RNA–Protein interactions for RNA: ENST00000395573.8

CNIH1-202, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 1 (best) BASIC

Gene CNIH1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-202ENST00000395573 ARHGEF40Q8TER5 1519 aa18.24■□□□□ 0.51
CNIH1-202ENST00000395573 FANCAO15360 1455 aa18.24■□□□□ 0.51
CNIH1-202ENST00000395573 HOXD11P31277 338 aaPredicted RBP18.21■□□□□ 0.51
CNIH1-202ENST00000395573 AKNAQ7Z591 1439 aa18.21■□□□□ 0.51
CNIH1-202ENST00000395573 DENND4BO75064 1496 aaPredicted RBP18.2■□□□□ 0.5
CNIH1-202ENST00000395573 MADDQ8WXG6 1647 aa18.2■□□□□ 0.5
CNIH1-202ENST00000395573 KIF14Q15058 1648 aa18.2■□□□□ 0.5
CNIH1-202ENST00000395573 ATP1B4Q9UN42 357 aaPredicted RBP18.19■□□□□ 0.5
CNIH1-202ENST00000395573 RIMS1Q86UR5 1692 aaKnown RBP18.18■□□□□ 0.5
CNIH1-202ENST00000395573 ZMYM4Q5VZL5 1548 aa18.18■□□□□ 0.5
CNIH1-202ENST00000395573 RNF216Q9NWF9 866 aaPredicted RBP18.18■□□□□ 0.5
CNIH1-202ENST00000395573 SIGLEC1Q9BZZ2 1709 aa18.16■□□□□ 0.5
CNIH1-202ENST00000395573 CDC42BPBQ9Y5S2 1711 aa18.15■□□□□ 0.5
CNIH1-202ENST00000395573 ZFYVE16Q7Z3T8 1539 aa18.14■□□□□ 0.49
CNIH1-202ENST00000395573 PCF11O94913 1555 aaKnown RBP18.14■□□□□ 0.49
CNIH1-202ENST00000395573 FER1L4A9Z1Z3 1794 aa18.14■□□□□ 0.49
CNIH1-202ENST00000395573 PTPRMP28827 1452 aa18.14■□□□□ 0.49
CNIH1-202ENST00000395573 ARID4BQ4LE39 1312 aaPredicted RBP18.13■□□□□ 0.49
CNIH1-202ENST00000395573 PLCH2O75038 1416 aa18.12■□□□□ 0.49
CNIH1-202ENST00000395573 CDK11AQ9UQ88 783 aaPredicted RBP18.11■□□□□ 0.49
CNIH1-202ENST00000395573 DCAF8L1A6NGE4 600 aa18.09■□□□□ 0.49
CNIH1-202ENST00000395573 CDC42BPAQ5VT25 1732 aa18.09■□□□□ 0.49
CNIH1-202ENST00000395573 PREX2Q70Z35 1606 aa18.09■□□□□ 0.49
CNIH1-202ENST00000395573 MAGI2Q86UL8 1455 aa18.08■□□□□ 0.49
CNIH1-202ENST00000395573 CLIP1P30622 1438 aa18.08■□□□□ 0.49
CNIH1-202ENST00000395573 TROQ12816 1431 aaPredicted RBP18.08■□□□□ 0.49
CNIH1-202ENST00000395573 POGZQ7Z3K3 1410 aa18.08■□□□□ 0.49
CNIH1-202ENST00000395573 ARHGAP5Q13017 1502 aa18.08■□□□□ 0.48
CNIH1-202ENST00000395573 SCAPERQ9BY12 1400 aa18.07■□□□□ 0.48
CNIH1-202ENST00000395573 YEATS2Q9ULM3 1422 aa18.07■□□□□ 0.48
CNIH1-202ENST00000395573 CCDC18Q5T9S5 1454 aa18.07■□□□□ 0.48
CNIH1-202ENST00000395573 ITSN2Q9NZM3 1697 aa18.04■□□□□ 0.48
CNIH1-202ENST00000395573 CASKIN1Q8WXD9 1431 aa18.04■□□□□ 0.48
CNIH1-202ENST00000395573 EFCAB2Q5VUJ9 269 aa18.03■□□□□ 0.48
CNIH1-202ENST00000395573 FYCO1Q9BQS8 1478 aa18.01■□□□□ 0.47
CNIH1-202ENST00000395573 KDM5CP41229 1560 aa18.01■□□□□ 0.47
CNIH1-202ENST00000395573 ZNF518AQ6AHZ1 1483 aa18.01■□□□□ 0.47
CNIH1-202ENST00000395573 ATP10AO60312 1499 aa17.99■□□□□ 0.47
CNIH1-202ENST00000395573 ABCA6Q8N139 1617 aa17.98■□□□□ 0.47
CNIH1-202ENST00000395573 ABCC1P33527 1531 aa17.98■□□□□ 0.47
CNIH1-202ENST00000395573 C9orf84Q5VXU9 1444 aa17.98■□□□□ 0.47
CNIH1-202ENST00000395573 ILDR1Q86SU0 546 aaPredicted RBP17.97■□□□□ 0.47
CNIH1-202ENST00000395573 DIP2CQ9Y2E4 1556 aa17.96■□□□□ 0.47
CNIH1-202ENST00000395573 LMTK3Q96Q04 1460 aa17.96■□□□□ 0.47
CNIH1-202ENST00000395573 ARHGEF12Q9NZN5 1544 aa17.95■□□□□ 0.46
CNIH1-202ENST00000395573 PREX1Q8TCU6 1659 aa17.95■□□□□ 0.46
CNIH1-202ENST00000395573 NPM3O75607 178 aaKnown RBP17.94■□□□□ 0.46
CNIH1-202ENST00000395573 MLECQ14165 292 aa17.94■□□□□ 0.46
CNIH1-202ENST00000395573 KIDINS220Q9ULH0 1771 aa17.93■□□□□ 0.46
CNIH1-202ENST00000395573 REREQ9P2R6 1566 aa17.92■□□□□ 0.46
CNIH1-202ENST00000395573 MYT1LQ9UL68 1186 aa17.91■□□□□ 0.46
CNIH1-202ENST00000395573 SETD1BQ9UPS6 1966 aaKnown RBP17.91■□□□□ 0.46
CNIH1-202ENST00000395573 AFAP1Q8N556 730 aa17.9■□□□□ 0.46
CNIH1-202ENST00000395573 SAMD9LQ8IVG5 1584 aa17.9■□□□□ 0.46
CNIH1-202ENST00000395573 MLH3Q9UHC1 1453 aa17.88■□□□□ 0.45
CNIH1-202ENST00000395573 C3P01024 1663 aa17.88■□□□□ 0.45
CNIH1-202ENST00000395573 KCNA4P22459 653 aa17.87■□□□□ 0.45
CNIH1-202ENST00000395573 TRAPPC8Q9Y2L5 1435 aa17.87■□□□□ 0.45
CNIH1-202ENST00000395573 SUPT6HQ7KZ85 1726 aaKnown RBP17.86■□□□□ 0.45
CNIH1-202ENST00000395573 SYCP2Q9BX26 1530 aa17.86■□□□□ 0.45
CNIH1-202ENST00000395573 AGLP35573 1532 aa17.82■□□□□ 0.44
CNIH1-202ENST00000395573 GPATCH8Q9UKJ3 1502 aaKnown RBP17.82■□□□□ 0.44
CNIH1-202ENST00000395573 HSPA2P54652 639 aa17.81■□□□□ 0.44
CNIH1-202ENST00000395573 ZNF777Q9ULD5 760 aaPredicted RBP17.81■□□□□ 0.44
CNIH1-202ENST00000395573 INO80Q9ULG1 1556 aaPredicted RBP17.8■□□□□ 0.44
CNIH1-202ENST00000395573 EHBP1L1Q8N3D4 1523 aa17.8■□□□□ 0.44
CNIH1-202ENST00000395573 MROH2AA6NES4 1674 aa17.8■□□□□ 0.44
CNIH1-202ENST00000395573 MTUS2Q5JR59 1369 aa17.79■□□□□ 0.44
CNIH1-202ENST00000395573 TIAM1Q13009 1591 aa17.79■□□□□ 0.44
CNIH1-202ENST00000395573 STRCQ7RTU9 1775 aa17.79■□□□□ 0.44
CNIH1-202ENST00000395573 ADGBQ8N7X0 1667 aa17.79■□□□□ 0.44
CNIH1-202ENST00000395573 CEP162Q5TB80 1403 aa17.79■□□□□ 0.44
CNIH1-202ENST00000395573 ATP7AQ04656 1500 aa17.78■□□□□ 0.44
CNIH1-202ENST00000395573 CCNB3Q8WWL7 1395 aa17.78■□□□□ 0.44
CNIH1-202ENST00000395573 PLEKHH2Q8IVE3 1493 aa17.77■□□□□ 0.44
CNIH1-202ENST00000395573 CEBPAP49715 358 aaPredicted RBP17.76■□□□□ 0.43
CNIH1-202ENST00000395573 CLTCQ00610 1675 aaKnown RBP17.76■□□□□ 0.43
CNIH1-202ENST00000395573 CFDP1Q9UEE9 299 aaPredicted RBP17.74■□□□□ 0.43
CNIH1-202ENST00000395573 UHRF1BP1Q6BDS2 1440 aa17.73■□□□□ 0.43
CNIH1-202ENST00000395573 KIAA1107Q9UPP5 1409 aa17.73■□□□□ 0.43
CNIH1-202ENST00000395573 HNRNPMP52272 730 aaKnown RBP eCLIP17.73■□□□□ 0.432e-8■■■■■ 32.7
CNIH1-202ENST00000395573 FBXO41Q8TF61 875 aa17.73■□□□□ 0.43
CNIH1-202ENST00000395573 ESF1Q9H501 851 aaKnown RBP17.73■□□□□ 0.43
CNIH1-202ENST00000395573 PLXNC1O60486 1568 aa17.73■□□□□ 0.43
CNIH1-202ENST00000395573 SPAG9O60271 1321 aaKnown RBP17.72■□□□□ 0.43
CNIH1-202ENST00000395573 CNTLNQ9NXG0 1405 aa17.7■□□□□ 0.42
CNIH1-202ENST00000395573 A2MP01023 1474 aa17.67■□□□□ 0.42
CNIH1-202ENST00000395573 ZNF142P52746 1687 aaPredicted RBP17.64■□□□□ 0.42
CNIH1-202ENST00000395573 NCOA2Q15596 1464 aa17.64■□□□□ 0.41
CNIH1-202ENST00000395573 ZNF644Q9H582 1327 aaPredicted RBP17.64■□□□□ 0.41
CNIH1-202ENST00000395573 MYO3AQ8NEV4 1616 aa17.64■□□□□ 0.41
CNIH1-202ENST00000395573 CAMSAP2Q08AD1 1489 aa17.63■□□□□ 0.41
CNIH1-202ENST00000395573 MBD5Q9P267 1494 aa17.63■□□□□ 0.41
CNIH1-202ENST00000395573 NPATQ14207 1427 aa17.6■□□□□ 0.41
CNIH1-202ENST00000395573 CCDC141Q6ZP82 1450 aa17.59■□□□□ 0.41
CNIH1-202ENST00000395573 RTEL1-TNFRSF6BF6WH68 1400 aa17.59■□□□□ 0.41
CNIH1-202ENST00000395573 VPS8Q8N3P4 1428 aa17.59■□□□□ 0.41
CNIH1-202ENST00000395573 CAMSAP1Q5T5Y3 1602 aa17.58■□□□□ 0.41
CNIH1-202ENST00000395573 ARHGEF5Q12774 1597 aa17.58■□□□□ 0.41
CNIH1-202ENST00000395573 ZMYM3Q14202 1370 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms