RNA–Protein interactions for RNA: ENST00000395472.2

SOCS4-202, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-202ENST00000395472 KIAA0556O60303 1618 aa12.79□□□□□ -0.36
SOCS4-202ENST00000395472 DISP1Q96F81 1524 aa12.78□□□□□ -0.36
SOCS4-202ENST00000395472 PBRM1Q86U86 1689 aa12.78□□□□□ -0.36
SOCS4-202ENST00000395472 CTTNBP2Q8WZ74 1663 aa12.77□□□□□ -0.36
SOCS4-202ENST00000395472 NUP155O75694 1391 aa12.77□□□□□ -0.37
SOCS4-202ENST00000395472 NUP153P49790 1475 aaKnown RBP12.76□□□□□ -0.37
SOCS4-202ENST00000395472 KANK1Q14678 1352 aa12.76□□□□□ -0.37
SOCS4-202ENST00000395472 PKD2Q13563 968 aa12.76□□□□□ -0.37
SOCS4-202ENST00000395472 SAMD9Q5K651 1589 aa12.74□□□□□ -0.37
SOCS4-202ENST00000395472 CHGAP10645 457 aaKnown RBP12.74□□□□□ -0.37
SOCS4-202ENST00000395472 HFM1A2PYH4 1435 aa12.73□□□□□ -0.37
SOCS4-202ENST00000395472 SUPT6HQ7KZ85 1726 aaKnown RBP12.72□□□□□ -0.37
SOCS4-202ENST00000395472 PLEKHH2Q8IVE3 1493 aa12.72□□□□□ -0.37
SOCS4-202ENST00000395472 CEP170Q5SW79 1584 aa12.72□□□□□ -0.37
SOCS4-202ENST00000395472 ANP32CO43423 234 aa12.71□□□□□ -0.37
SOCS4-202ENST00000395472 EIF4G2P78344 907 aaKnown RBP eCLIP12.71□□□□□ -0.38
SOCS4-202ENST00000395472 KDM2AQ9Y2K7 1162 aa12.71□□□□□ -0.38
SOCS4-202ENST00000395472 RAPGEF6Q8TEU7 1601 aa12.7□□□□□ -0.38
SOCS4-202ENST00000395472 KIF15Q9NS87 1388 aa12.7□□□□□ -0.38
SOCS4-202ENST00000395472 ATP10BO94823 1461 aa12.69□□□□□ -0.38
SOCS4-202ENST00000395472 STAG3Q9UJ98 1225 aa12.69□□□□□ -0.38
SOCS4-202ENST00000395472 ARHGAP5Q13017 1502 aa12.69□□□□□ -0.38
SOCS4-202ENST00000395472 ANKRD50Q9ULJ7 1429 aa12.69□□□□□ -0.38
SOCS4-202ENST00000395472 DAPK1P53355 1430 aa12.69□□□□□ -0.38
SOCS4-202ENST00000395472 KIF3BO15066 747 aa12.68□□□□□ -0.38
SOCS4-202ENST00000395472 FOXD1Q16676 465 aa12.67□□□□□ -0.38
SOCS4-202ENST00000395472 MIER1Q8N108 512 aa12.67□□□□□ -0.38
SOCS4-202ENST00000395472 ROCK1Q13464 1354 aa12.67□□□□□ -0.38
SOCS4-202ENST00000395472 PPP1R15AO75807 674 aaPredicted RBP12.67□□□□□ -0.38
SOCS4-202ENST00000395472 RGL3Q3MIN7 710 aa12.67□□□□□ -0.38
SOCS4-202ENST00000395472 ARHGEF11O15085 1522 aa12.66□□□□□ -0.38
SOCS4-202ENST00000395472 GGT6Q6P531 493 aa12.65□□□□□ -0.38
SOCS4-202ENST00000395472 FAM69CQ0P6D2 419 aa12.65□□□□□ -0.38
SOCS4-202ENST00000395472 C9orf84Q5VXU9 1444 aa12.65□□□□□ -0.39
SOCS4-202ENST00000395472 TRHP20396 242 aaPredicted RBP12.64□□□□□ -0.39
SOCS4-202ENST00000395472 NAIPQ13075 1403 aa12.64□□□□□ -0.39
SOCS4-202ENST00000395472 DDX10Q13206 875 aaKnown RBP12.64□□□□□ -0.39
SOCS4-202ENST00000395472 KIF14Q15058 1648 aa12.63□□□□□ -0.39
SOCS4-202ENST00000395472 GPATCH8Q9UKJ3 1502 aaKnown RBP12.63□□□□□ -0.39
SOCS4-202ENST00000395472 CAMSAP2Q08AD1 1489 aa12.63□□□□□ -0.39
SOCS4-202ENST00000395472 ABCC5O15440 1437 aa12.63□□□□□ -0.39
SOCS4-202ENST00000395472 AFAP1Q8N556 730 aa12.63□□□□□ -0.39
SOCS4-202ENST00000395472 ARID4BQ4LE39 1312 aaPredicted RBP12.62□□□□□ -0.39
SOCS4-202ENST00000395472 CFAP43Q8NDM7 1665 aa12.61□□□□□ -0.39
SOCS4-202ENST00000395472 ABCC2Q92887 1545 aa12.61□□□□□ -0.39
SOCS4-202ENST00000395472 L3MBTL2Q969R5 705 aa12.61□□□□□ -0.39
SOCS4-202ENST00000395472 PTPN23Q9H3S7 1636 aa12.61□□□□□ -0.39
SOCS4-202ENST00000395472 AKNAQ7Z591 1439 aa12.61□□□□□ -0.39
SOCS4-202ENST00000395472 DCAF11Q8TEB1 546 aa12.61□□□□□ -0.39
SOCS4-202ENST00000395472 CARD11Q9BXL7 1154 aa12.6□□□□□ -0.39
SOCS4-202ENST00000395472 DAXXQ9UER7 740 aaPredicted RBP12.6□□□□□ -0.39
SOCS4-202ENST00000395472 CCDC141Q6ZP82 1450 aa12.6□□□□□ -0.39
SOCS4-202ENST00000395472 TCOF1Q13428 1488 aaKnown RBP12.59□□□□□ -0.39
SOCS4-202ENST00000395472 FKBP8Q14318 412 aa12.59□□□□□ -0.39
SOCS4-202ENST00000395472 HIRIP3Q9BW71 556 aaPredicted RBP12.59□□□□□ -0.39
SOCS4-202ENST00000395472 SCAPERQ9BY12 1400 aa12.58□□□□□ -0.4
SOCS4-202ENST00000395472 PLCH2O75038 1416 aa12.56□□□□□ -0.4
SOCS4-202ENST00000395472 CCDC144AA2RUR9 1427 aa12.56□□□□□ -0.4
SOCS4-202ENST00000395472 WASHC2CQ9Y4E1 1318 aa12.56□□□□□ -0.4
SOCS4-202ENST00000395472 NCOA1Q15788 1441 aa12.56□□□□□ -0.4
SOCS4-202ENST00000395472 CD109Q6YHK3 1445 aa12.55□□□□□ -0.4
SOCS4-202ENST00000395472 RTL5Q5HYW3 569 aaPredicted RBP12.55□□□□□ -0.4
SOCS4-202ENST00000395472 PTPRKQ15262 1439 aa12.55□□□□□ -0.4
SOCS4-202ENST00000395472 ASXL2Q76L83 1435 aa12.54□□□□□ -0.4
SOCS4-202ENST00000395472 WDR7Q9Y4E6 1490 aa12.54□□□□□ -0.4
SOCS4-202ENST00000395472 MLECQ14165 292 aa12.53□□□□□ -0.4
SOCS4-202ENST00000395472 KIAA1107Q9UPP5 1409 aa12.53□□□□□ -0.4
SOCS4-202ENST00000395472 ABCA8O94911 1581 aa12.53□□□□□ -0.4
SOCS4-202ENST00000395472 UHRF1BP1LA0JNW5 1464 aa12.53□□□□□ -0.4
SOCS4-202ENST00000395472 HSPA5P11021 654 aaKnown RBP12.52□□□□□ -0.41
SOCS4-202ENST00000395472 ADGRL1O94910 1474 aa12.51□□□□□ -0.41
SOCS4-202ENST00000395472 PLPPR3Q6T4P5 718 aa12.51□□□□□ -0.41
SOCS4-202ENST00000395472 MAGI3Q5TCQ9 1506 aa12.51□□□□□ -0.41
SOCS4-202ENST00000395472 CDCA8Q53HL2 280 aa12.51□□□□□ -0.41
SOCS4-202ENST00000395472 FANCAO15360 1455 aa12.49□□□□□ -0.41
SOCS4-202ENST00000395472 KDM5BQ9UGL1 1544 aa12.48□□□□□ -0.41
SOCS4-202ENST00000395472 SLC24A1O60721 1099 aa12.47□□□□□ -0.41
SOCS4-202ENST00000395472 STAC3Q96MF2 364 aa12.47□□□□□ -0.41
SOCS4-202ENST00000395472 RAPGEF3O95398 923 aa12.46□□□□□ -0.41
SOCS4-202ENST00000395472 SHANK2Q9UPX8 1470 aa12.46□□□□□ -0.41
SOCS4-202ENST00000395472 HDGFP51858 240 aaKnown RBP12.46□□□□□ -0.42
SOCS4-202ENST00000395472 ABCC10Q5T3U5 1492 aa12.45□□□□□ -0.42
SOCS4-202ENST00000395472 CHD1O14646 1710 aa12.45□□□□□ -0.42
SOCS4-202ENST00000395472 ROCK2O75116 1388 aaKnown RBP12.45□□□□□ -0.42
SOCS4-202ENST00000395472 ITSN2Q9NZM3 1697 aa12.45□□□□□ -0.42
SOCS4-202ENST00000395472 DENND4BO75064 1496 aaPredicted RBP12.43□□□□□ -0.42
SOCS4-202ENST00000395472 TMF1P82094 1093 aa12.42□□□□□ -0.42
SOCS4-202ENST00000395472 ANKRD30BQ9BXX2 1392 aa12.42□□□□□ -0.42
SOCS4-202ENST00000395472 CLASP1Q7Z460 1538 aa12.42□□□□□ -0.42
SOCS4-202ENST00000395472 HNRNPUQ00839 825 aaKnown RBP eCLIP12.42□□□□□ -0.42
SOCS4-202ENST00000395472 SYCP2Q9BX26 1530 aa12.41□□□□□ -0.42
SOCS4-202ENST00000395472 DHX29Q7Z478 1369 aaKnown RBP12.41□□□□□ -0.42
SOCS4-202ENST00000395472 TRAPPC8Q9Y2L5 1435 aa12.4□□□□□ -0.42
SOCS4-202ENST00000395472 ADGRL2O95490 1459 aa12.4□□□□□ -0.42
SOCS4-202ENST00000395472 ERCC6L2Q5T890 1561 aa12.4□□□□□ -0.42
SOCS4-202ENST00000395472 MRS2Q9HD23 443 aa12.39□□□□□ -0.43
SOCS4-202ENST00000395472 EIF3AQ14152 1382 aaKnown RBP12.38□□□□□ -0.43
SOCS4-202ENST00000395472 RTEL1-TNFRSF6BF6WH68 1400 aa12.38□□□□□ -0.43
SOCS4-202ENST00000395472 ERBINQ96RT1 1412 aa12.37□□□□□ -0.43
SOCS4-202ENST00000395472 DNMT1P26358 1616 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms