RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 PAIP2Q9BPZ3 127 aaKnown RBP11.34□□□□□ -0.59
CHD2-201ENST00000394196 CDR1P51861 262 aa11.33□□□□□ -0.6
CHD2-201ENST00000394196 ARGLU1Q9NWB6 273 aaPredicted RBP11.32□□□□□ -0.6
CHD2-201ENST00000394196 ZRSR2Q15696 482 aaKnown RBP11.31□□□□□ -0.6
CHD2-201ENST00000394196 IPO9Q96P70 1041 aaKnown RBP11.31□□□□□ -0.6
CHD2-201ENST00000394196 CCER2I3L3R5 266 aa11.31□□□□□ -0.6
CHD2-201ENST00000394196 FGD1P98174 961 aa11.31□□□□□ -0.6
CHD2-201ENST00000394196 CAGE1Q8TC20 777 aa11.3□□□□□ -0.6
CHD2-201ENST00000394196 DDX11L8A8MPP1 907 aa11.3□□□□□ -0.6
CHD2-201ENST00000394196 RBM28Q9NW13 759 aaKnown RBP11.3□□□□□ -0.6
CHD2-201ENST00000394196 ZBTB7CA1YPR0 619 aa11.29□□□□□ -0.6
CHD2-201ENST00000394196 SKOR2Q2VWA4 1001 aaPredicted RBP11.29□□□□□ -0.6
CHD2-201ENST00000394196 IRX3P78415 501 aaPredicted RBP11.29□□□□□ -0.6
CHD2-201ENST00000394196 TMX4Q9H1E5 349 aaPredicted RBP11.28□□□□□ -0.6
CHD2-201ENST00000394196 CLSTN1O94985 981 aa11.28□□□□□ -0.6
CHD2-201ENST00000394196 GOLGA6L10A6NI86 522 aa11.27□□□□□ -0.61
CHD2-201ENST00000394196 CLGNO14967 610 aa11.27□□□□□ -0.61
CHD2-201ENST00000394196 KCNJ4P48050 445 aa11.26□□□□□ -0.61
CHD2-201ENST00000394196 FBXO3Q9UK99 471 aa11.26□□□□□ -0.61
CHD2-201ENST00000394196 H0YHG0 523 aa11.26□□□□□ -0.61
CHD2-201ENST00000394196 LMOD2Q6P5Q4 547 aa11.26□□□□□ -0.61
CHD2-201ENST00000394196 AK7Q96M32 723 aa11.26□□□□□ -0.61
CHD2-201ENST00000394196 TMCO5BA8MYB1 307 aa11.26□□□□□ -0.61
CHD2-201ENST00000394196 HMGN5P82970 282 aaKnown RBP11.25□□□□□ -0.61
CHD2-201ENST00000394196 RGS3P49796 1198 aa11.25□□□□□ -0.61
CHD2-201ENST00000394196 GOLGA6L7A0A1B0GV03 622 aa11.25□□□□□ -0.61
CHD2-201ENST00000394196 KNSTRNQ9Y448 316 aa11.25□□□□□ -0.61
CHD2-201ENST00000394196 ARID3AQ99856 593 aa11.25□□□□□ -0.61
CHD2-201ENST00000394196 TIMELESSQ9UNS1 1208 aa11.24□□□□□ -0.61
CHD2-201ENST00000394196 GSE1Q14687 1217 aa11.24□□□□□ -0.61
CHD2-201ENST00000394196 ESF1Q9H501 851 aaKnown RBP11.24□□□□□ -0.61
CHD2-201ENST00000394196 TPRNQ4KMQ1 711 aa11.24□□□□□ -0.61
CHD2-201ENST00000394196 PLCD4Q9BRC7 762 aa11.24□□□□□ -0.61
CHD2-201ENST00000394196 HSP90B2PQ58FF3 399 aa11.24□□□□□ -0.61
CHD2-201ENST00000394196 STAG3Q9UJ98 1225 aa11.24□□□□□ -0.61
CHD2-201ENST00000394196 NUDCQ9Y266 331 aa11.23□□□□□ -0.61
CHD2-201ENST00000394196 TPM3P06753 285 aa11.22□□□□□ -0.61
CHD2-201ENST00000394196 LEKR1Q6ZMV7 388 aa11.22□□□□□ -0.61
CHD2-201ENST00000394196 GIMAP7Q8NHV1 300 aa11.22□□□□□ -0.61
CHD2-201ENST00000394196 FAM43AQ8N2R8 423 aa11.22□□□□□ -0.61
CHD2-201ENST00000394196 B4GALNT3Q6L9W6 998 aa11.22□□□□□ -0.61
CHD2-201ENST00000394196 DIAPH3Q9NSV4 1193 aa11.21□□□□□ -0.61
CHD2-201ENST00000394196 MNS1Q8NEH6 495 aa11.21□□□□□ -0.61
CHD2-201ENST00000394196 CHMP4CQ96CF2 233 aa11.21□□□□□ -0.62
CHD2-201ENST00000394196 MAPK8IP3Q9UPT6 1336 aa11.2□□□□□ -0.62
CHD2-201ENST00000394196 GOLGA6L19H0YKK7 550 aa11.2□□□□□ -0.62
CHD2-201ENST00000394196 FAM107BQ9H098 131 aa11.2□□□□□ -0.62
CHD2-201ENST00000394196 FAM13BQ9NYF5 915 aa11.2□□□□□ -0.62
CHD2-201ENST00000394196 ERCC4Q92889 916 aaPredicted RBP11.2□□□□□ -0.62
CHD2-201ENST00000394196 FYB1O15117 783 aa11.19□□□□□ -0.62
CHD2-201ENST00000394196 KIAA1211Q6ZU35 1233 aa11.19□□□□□ -0.62
CHD2-201ENST00000394196 DNAJC2Q99543 621 aaKnown RBP11.19□□□□□ -0.62
CHD2-201ENST00000394196 CTR9Q6PD62 1173 aa11.18□□□□□ -0.62
CHD2-201ENST00000394196 GNL2Q13823 731 aaKnown RBP11.18□□□□□ -0.62
CHD2-201ENST00000394196 KIF3AQ9Y496 699 aa11.18□□□□□ -0.62
CHD2-201ENST00000394196 PMFBP1Q8TBY8 1022 aa11.18□□□□□ -0.62
CHD2-201ENST00000394196 HSP90AB3PQ58FF7 597 aa11.17□□□□□ -0.62
CHD2-201ENST00000394196 CAVIN1Q6NZI2 390 aaKnown RBP11.17□□□□□ -0.62
CHD2-201ENST00000394196 IPO8O15397 1037 aaKnown RBP11.17□□□□□ -0.62
CHD2-201ENST00000394196 ZNF777Q9ULD5 760 aaPredicted RBP11.17□□□□□ -0.62
CHD2-201ENST00000394196 FANCIQ9NVI1 1328 aa11.17□□□□□ -0.62
CHD2-201ENST00000394196 TSPY4P0CV99 314 aa11.17□□□□□ -0.62
CHD2-201ENST00000394196 TSPY10P0CW01 314 aa11.17□□□□□ -0.62
CHD2-201ENST00000394196 EEA1Q15075 1411 aa11.17□□□□□ -0.62
CHD2-201ENST00000394196 RSF1Q96T23 1441 aaPredicted RBP11.17□□□□□ -0.62
CHD2-201ENST00000394196 KIF16BQ96L93 1317 aa11.17□□□□□ -0.62
CHD2-201ENST00000394196 CALCOCO1Q9P1Z2 691 aa11.17□□□□□ -0.62
CHD2-201ENST00000394196 ATP6V1DQ9Y5K8 247 aa11.17□□□□□ -0.62
CHD2-201ENST00000394196 OS9Q13438 667 aaPredicted RBP11.16□□□□□ -0.62
CHD2-201ENST00000394196 DDX11Q96FC9 970 aa11.16□□□□□ -0.62
CHD2-201ENST00000394196 CHMP4AQ9BY43 222 aa11.16□□□□□ -0.62
CHD2-201ENST00000394196 SWAP70Q9UH65 585 aa11.15□□□□□ -0.62
CHD2-201ENST00000394196 TSR1Q2NL82 804 aaKnown RBP11.15□□□□□ -0.62
CHD2-201ENST00000394196 PDCL2Q8N4E4 241 aa11.15□□□□□ -0.62
CHD2-201ENST00000394196 RWDD1Q9H446 243 aaPredicted RBP11.15□□□□□ -0.62
CHD2-201ENST00000394196 BCCIPQ9P287 314 aaKnown RBP eCLIP11.15□□□□□ -0.62
CHD2-201ENST00000394196 GOLGA6L10A0A0M3HER8 536 aa11.15□□□□□ -0.62
CHD2-201ENST00000394196 GZF1Q9H116 711 aaPredicted RBP11.15□□□□□ -0.62
CHD2-201ENST00000394196 TSHZ2Q9NRE2 1034 aa11.14□□□□□ -0.63
CHD2-201ENST00000394196 KIAA0754O94854 1291 aa11.14□□□□□ -0.63
CHD2-201ENST00000394196 TPM1P09493 284 aa11.14□□□□□ -0.63
CHD2-201ENST00000394196 CHGAP10645 457 aaKnown RBP11.14□□□□□ -0.63
CHD2-201ENST00000394196 CEP89Q96ST8 783 aa11.14□□□□□ -0.63
CHD2-201ENST00000394196 RUFY1Q96T51 708 aa11.14□□□□□ -0.63
CHD2-201ENST00000394196 MTUS2Q5JR59 1369 aa11.13□□□□□ -0.63
CHD2-201ENST00000394196 SUDS3Q9H7L9 328 aaPredicted RBP11.13□□□□□ -0.63
CHD2-201ENST00000394196 ST18O60284 1047 aa11.12□□□□□ -0.63
CHD2-201ENST00000394196 SPATA24Q86W54 205 aa11.12□□□□□ -0.63
CHD2-201ENST00000394196 DHX8Q14562 1220 aaKnown RBP11.12□□□□□ -0.63
CHD2-201ENST00000394196 NAP1L2Q9ULW6 460 aaPredicted RBP11.11□□□□□ -0.63
CHD2-201ENST00000394196 FRAT1Q92837 279 aaPredicted RBP11.11□□□□□ -0.63
CHD2-201ENST00000394196 MRVI1Q9Y6F6 885 aa11.11□□□□□ -0.63
CHD2-201ENST00000394196 POLR3GO15318 223 aaPredicted RBP11.11□□□□□ -0.63
CHD2-201ENST00000394196 RSPH4AQ5TD94 716 aa11.11□□□□□ -0.63
CHD2-201ENST00000394196 HDAC5Q9UQL6 1122 aa11.11□□□□□ -0.63
CHD2-201ENST00000394196 ISY1Q9ULR0 285 aaKnown RBP11.1□□□□□ -0.63
CHD2-201ENST00000394196 BBXQ8WY36 941 aaPredicted RBP11.1□□□□□ -0.63
CHD2-201ENST00000394196 MPHOSPH10O00566 681 aaKnown RBP11.1□□□□□ -0.63
CHD2-201ENST00000394196 LIG1P18858 919 aa11.1□□□□□ -0.63
CHD2-201ENST00000394196 PHLDB1Q86UU1 1377 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms