RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 FGD1P98174 961 aa12.54□□□□□ -0.4
MSH5-205ENST00000395853 RAPGEF2Q9Y4G8 1499 aa12.53□□□□□ -0.4
MSH5-205ENST00000395853 KIAA0556O60303 1618 aa12.53□□□□□ -0.4
MSH5-205ENST00000395853 WDR7Q9Y4E6 1490 aa12.53□□□□□ -0.4
MSH5-205ENST00000395853 MAGI3Q5TCQ9 1506 aa12.53□□□□□ -0.4
MSH5-205ENST00000395853 RANGAP1P46060 587 aaPredicted RBP12.53□□□□□ -0.4
MSH5-205ENST00000395853 CFAP43Q8NDM7 1665 aa12.51□□□□□ -0.41
MSH5-205ENST00000395853 KLHL34Q8N239 644 aa12.51□□□□□ -0.41
MSH5-205ENST00000395853 A0A0U1RQG5 324 aaPredicted RBP12.48□□□□□ -0.41
MSH5-205ENST00000395853 CD109Q6YHK3 1445 aa12.48□□□□□ -0.41
MSH5-205ENST00000395853 VSIG10Q8N0Z9 540 aa12.46□□□□□ -0.41
MSH5-205ENST00000395853 BCANQ96GW7 911 aa12.46□□□□□ -0.42
MSH5-205ENST00000395853 CLIP1P30622 1438 aa12.45□□□□□ -0.42
MSH5-205ENST00000395853 ABCA8O94911 1581 aa12.45□□□□□ -0.42
MSH5-205ENST00000395853 AAMPQ13685 434 aa12.45□□□□□ -0.42
MSH5-205ENST00000395853 PRXQ9BXM0 1461 aa12.44□□□□□ -0.42
MSH5-205ENST00000395853 ARAP3Q8WWN8 1544 aa12.44□□□□□ -0.42
MSH5-205ENST00000395853 PHLDB1Q86UU1 1377 aa12.44□□□□□ -0.42
MSH5-205ENST00000395853 CTTNBP2Q8WZ74 1663 aa12.44□□□□□ -0.42
MSH5-205ENST00000395853 BCL11BQ9C0K0 894 aaPredicted RBP12.43□□□□□ -0.42
MSH5-205ENST00000395853 ARXQ96QS3 562 aa12.42□□□□□ -0.42
MSH5-205ENST00000395853 FBXO41Q8TF61 875 aa12.41□□□□□ -0.42
MSH5-205ENST00000395853 RBM10P98175 930 aaKnown RBP12.4□□□□□ -0.42
MSH5-205ENST00000395853 NBR1Q14596 966 aa12.38□□□□□ -0.43
MSH5-205ENST00000395853 TIMELESSQ9UNS1 1208 aa12.38□□□□□ -0.43
MSH5-205ENST00000395853 KCNH8Q96L42 1107 aa12.37□□□□□ -0.43
MSH5-205ENST00000395853 RSPH6AQ9H0K4 717 aa12.37□□□□□ -0.43
MSH5-205ENST00000395853 VPS8Q8N3P4 1428 aa12.37□□□□□ -0.43
MSH5-205ENST00000395853 ADAMTSL3P82987 1691 aa12.37□□□□□ -0.43
MSH5-205ENST00000395853 FKBP8Q14318 412 aa12.36□□□□□ -0.43
MSH5-205ENST00000395853 ABCA9Q8IUA7 1624 aa12.35□□□□□ -0.43
MSH5-205ENST00000395853 TAF7LQ5H9L4 462 aa12.35□□□□□ -0.43
MSH5-205ENST00000395853 NEO1Q92859 1461 aa12.34□□□□□ -0.43
MSH5-205ENST00000395853 PTPRMP28827 1452 aa12.34□□□□□ -0.43
MSH5-205ENST00000395853 RTL5Q5HYW3 569 aaPredicted RBP12.34□□□□□ -0.43
MSH5-205ENST00000395853 ATP10BO94823 1461 aa12.32□□□□□ -0.44
MSH5-205ENST00000395853 BCORL1Q5H9F3 1711 aa12.3□□□□□ -0.44
MSH5-205ENST00000395853 C11orf95C9JLR9 678 aaPredicted RBP12.29□□□□□ -0.44
MSH5-205ENST00000395853 PCF11O94913 1555 aaKnown RBP12.28□□□□□ -0.44
MSH5-205ENST00000395853 NOP58Q9Y2X3 529 aaKnown RBP12.27□□□□□ -0.44
MSH5-205ENST00000395853 ITGAEP38570 1179 aa12.26□□□□□ -0.45
MSH5-205ENST00000395853 SAMD9Q5K651 1589 aa12.26□□□□□ -0.45
MSH5-205ENST00000395853 FRMPD1Q5SYB0 1578 aa12.26□□□□□ -0.45
MSH5-205ENST00000395853 LMTK3Q96Q04 1460 aa12.25□□□□□ -0.45
MSH5-205ENST00000395853 RAPGEF6Q8TEU7 1601 aa12.25□□□□□ -0.45
MSH5-205ENST00000395853 MADDQ8WXG6 1647 aa12.25□□□□□ -0.45
MSH5-205ENST00000395853 ARHGAP35Q9NRY4 1499 aa12.25□□□□□ -0.45
MSH5-205ENST00000395853 CDK11AQ9UQ88 783 aaPredicted RBP12.24□□□□□ -0.45
MSH5-205ENST00000395853 ARHGEF40Q8TER5 1519 aa12.24□□□□□ -0.45
MSH5-205ENST00000395853 RAPGEF3O95398 923 aa12.24□□□□□ -0.45
MSH5-205ENST00000395853 CFAP74Q9C0B2 1584 aa12.23□□□□□ -0.45
MSH5-205ENST00000395853 FHOD3Q2V2M9 1422 aa12.22□□□□□ -0.45
MSH5-205ENST00000395853 DENND4BO75064 1496 aaPredicted RBP12.21□□□□□ -0.45
MSH5-205ENST00000395853 POGZQ7Z3K3 1410 aa12.21□□□□□ -0.45
MSH5-205ENST00000395853 KANK4Q5T7N3 995 aaPredicted RBP12.21□□□□□ -0.46
MSH5-205ENST00000395853 ARID4BQ4LE39 1312 aaPredicted RBP12.21□□□□□ -0.46
MSH5-205ENST00000395853 HNRNPUL2Q1KMD3 747 aaKnown RBP12.2□□□□□ -0.46
MSH5-205ENST00000395853 ZMYM4Q5VZL5 1548 aa12.2□□□□□ -0.46
MSH5-205ENST00000395853 RICTORQ6R327 1708 aa12.2□□□□□ -0.46
MSH5-205ENST00000395853 MAGI2Q86UL8 1455 aa12.19□□□□□ -0.46
MSH5-205ENST00000395853 RIMS1Q86UR5 1692 aaKnown RBP12.19□□□□□ -0.46
MSH5-205ENST00000395853 AKNAQ7Z591 1439 aa12.19□□□□□ -0.46
MSH5-205ENST00000395853 FANCAO15360 1455 aa12.19□□□□□ -0.46
MSH5-205ENST00000395853 NUP153P49790 1475 aaKnown RBP12.19□□□□□ -0.46
MSH5-205ENST00000395853 EFCAB5A4FU69 1503 aa12.18□□□□□ -0.46
MSH5-205ENST00000395853 ARID3CA6NKF2 412 aa12.17□□□□□ -0.46
MSH5-205ENST00000395853 P3H3Q8IVL6 736 aa12.17□□□□□ -0.46
MSH5-205ENST00000395853 PLEKHD1A6NEE1 506 aa12.17□□□□□ -0.46
MSH5-205ENST00000395853 ZFYVE16Q7Z3T8 1539 aa12.15□□□□□ -0.47
MSH5-205ENST00000395853 WASHC2CQ9Y4E1 1318 aa12.14□□□□□ -0.47
MSH5-205ENST00000395853 PAK3O75914 559 aaPredicted RBP12.14□□□□□ -0.47
MSH5-205ENST00000395853 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.13□□□□□ -0.47
MSH5-205ENST00000395853 WASHC2AQ641Q2 1341 aa12.13□□□□□ -0.47
MSH5-205ENST00000395853 CERKQ8TCT0 537 aa12.13□□□□□ -0.47
MSH5-205ENST00000395853 TTC37Q6PGP7 1564 aa12.13□□□□□ -0.47
MSH5-205ENST00000395853 BRPF3Q9ULD4 1205 aa12.12□□□□□ -0.47
MSH5-205ENST00000395853 RRP9O43818 475 aaKnown RBP12.11□□□□□ -0.47
MSH5-205ENST00000395853 HSP90AA2PQ14568 343 aaPredicted RBP12.11□□□□□ -0.47
MSH5-205ENST00000395853 FER1L4A9Z1Z3 1794 aa12.1□□□□□ -0.47
MSH5-205ENST00000395853 ARHGEF12Q9NZN5 1544 aa12.1□□□□□ -0.47
MSH5-205ENST00000395853 HECW1Q76N89 1606 aa12.09□□□□□ -0.47
MSH5-205ENST00000395853 HSPA2P54652 639 aa12.09□□□□□ -0.47
MSH5-205ENST00000395853 PAXIP1Q6ZW49 1069 aaPredicted RBP12.09□□□□□ -0.47
MSH5-205ENST00000395853 YEATS2Q9ULM3 1422 aa12.09□□□□□ -0.47
MSH5-205ENST00000395853 PLCH2O75038 1416 aa12.09□□□□□ -0.47
MSH5-205ENST00000395853 ATP10AO60312 1499 aa12.08□□□□□ -0.48
MSH5-205ENST00000395853 SIGLEC1Q9BZZ2 1709 aa12.08□□□□□ -0.48
MSH5-205ENST00000395853 PREX1Q8TCU6 1659 aa12.08□□□□□ -0.48
MSH5-205ENST00000395853 DMRT2Q9Y5R5 561 aa12.08□□□□□ -0.48
MSH5-205ENST00000395853 C9orf84Q5VXU9 1444 aa12.07□□□□□ -0.48
MSH5-205ENST00000395853 ZNF326Q5BKZ1 582 aaKnown RBP12.07□□□□□ -0.48
MSH5-205ENST00000395853 TIAM1Q13009 1591 aa12.06□□□□□ -0.48
MSH5-205ENST00000395853 RSPH4AQ5TD94 716 aa12.06□□□□□ -0.48
MSH5-205ENST00000395853 FAM43AQ8N2R8 423 aa12.06□□□□□ -0.48
MSH5-205ENST00000395853 USP35Q9P2H5 1018 aa12.06□□□□□ -0.48
MSH5-205ENST00000395853 SCAPERQ9BY12 1400 aa12.06□□□□□ -0.48
MSH5-205ENST00000395853 NEFMP07197 916 aa12.05□□□□□ -0.48
MSH5-205ENST00000395853 RRBP1Q9P2E9 1410 aaKnown RBP12.04□□□□□ -0.48
MSH5-205ENST00000395853 ATP1B4Q9UN42 357 aaPredicted RBP12.04□□□□□ -0.48
MSH5-205ENST00000395853 SETD1BQ9UPS6 1966 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms