKnown RBP13.43□□□□□ -0.26
CCR9-203ENST00000395963 CD109Q6YHK3 1445 aa13.43□□□□□ -0.26
CCR9-203ENST00000395963 CFDP1Q9UEE9 299 aaPredicted RBP13.43□□□□□ -0.26
CCR9-203ENST00000395963 AKNAQ7Z591 1439 aa13.42□□□□□ -0.26
CCR9-203ENST00000395963 EFCAB2Q5VUJ9 269 aa13.42□□□□□ -0.26
CCR9-203ENST00000395963 SAMD9LQ8IVG5 1584 aa13.42□□□□□ -0.26
CCR9-203ENST00000395963 ABCC1P33527 1531 aa13.42□□□□□ -0.26
CCR9-203ENST00000395963 KIF13AQ9H1H9 1805 aa13.41□□□□□ -0.26
CCR9-203ENST00000395963 CROCC2H7BZ55 1655 aa13.41□□□□□ -0.26
CCR9-203ENST00000395963 ACIN1Q9UKV3 1341 aaKnown RBP13.41□□□□□ -0.26
CCR9-203ENST00000395963 FANCAO15360 1455 aa13.4□□□□□ -0.26
CCR9-203ENST00000395963 MAST1Q9Y2H9 1570 aa13.4□□□□□ -0.26
CCR9-203ENST00000395963 KCNH8Q96L42 1107 aa13.39□□□□□ -0.27
CCR9-203ENST00000395963 PPARGC1BQ86YN6 1023 aaKnown RBP13.39□□□□□ -0.27
CCR9-203ENST00000395963 CCDC141Q6ZP82 1450 aa13.38□□□□□ -0.27
CCR9-203ENST00000395963 ROCK1Q13464 1354 aa13.37□□□□□ -0.27
CCR9-203ENST00000395963 ADGRL2O95490 1459 aa13.37□□□□□ -0.27
CCR9-203ENST00000395963 MBD5Q9P267 1494 aa13.37□□□□□ -0.27
CCR9-203ENST00000395963 ADGBQ8N7X0 1667 aa13.36□□□□□ -0.27
CCR9-203ENST00000395963 DAPK1P53355 1430 aa13.36□□□□□ -0.27
CCR9-203ENST00000395963 PPRC1Q5VV67 1664 aaKnown RBP13.36□□□□□ -0.27
CCR9-203ENST00000395963 ADGRL1O94910 1474 aa13.34□□□□□ -0.27
CCR9-203ENST00000395963 RTEL1-TNFRSF6BF6WH68 1400 aa13.34□□□□□ -0.27
CCR9-203ENST00000395963 SYCP2Q9BX26 1530 aa13.34□□□□□ -0.27
CCR9-203ENST00000395963 FAM69CQ0P6D2 419 aa13.34□□□□□ -0.27
CCR9-203ENST00000395963 PLXNC1O60486 1568 aa13.33□□□□□ -0.27
CCR9-203ENST00000395963 ABCC5O15440 1437 aa13.33□□□□□ -0.28
CCR9-203ENST00000395963 ZNF518AQ6AHZ1 1483 aa13.33□□□□□ -0.28
CCR9-203ENST00000395963 KDM5CP41229 1560 aa13.33□□□□□ -0.28
CCR9-203ENST00000395963 FAM50AQ14320 339 aaKnown RBP13.32□□□□□ -0.28
CCR9-203ENST00000395963 GCC2Q8IWJ2 1684 aa13.32□□□□□ -0.28
CCR9-203ENST00000395963 POGZQ7Z3K3 1410 aa13.31□□□□□ -0.28
CCR9-203ENST00000395963 ZMYM4Q5VZL5 1548 aa13.3□□□□□ -0.28
CCR9-203ENST00000395963 HFM1A2PYH4 1435 aa13.3□□□□□ -0.28
CCR9-203ENST00000395963 HRCP23327 699 aa13.3□□□□□ -0.28
CCR9-203ENST00000395963 INO80Q9ULG1 1556 aaPredicted RBP13.3□□□□□ -0.28
CCR9-203ENST00000395963 DENND4BO75064 1496 aaPredicted RBP13.3□□□□□ -0.28
CCR9-203ENST00000395963 MAGI2Q86UL8 1455 aa13.29□□□□□ -0.28
CCR9-203ENST00000395963 C9orf84Q5VXU9 1444 aa13.29□□□□□ -0.28
CCR9-203ENST00000395963 SCAPERQ9BY12 1400 aa13.28□□□□□ -0.28
CCR9-203ENST00000395963 MLH3Q9UHC1 1453 aa13.28□□□□□ -0.28
CCR9-203ENST00000395963 ARHGEF12Q9NZN5 1544 aa13.28□□□□□ -0.28
CCR9-203ENST00000395963 ANKRD30AQ9BXX3 1397 aa13.28□□□□□ -0.28
CCR9-203ENST00000395963 RICTORQ6R327 1708 aa13.28□□□□□ -0.28
CCR9-203ENST00000395963 TSPY4P0CV99 314 aa13.28□□□□□ -0.28
CCR9-203ENST00000395963 TSPY10P0CW01 314 aa13.28□□□□□ -0.28
CCR9-203ENST00000395963 ZNF777Q9ULD5 760 aaPredicted RBP13.27□□□□□ -0.29
CCR9-203ENST00000395963 ZFYVE16Q7Z3T8 1539 aa13.26□□□□□ -0.29
CCR9-203ENST00000395963 HECW2Q9P2P5 1572 aa13.26□□□□□ -0.29
CCR9-203ENST00000395963 ZNF644Q9H582 1327 aaPredicted RBP13.26□□□□□ -0.29
CCR9-203ENST00000395963 MYT1Q01538 1121 aa13.26□□□□□ -0.29
CCR9-203ENST00000395963 NCOA1Q15788 1441 aa13.25□□□□□ -0.29
CCR9-203ENST00000395963 ATP7AQ04656 1500 aa13.25□□□□□ -0.29
CCR9-203ENST00000395963 PTPRKQ15262 1439 aa13.25□□□□□ -0.29
CCR9-203ENST00000395963 DUOX2Q9NRD8 1548 aa13.24□□□□□ -0.29
CCR9-203ENST00000395963 SETD5Q9C0A6 1442 aa13.24□□□□□ -0.29
CCR9-203ENST00000395963 TRAPPC8Q9Y2L5 1435 aa13.24□□□□□ -0.29
CCR9-203ENST00000395963 REREQ9P2R6 1566 aa13.24□□□□□ -0.29
CCR9-203ENST00000395963 PCGF6Q9BYE7 350 aa13.23□□□□□ -0.29
CCR9-203ENST00000395963 EIF2AK4Q9P2K8 1649 aaKnown RBP13.23□□□□□ -0.29
CCR9-203ENST00000395963 FRMPD1Q5SYB0 1578 aa13.23□□□□□ -0.29
CCR9-203ENST00000395963 NAIPQ13075 1403 aa13.22□□□□□ -0.29
CCR9-203ENST00000395963 ERBINQ96RT1 1412 aa13.22□□□□□ -0.29
CCR9-203ENST00000395963 TSPOAP1O95153 1857 aa13.22□□□□□ -0.29
CCR9-203ENST00000395963 BCORL1Q5H9F3 1711 aa13.22□□□□□ -0.29
CCR9-203ENST00000395963 HNRNPMP52272 730 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCR9-203ENST00000395963 SPAG9O60271 1321 aaKnown RBP13.21□□□□□ -0.29
CCR9-203ENST00000395963 KIDINS220Q9ULH0 1771 aa13.2□□□□□ -0.3
CCR9-203ENST00000395963 KIF15Q9NS87 1388 aa13.18□□□□□ -0.3
CCR9-203ENST00000395963 FAM135AQ9P2D6 1515 aa13.18□□□□□ -0.3
CCR9-203ENST00000395963 ARHGEF40Q8TER5 1519 aa13.17□□□□□ -0.3
CCR9-203ENST00000395963 KDM5DQ9BY66 1539 aa13.17□□□□□ -0.3
CCR9-203ENST00000395963 KDM6BO15054 1643 aa13.17□□□□□ -0.3
CCR9-203ENST00000395963 ANKRD50Q9ULJ7 1429 aa13.17□□□□□ -0.3
CCR9-203ENST00000395963 UNC13BO14795 1591 aa13.16□□□□□ -0.3
CCR9-203ENST00000395963 DIP2CQ9Y2E4 1556 aa13.16□□□□□ -0.3
CCR9-203ENST00000395963 RAB3GAP2Q9H2M9 1393 aa13.15□□□□□ -0.3
CCR9-203ENST00000395963 AGLP35573 1532 aa13.15□□□□□ -0.3
CCR9-203ENST00000395963 ABCA6Q8N139 1617 aa13.15□□□□□ -0.31
CCR9-203ENST00000395963 TRHP20396 242 aaPredicted RBP13.14□□□□□ -0.31
CCR9-203ENST00000395963 DHX29Q7Z478 1369 aaKnown RBP13.14□□□□□ -0.31
CCR9-203ENST00000395963 DEPDC5O75140 1603 aa13.14□□□□□ -0.31
CCR9-203ENST00000395963 ITGAEP38570 1179 aa13.14□□□□□ -0.31
CCR9-203ENST00000395963 A2MP01023 1474 aa13.14□□□□□ -0.31
CCR9-203ENST00000395963 AFAP1Q8N556 730 aa13.13□□□□□ -0.31
CCR9-203ENST00000395963 RNF17Q9BXT8 1623 aaKnown RBP13.13□□□□□ -0.31
CCR9-203ENST00000395963 CLSPNQ9HAW4 1339 aa13.13□□□□□ -0.31
CCR9-203ENST00000395963 ATP10AO60312 1499 aa13.12□□□□□ -0.31
CCR9-203ENST00000395963 PRDM15P57071 1507 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms