RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 EMILIN3Q9NT22 766 aa10.31□□□□□ -0.76
HMGB1P10-201ENST00000395823 GALR2O43603 387 aaPredicted RBP10.3□□□□□ -0.76
HMGB1P10-201ENST00000395823 RBM26Q5T8P6 1007 aaKnown RBP10.3□□□□□ -0.76
HMGB1P10-201ENST00000395823 BARGINQ6ZT62 677 aa10.3□□□□□ -0.76
HMGB1P10-201ENST00000395823 TRIM35Q9UPQ4 493 aa10.3□□□□□ -0.76
HMGB1P10-201ENST00000395823 DSG2Q14126 1118 aa10.28□□□□□ -0.76
HMGB1P10-201ENST00000395823 PDCD7Q8N8D1 485 aaKnown RBP10.28□□□□□ -0.76
HMGB1P10-201ENST00000395823 DPYSL4O14531 572 aa10.27□□□□□ -0.77
HMGB1P10-201ENST00000395823 MICALL2Q8IY33 904 aa10.27□□□□□ -0.77
HMGB1P10-201ENST00000395823 PDIA6Q15084 440 aa10.24□□□□□ -0.77
HMGB1P10-201ENST00000395823 GPIHBP1Q8IV16 184 aa10.22□□□□□ -0.77
HMGB1P10-201ENST00000395823 ATN1P54259 1190 aaPredicted RBP10.21□□□□□ -0.77
HMGB1P10-201ENST00000395823 FOXK1P85037 733 aa10.21□□□□□ -0.77
HMGB1P10-201ENST00000395823 EVX2Q03828 476 aa10.21□□□□□ -0.77
HMGB1P10-201ENST00000395823 ERICH6Q7L0X2 663 aa10.21□□□□□ -0.77
HMGB1P10-201ENST00000395823 IRX5P78411 483 aaPredicted RBP10.2□□□□□ -0.78
HMGB1P10-201ENST00000395823 TMEM121BQ9BXQ6 578 aaPredicted RBP10.2□□□□□ -0.78
HMGB1P10-201ENST00000395823 SPDYE16A6NNV3 312 aaPredicted RBP10.19□□□□□ -0.78
HMGB1P10-201ENST00000395823 GPR37O15354 613 aa10.19□□□□□ -0.78
HMGB1P10-201ENST00000395823 KIF3CO14782 793 aa10.18□□□□□ -0.78
HMGB1P10-201ENST00000395823 C14orf37Q86TY3 774 aa10.18□□□□□ -0.78
HMGB1P10-201ENST00000395823 TMC2Q8TDI7 906 aa10.18□□□□□ -0.78
HMGB1P10-201ENST00000395823 AK7Q96M32 723 aa10.18□□□□□ -0.78
HMGB1P10-201ENST00000395823 C2orf72A6NCS6 295 aa10.17□□□□□ -0.78
HMGB1P10-201ENST00000395823 GPBP1L1Q9HC44 474 aaPredicted RBP10.17□□□□□ -0.78
HMGB1P10-201ENST00000395823 ATMINO43313 823 aaPredicted RBP10.16□□□□□ -0.78
HMGB1P10-201ENST00000395823 PLPP6Q8IY26 295 aa10.16□□□□□ -0.78
HMGB1P10-201ENST00000395823 ASTLQ6HA08 431 aaPredicted RBP10.15□□□□□ -0.78
HMGB1P10-201ENST00000395823 OCEL1Q9H607 264 aa10.14□□□□□ -0.79
HMGB1P10-201ENST00000395823 BOLA1Q9Y3E2 137 aa10.14□□□□□ -0.79
HMGB1P10-201ENST00000395823 IER5LQ5T953 404 aa10.13□□□□□ -0.79
HMGB1P10-201ENST00000395823 TRIM66O15016 1216 aa10.12□□□□□ -0.79
HMGB1P10-201ENST00000395823 HAX1O00165 279 aa10.11□□□□□ -0.79
HMGB1P10-201ENST00000395823 TMEM92Q6UXU6 159 aa10.11□□□□□ -0.79
HMGB1P10-201ENST00000395823 KRI1Q8N9T8 703 aaKnown RBP10.11□□□□□ -0.79
HMGB1P10-201ENST00000395823 CLCN6P51797 869 aa10.09□□□□□ -0.79
HMGB1P10-201ENST00000395823 KDM4CQ9H3R0 1056 aa10.09□□□□□ -0.79
HMGB1P10-201ENST00000395823 PDE4DQ08499 809 aa10.08□□□□□ -0.8
HMGB1P10-201ENST00000395823 GRXCR2A6NFK2 248 aa10.06□□□□□ -0.8
HMGB1P10-201ENST00000395823 OXER1Q8TDS5 423 aa10.06□□□□□ -0.8
HMGB1P10-201ENST00000395823 OSBPP22059 807 aa10.05□□□□□ -0.8
HMGB1P10-201ENST00000395823 UPF1Q92900 1129 aaKnown RBP eCLIP10.05□□□□□ -0.8
HMGB1P10-201ENST00000395823 PLCG2P16885 1265 aa10.04□□□□□ -0.8
HMGB1P10-201ENST00000395823 PRIM1P49642 420 aaKnown RBP10.04□□□□□ -0.8
HMGB1P10-201ENST00000395823 MAP3K9P80192 1104 aa10.04□□□□□ -0.8
HMGB1P10-201ENST00000395823 IL27Q8NEV9 243 aa10.04□□□□□ -0.8
HMGB1P10-201ENST00000395823 PELP1Q8IZL8 1130 aaKnown RBP10.03□□□□□ -0.8
HMGB1P10-201ENST00000395823 COLQQ9Y215 455 aaPredicted RBP10.03□□□□□ -0.8
HMGB1P10-201ENST00000395823 NUTM2FA1L443 756 aa10.02□□□□□ -0.81
HMGB1P10-201ENST00000395823 G3V3G9 751 aa10.01□□□□□ -0.81
HMGB1P10-201ENST00000395823 PTGER2P43116 358 aa10.01□□□□□ -0.81
HMGB1P10-201ENST00000395823 CCDC102AQ96A19 550 aa10.01□□□□□ -0.81
HMGB1P10-201ENST00000395823 MAP2K5Q13163 448 aa10□□□□□ -0.81
HMGB1P10-201ENST00000395823 DDX12PQ92771 950 aa10□□□□□ -0.81
HMGB1P10-201ENST00000395823 L3MBTL3Q96JM7 780 aaPredicted RBP10□□□□□ -0.81
HMGB1P10-201ENST00000395823 MINK1Q8N4C8 1332 aaPredicted RBP10□□□□□ -0.81
HMGB1P10-201ENST00000395823 FECHP22830 423 aa9.99□□□□□ -0.81
HMGB1P10-201ENST00000395823 ARXQ96QS3 562 aa9.99□□□□□ -0.81
HMGB1P10-201ENST00000395823 POTEFA5A3E0 1075 aa9.98□□□□□ -0.81
HMGB1P10-201ENST00000395823 FAM117AQ9C073 453 aa9.98□□□□□ -0.81
HMGB1P10-201ENST00000395823 IRF6O14896 467 aa9.97□□□□□ -0.81
HMGB1P10-201ENST00000395823 GNPATO15228 680 aa9.97□□□□□ -0.81
HMGB1P10-201ENST00000395823 GABBR2O75899 941 aa9.96□□□□□ -0.82
HMGB1P10-201ENST00000395823 AMHR2Q16671 573 aa9.96□□□□□ -0.82
HMGB1P10-201ENST00000395823 PLEKHG3A1L390 1219 aa9.95□□□□□ -0.82
HMGB1P10-201ENST00000395823 EVI5O60447 810 aa9.95□□□□□ -0.82
HMGB1P10-201ENST00000395823 PARP9Q8IXQ6 854 aa9.95□□□□□ -0.82
HMGB1P10-201ENST00000395823 FCHSD2O94868 740 aa9.94□□□□□ -0.82
HMGB1P10-201ENST00000395823 HIC1Q14526 733 aa9.94□□□□□ -0.82
HMGB1P10-201ENST00000395823 DAXXQ9UER7 740 aaPredicted RBP9.94□□□□□ -0.82
HMGB1P10-201ENST00000395823 SUPT5HO00267 1087 aaKnown RBP9.93□□□□□ -0.82
HMGB1P10-201ENST00000395823 SEC24BO95487 1268 aa9.92□□□□□ -0.82
HMGB1P10-201ENST00000395823 PTGDRQ13258 359 aa9.92□□□□□ -0.82
HMGB1P10-201ENST00000395823 PTCD2Q8WV60 388 aaKnown RBP9.92□□□□□ -0.82
HMGB1P10-201ENST00000395823 TBC1D12O60347 775 aa9.9□□□□□ -0.82
HMGB1P10-201ENST00000395823 ANO8Q9HCE9 1232 aaPredicted RBP9.89□□□□□ -0.83
HMGB1P10-201ENST00000395823 SLC39A7Q92504 469 aa9.88□□□□□ -0.83
HMGB1P10-201ENST00000395823 CDHR5Q9HBB8 845 aa9.88□□□□□ -0.83
HMGB1P10-201ENST00000395823 ZNF316A6NFI3 1004 aaPredicted RBP9.87□□□□□ -0.83
HMGB1P10-201ENST00000395823 DCBLD2Q96PD2 775 aa9.87□□□□□ -0.83
HMGB1P10-201ENST00000395823 SLC34A2O95436 690 aa9.86□□□□□ -0.83
HMGB1P10-201ENST00000395823 DDRGK1Q96HY6 314 aa9.86□□□□□ -0.83
HMGB1P10-201ENST00000395823 NPDC1Q9NQX5 325 aaPredicted RBP9.86□□□□□ -0.83
HMGB1P10-201ENST00000395823 C7P10643 843 aa9.85□□□□□ -0.83
HMGB1P10-201ENST00000395823 POTEIP0CG38 1075 aa9.84□□□□□ -0.83
HMGB1P10-201ENST00000395823 REPIN1Q9BWE0 567 aaKnown RBP9.84□□□□□ -0.83
HMGB1P10-201ENST00000395823 METRNQ9UJH8 293 aa9.84□□□□□ -0.83
HMGB1P10-201ENST00000395823 EN1Q05925 392 aaPredicted RBP9.83□□□□□ -0.84
HMGB1P10-201ENST00000395823 TTLL12Q14166 644 aaPredicted RBP9.83□□□□□ -0.84
HMGB1P10-201ENST00000395823 C3orf67Q6ZVT6 689 aa9.83□□□□□ -0.84
HMGB1P10-201ENST00000395823 MS4A1P11836 297 aa9.82□□□□□ -0.84
HMGB1P10-201ENST00000395823 GIGYF2Q6Y7W6 1299 aaKnown RBP9.82□□□□□ -0.84
HMGB1P10-201ENST00000395823 HOMEZQ8IX15 550 aa9.82□□□□□ -0.84
HMGB1P10-201ENST00000395823 PHF14O94880 888 aa9.81□□□□□ -0.84
HMGB1P10-201ENST00000395823 ZMYND15Q9H091 742 aa9.81□□□□□ -0.84
HMGB1P10-201ENST00000395823 PCDHGA10Q9Y5H3 936 aa9.81□□□□□ -0.84
HMGB1P10-201ENST00000395823 KDM4FA0A1W2PPD8 638 aa9.8□□□□□ -0.84
HMGB1P10-201ENST00000395823 EPAS1Q99814 870 aa9.8□□□□□ -0.84
HMGB1P10-201ENST00000395823 TMUB1Q9BVT8 246 aa9.8□□□□□ -0.84
HMGB1P10-201ENST00000395823 TSR1Q2NL82 804 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms