RNA–Protein interactions for RNA: ENST00000394921.8

PMS2P3-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 2

Gene PMS2P3, Length 1,316 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-201ENST00000394921 ARHGAP5Q13017 1502 aa37.13■■■■□ 3.53
PMS2P3-201ENST00000394921 ADAMTSL3P82987 1691 aa37.11■■■■□ 3.53
PMS2P3-201ENST00000394921 CDC42BPBQ9Y5S2 1711 aa37.11■■■■□ 3.53
PMS2P3-201ENST00000394921 CEP162Q5TB80 1403 aa37.11■■■■□ 3.53
PMS2P3-201ENST00000394921 MAGI2Q86UL8 1455 aa37.1■■■■□ 3.53
PMS2P3-201ENST00000394921 YEATS2Q9ULM3 1422 aa37.09■■■■□ 3.53
PMS2P3-201ENST00000394921 ZFYVE16Q7Z3T8 1539 aa37.09■■■■□ 3.53
PMS2P3-201ENST00000394921 BCORL1Q5H9F3 1711 aa37.08■■■■□ 3.53
PMS2P3-201ENST00000394921 PREX2Q70Z35 1606 aa37.07■■■■□ 3.52
PMS2P3-201ENST00000394921 ARID4BQ4LE39 1312 aaPredicted RBP37.02■■■■□ 3.52
PMS2P3-201ENST00000394921 CDC42BPAQ5VT25 1732 aa37.01■■■■□ 3.51
PMS2P3-201ENST00000394921 SIGLEC1Q9BZZ2 1709 aa37.01■■■■□ 3.51
PMS2P3-201ENST00000394921 ZNF518AQ6AHZ1 1483 aa36.97■■■■□ 3.51
PMS2P3-201ENST00000394921 MADDQ8WXG6 1647 aa36.96■■■■□ 3.51
PMS2P3-201ENST00000394921 KDM5CP41229 1560 aa36.95■■■■□ 3.51
PMS2P3-201ENST00000394921 LOC105371045A0A1W2PR82 267 aa36.95■■■■□ 3.51
PMS2P3-201ENST00000394921 PTPRMP28827 1452 aa36.95■■■■□ 3.51
PMS2P3-201ENST00000394921 ABCC1P33527 1531 aa36.94■■■■□ 3.5
PMS2P3-201ENST00000394921 AFAP1Q8N556 730 aa36.93■■■■□ 3.5
PMS2P3-201ENST00000394921 ARHGEF12Q9NZN5 1544 aa36.92■■■■□ 3.5
PMS2P3-201ENST00000394921 HECW2Q9P2P5 1572 aa36.92■■■■□ 3.5
PMS2P3-201ENST00000394921 GPATCH8Q9UKJ3 1502 aaKnown RBP36.9■■■■□ 3.5
PMS2P3-201ENST00000394921 ATP10AO60312 1499 aa36.89■■■■□ 3.5
PMS2P3-201ENST00000394921 ITSN2Q9NZM3 1697 aa36.88■■■■□ 3.49
PMS2P3-201ENST00000394921 TRAPPC8Q9Y2L5 1435 aa36.87■■■■□ 3.49
PMS2P3-201ENST00000394921 MTUS2Q5JR59 1369 aa36.86■■■■□ 3.49
PMS2P3-201ENST00000394921 C9orf84Q5VXU9 1444 aa36.85■■■■□ 3.49
PMS2P3-201ENST00000394921 RIMS1Q86UR5 1692 aaKnown RBP36.82■■■■□ 3.49
PMS2P3-201ENST00000394921 SAMD9LQ8IVG5 1584 aa36.81■■■■□ 3.48
PMS2P3-201ENST00000394921 MLH3Q9UHC1 1453 aa36.81■■■■□ 3.48
PMS2P3-201ENST00000394921 DIP2CQ9Y2E4 1556 aa36.79■■■■□ 3.48
PMS2P3-201ENST00000394921 EHBP1L1Q8N3D4 1523 aa36.79■■■■□ 3.48
PMS2P3-201ENST00000394921 CCNB3Q8WWL7 1395 aa36.76■■■■□ 3.48
PMS2P3-201ENST00000394921 ZNF777Q9ULD5 760 aaPredicted RBP36.76■■■■□ 3.47
PMS2P3-201ENST00000394921 ABCA6Q8N139 1617 aa36.75■■■■□ 3.47
PMS2P3-201ENST00000394921 MLECQ14165 292 aa36.74■■■■□ 3.47
PMS2P3-201ENST00000394921 SYCP2Q9BX26 1530 aa36.73■■■■□ 3.47
PMS2P3-201ENST00000394921 MYT1LQ9UL68 1186 aa36.72■■■■□ 3.47
PMS2P3-201ENST00000394921 TIAM1Q13009 1591 aa36.71■■■■□ 3.47
PMS2P3-201ENST00000394921 REREQ9P2R6 1566 aa36.71■■■■□ 3.47
PMS2P3-201ENST00000394921 CFDP1Q9UEE9 299 aaPredicted RBP36.71■■■■□ 3.47
PMS2P3-201ENST00000394921 VPS8Q8N3P4 1428 aa36.7■■■■□ 3.47
PMS2P3-201ENST00000394921 KIDINS220Q9ULH0 1771 aa36.7■■■■□ 3.47
PMS2P3-201ENST00000394921 FER1L4A9Z1Z3 1794 aa36.7■■■■□ 3.46
PMS2P3-201ENST00000394921 KIAA1107Q9UPP5 1409 aa36.67■■■■□ 3.46
PMS2P3-201ENST00000394921 HNRNPMP52272 730 aaKnown RBP eCLIP36.65■■■■□ 3.465e-7■■□□□ 13.4
PMS2P3-201ENST00000394921 PLEKHH2Q8IVE3 1493 aa36.65■■■■□ 3.46
PMS2P3-201ENST00000394921 AGLP35573 1532 aa36.59■■■■□ 3.45
PMS2P3-201ENST00000394921 NCOA2Q15596 1464 aa36.58■■■■□ 3.45
PMS2P3-201ENST00000394921 SUPT6HQ7KZ85 1726 aaKnown RBP36.58■■■■□ 3.45
PMS2P3-201ENST00000394921 ZNF644Q9H582 1327 aaPredicted RBP36.57■■■■□ 3.44
PMS2P3-201ENST00000394921 LMTK3Q96Q04 1460 aa36.56■■■■□ 3.44
PMS2P3-201ENST00000394921 SPAG9O60271 1321 aaKnown RBP36.56■■■■□ 3.44
PMS2P3-201ENST00000394921 PLPPR3Q6T4P5 718 aa36.55■■■■□ 3.44
PMS2P3-201ENST00000394921 INO80Q9ULG1 1556 aaPredicted RBP36.53■■■■□ 3.44
PMS2P3-201ENST00000394921 ATP7AQ04656 1500 aa36.52■■■■□ 3.44
PMS2P3-201ENST00000394921 MBD5Q9P267 1494 aa36.51■■■■□ 3.43
PMS2P3-201ENST00000394921 LRRC9Q6ZRR7 1453 aa36.5■■■■□ 3.43
PMS2P3-201ENST00000394921 MAP3K1Q13233 1512 aa36.47■■■■□ 3.43
PMS2P3-201ENST00000394921 CEBPAP49715 358 aaPredicted RBP36.42■■■■□ 3.42
PMS2P3-201ENST00000394921 KANK4Q5T7N3 995 aaPredicted RBP36.4■■■■□ 3.42
PMS2P3-201ENST00000394921 PLXNC1O60486 1568 aa36.4■■■■□ 3.42
PMS2P3-201ENST00000394921 CAMSAP2Q08AD1 1489 aa36.4■■■■□ 3.42
PMS2P3-201ENST00000394921 A2MP01023 1474 aa36.37■■■■□ 3.41
PMS2P3-201ENST00000394921 C3P01024 1663 aa36.34■■■■□ 3.41
PMS2P3-201ENST00000394921 HSPA2P54652 639 aa36.34■■■■□ 3.41
PMS2P3-201ENST00000394921 RTEL1-TNFRSF6BF6WH68 1400 aa36.33■■■■□ 3.41
PMS2P3-201ENST00000394921 ADGBQ8N7X0 1667 aa36.33■■■■□ 3.41
PMS2P3-201ENST00000394921 CCDC141Q6ZP82 1450 aa36.32■■■■□ 3.4
PMS2P3-201ENST00000394921 PREX1Q8TCU6 1659 aa36.31■■■■□ 3.4
PMS2P3-201ENST00000394921 CNTLNQ9NXG0 1405 aa36.29■■■■□ 3.4
PMS2P3-201ENST00000394921 SETD1BQ9UPS6 1966 aaKnown RBP36.28■■■■□ 3.4
PMS2P3-201ENST00000394921 ESF1Q9H501 851 aaKnown RBP36.28■■■■□ 3.4
PMS2P3-201ENST00000394921 ARHGEF5Q12774 1597 aa36.26■■■■□ 3.4
PMS2P3-201ENST00000394921 RSPH4AQ5TD94 716 aa36.25■■■■□ 3.39
PMS2P3-201ENST00000394921 MROH2AA6NES4 1674 aa36.22■■■■□ 3.39
PMS2P3-201ENST00000394921 MYOM3Q5VTT5 1437 aa36.2■■■■□ 3.39
PMS2P3-201ENST00000394921 DHX29Q7Z478 1369 aaKnown RBP36.19■■■■□ 3.38
PMS2P3-201ENST00000394921 MIA2Q96PC5 1412 aa36.18■■■■□ 3.38
PMS2P3-201ENST00000394921 UHRF1BP1Q6BDS2 1440 aa36.17■■■■□ 3.38
PMS2P3-201ENST00000394921 CLTCQ00610 1675 aaKnown RBP36.16■■■■□ 3.38
PMS2P3-201ENST00000394921 GGT6Q6P531 493 aa36.15■■■■□ 3.38
PMS2P3-201ENST00000394921 ZMYM3Q14202 1370 aa36.15■■■■□ 3.38
PMS2P3-201ENST00000394921 APLP2Q06481 763 aa36.13■■■■□ 3.37
PMS2P3-201ENST00000394921 ILDR1Q86SU0 546 aaPredicted RBP36.12■■■■□ 3.37
PMS2P3-201ENST00000394921 TSPY4P0CV99 314 aa36.09■■■■□ 3.37
PMS2P3-201ENST00000394921 TSPY10P0CW01 314 aa36.09■■■■□ 3.37
PMS2P3-201ENST00000394921 MAST1Q9Y2H9 1570 aa36.09■■■■□ 3.37
PMS2P3-201ENST00000394921 PPP6R1Q9UPN7 881 aa36.08■■■■□ 3.37
PMS2P3-201ENST00000394921 NPATQ14207 1427 aa36.07■■■■□ 3.37
PMS2P3-201ENST00000394921 KIF3BO15066 747 aa36.03■■■■□ 3.36
PMS2P3-201ENST00000394921 STRCQ7RTU9 1775 aa36.03■■■■□ 3.36
PMS2P3-201ENST00000394921 PTPRKQ15262 1439 aa36■■■■□ 3.35
PMS2P3-201ENST00000394921 PTPN23Q9H3S7 1636 aa35.99■■■■□ 3.35
PMS2P3-201ENST00000394921 FGD6Q6ZV73 1430 aa35.94■■■■□ 3.34
PMS2P3-201ENST00000394921 FAM135AQ9P2D6 1515 aa35.93■■■■□ 3.34
PMS2P3-201ENST00000394921 TCOF1Q13428 1488 aaKnown RBP35.92■■■■□ 3.34
PMS2P3-201ENST00000394921 KDM5DQ9BY66 1539 aa35.91■■■■□ 3.34
PMS2P3-201ENST00000394921 ABCC5O15440 1437 aa35.91■■■■□ 3.34
PMS2P3-201ENST00000394921 CROCC2H7BZ55 1655 aa35.91■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms