RNA–Protein interactions for RNA: ENST00000394011.7

RALGPS1-206, Transcript of Ral GEF with PH domain and SH3 binding motif 1, humanhuman

TSL 1 (best) BASIC

Gene RALGPS1, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGPS1-206ENST00000394011 POGZQ7Z3K3 1410 aa32.03■■■□□ 2.72
RALGPS1-206ENST00000394011 CASKIN1Q8WXD9 1431 aa32.03■■■□□ 2.72
RALGPS1-206ENST00000394011 SCAPERQ9BY12 1400 aa32.03■■■□□ 2.72
RALGPS1-206ENST00000394011 CDK11AQ9UQ88 783 aaPredicted RBP32.03■■■□□ 2.72
RALGPS1-206ENST00000394011 ZFYVE16Q7Z3T8 1539 aa32.01■■■□□ 2.72
RALGPS1-206ENST00000394011 MAGI2Q86UL8 1455 aa32.01■■■□□ 2.71
RALGPS1-206ENST00000394011 ARID4BQ4LE39 1312 aaPredicted RBP31.96■■■□□ 2.71
RALGPS1-206ENST00000394011 CDC42BPBQ9Y5S2 1711 aa31.95■■■□□ 2.71
RALGPS1-206ENST00000394011 CLIP1P30622 1438 aa31.95■■■□□ 2.71
RALGPS1-206ENST00000394011 EFCAB2Q5VUJ9 269 aa31.95■■■□□ 2.71
RALGPS1-206ENST00000394011 CCDC18Q5T9S5 1454 aa31.95■■■□□ 2.7
RALGPS1-206ENST00000394011 RIMS1Q86UR5 1692 aaKnown RBP31.92■■■□□ 2.7
RALGPS1-206ENST00000394011 ARHGAP5Q13017 1502 aa31.9■■■□□ 2.7
RALGPS1-206ENST00000394011 FYCO1Q9BQS8 1478 aa31.9■■■□□ 2.7
RALGPS1-206ENST00000394011 KDM5CP41229 1560 aa31.88■■■□□ 2.69
RALGPS1-206ENST00000394011 PREX2Q70Z35 1606 aa31.88■■■□□ 2.69
RALGPS1-206ENST00000394011 ZNF518AQ6AHZ1 1483 aa31.84■■■□□ 2.69
RALGPS1-206ENST00000394011 ATP10AO60312 1499 aa31.83■■■□□ 2.69
RALGPS1-206ENST00000394011 CDC42BPAQ5VT25 1732 aa31.83■■■□□ 2.69
RALGPS1-206ENST00000394011 ARHGEF12Q9NZN5 1544 aa31.8■■■□□ 2.68
RALGPS1-206ENST00000394011 C9orf84Q5VXU9 1444 aa31.79■■■□□ 2.68
RALGPS1-206ENST00000394011 AFAP1Q8N556 730 aa31.79■■■□□ 2.68
RALGPS1-206ENST00000394011 ABCC1P33527 1531 aa31.79■■■□□ 2.68
RALGPS1-206ENST00000394011 LMTK3Q96Q04 1460 aa31.78■■■□□ 2.68
RALGPS1-206ENST00000394011 FER1L4A9Z1Z3 1794 aa31.77■■■□□ 2.68
RALGPS1-206ENST00000394011 ITSN2Q9NZM3 1697 aa31.76■■■□□ 2.67
RALGPS1-206ENST00000394011 DIP2CQ9Y2E4 1556 aa31.74■■■□□ 2.67
RALGPS1-206ENST00000394011 TRAPPC8Q9Y2L5 1435 aa31.73■■■□□ 2.67
RALGPS1-206ENST00000394011 MLH3Q9UHC1 1453 aa31.72■■■□□ 2.67
RALGPS1-206ENST00000394011 ABCA6Q8N139 1617 aa31.71■■■□□ 2.67
RALGPS1-206ENST00000394011 REREQ9P2R6 1566 aa31.7■■■□□ 2.67
RALGPS1-206ENST00000394011 MLECQ14165 292 aa31.7■■■□□ 2.67
RALGPS1-206ENST00000394011 GPATCH8Q9UKJ3 1502 aaKnown RBP31.67■■■□□ 2.66
RALGPS1-206ENST00000394011 SAMD9LQ8IVG5 1584 aa31.66■■■□□ 2.66
RALGPS1-206ENST00000394011 KIDINS220Q9ULH0 1771 aa31.65■■■□□ 2.66
RALGPS1-206ENST00000394011 CEP162Q5TB80 1403 aa31.58■■■□□ 2.65
RALGPS1-206ENST00000394011 PLPPR3Q6T4P5 718 aa31.57■■■□□ 2.64
RALGPS1-206ENST00000394011 AGLP35573 1532 aa31.57■■■□□ 2.64
RALGPS1-206ENST00000394011 SYCP2Q9BX26 1530 aa31.56■■■□□ 2.64
RALGPS1-206ENST00000394011 HSPA2P54652 639 aa31.52■■■□□ 2.64
RALGPS1-206ENST00000394011 MYT1LQ9UL68 1186 aa31.52■■■□□ 2.64
RALGPS1-206ENST00000394011 ZNF777Q9ULD5 760 aaPredicted RBP31.5■■■□□ 2.63
RALGPS1-206ENST00000394011 MTUS2Q5JR59 1369 aa31.5■■■□□ 2.63
RALGPS1-206ENST00000394011 KIAA1107Q9UPP5 1409 aa31.49■■■□□ 2.63
RALGPS1-206ENST00000394011 TIAM1Q13009 1591 aa31.49■■■□□ 2.63
RALGPS1-206ENST00000394011 CEBPAP49715 358 aaPredicted RBP31.49■■■□□ 2.63
RALGPS1-206ENST00000394011 PREX1Q8TCU6 1659 aa31.48■■■□□ 2.63
RALGPS1-206ENST00000394011 EHBP1L1Q8N3D4 1523 aa31.48■■■□□ 2.63
RALGPS1-206ENST00000394011 CCNB3Q8WWL7 1395 aa31.47■■■□□ 2.63
RALGPS1-206ENST00000394011 HNRNPMP52272 730 aaKnown RBP eCLIP31.47■■■□□ 2.639e-6■■■■□ 22.2
RALGPS1-206ENST00000394011 C3P01024 1663 aa31.45■■■□□ 2.63
RALGPS1-206ENST00000394011 INO80Q9ULG1 1556 aaPredicted RBP31.45■■■□□ 2.63
RALGPS1-206ENST00000394011 CFDP1Q9UEE9 299 aaPredicted RBP31.44■■■□□ 2.62
RALGPS1-206ENST00000394011 PLEKHH2Q8IVE3 1493 aa31.44■■■□□ 2.62
RALGPS1-206ENST00000394011 ATP7AQ04656 1500 aa31.41■■■□□ 2.62
RALGPS1-206ENST00000394011 LOC105371045A0A1W2PR82 267 aa31.4■■■□□ 2.62
RALGPS1-206ENST00000394011 SPAG9O60271 1321 aaKnown RBP31.39■■■□□ 2.62
RALGPS1-206ENST00000394011 SETD1BQ9UPS6 1966 aaKnown RBP31.39■■■□□ 2.62
RALGPS1-206ENST00000394011 PLXNC1O60486 1568 aa31.39■■■□□ 2.61
RALGPS1-206ENST00000394011 FBXO41Q8TF61 875 aa31.37■■■□□ 2.61
RALGPS1-206ENST00000394011 MBD5Q9P267 1494 aa31.37■■■□□ 2.61
RALGPS1-206ENST00000394011 SUPT6HQ7KZ85 1726 aaKnown RBP31.36■■■□□ 2.61
RALGPS1-206ENST00000394011 ZNF644Q9H582 1327 aaPredicted RBP31.36■■■□□ 2.61
RALGPS1-206ENST00000394011 STRCQ7RTU9 1775 aa31.31■■■□□ 2.6
RALGPS1-206ENST00000394011 MROH2AA6NES4 1674 aa31.3■■■□□ 2.6
RALGPS1-206ENST00000394011 A2MP01023 1474 aa31.29■■■□□ 2.6
RALGPS1-206ENST00000394011 NCOA2Q15596 1464 aa31.29■■■□□ 2.6
RALGPS1-206ENST00000394011 CNTLNQ9NXG0 1405 aa31.29■■■□□ 2.6
RALGPS1-206ENST00000394011 UHRF1BP1Q6BDS2 1440 aa31.28■■■□□ 2.6
RALGPS1-206ENST00000394011 ADGBQ8N7X0 1667 aa31.27■■■□□ 2.6
RALGPS1-206ENST00000394011 VPS8Q8N3P4 1428 aa31.25■■■□□ 2.59
RALGPS1-206ENST00000394011 ESF1Q9H501 851 aaKnown RBP31.21■■■□□ 2.59
RALGPS1-206ENST00000394011 CLTCQ00610 1675 aaKnown RBP31.21■■■□□ 2.59
RALGPS1-206ENST00000394011 RTEL1-TNFRSF6BF6WH68 1400 aa31.21■■■□□ 2.59
RALGPS1-206ENST00000394011 CAMSAP2Q08AD1 1489 aa31.2■■■□□ 2.58
RALGPS1-206ENST00000394011 ZMYM3Q14202 1370 aa31.18■■■□□ 2.58
RALGPS1-206ENST00000394011 LRRC9Q6ZRR7 1453 aa31.18■■■□□ 2.58
RALGPS1-206ENST00000394011 NPATQ14207 1427 aa31.16■■■□□ 2.58
RALGPS1-206ENST00000394011 CCDC141Q6ZP82 1450 aa31.15■■■□□ 2.58
RALGPS1-206ENST00000394011 MAP3K1Q13233 1512 aa31.12■■■□□ 2.57
RALGPS1-206ENST00000394011 ARHGEF5Q12774 1597 aa31.11■■■□□ 2.57
RALGPS1-206ENST00000394011 DHX29Q7Z478 1369 aaKnown RBP31.1■■■□□ 2.57
RALGPS1-206ENST00000394011 GGT6Q6P531 493 aa31.09■■■□□ 2.57
RALGPS1-206ENST00000394011 KANK4Q5T7N3 995 aaPredicted RBP31.08■■■□□ 2.57
RALGPS1-206ENST00000394011 PTPRKQ15262 1439 aa31.07■■■□□ 2.57
RALGPS1-206ENST00000394011 CERKQ8TCT0 537 aa31.06■■■□□ 2.56
RALGPS1-206ENST00000394011 NCOA1Q15788 1441 aa31.06■■■□□ 2.56
RALGPS1-206ENST00000394011 RSPH4AQ5TD94 716 aa31.05■■■□□ 2.56
RALGPS1-206ENST00000394011 PTPRTO14522 1441 aa31.05■■■□□ 2.56
RALGPS1-206ENST00000394011 MYO3AQ8NEV4 1616 aa31.05■■■□□ 2.56
RALGPS1-206ENST00000394011 ZNF142P52746 1687 aaPredicted RBP31.04■■■□□ 2.56
RALGPS1-206ENST00000394011 PPP6R1Q9UPN7 881 aa31.04■■■□□ 2.56
RALGPS1-206ENST00000394011 DMRT2Q9Y5R5 561 aa31.04■■■□□ 2.56
RALGPS1-206ENST00000394011 CAMSAP1Q5T5Y3 1602 aa31.01■■■□□ 2.55
RALGPS1-206ENST00000394011 MAST1Q9Y2H9 1570 aa30.98■■■□□ 2.55
RALGPS1-206ENST00000394011 CEP170BQ9Y4F5 1589 aaPredicted RBP30.96■■■□□ 2.55
RALGPS1-206ENST00000394011 KIF3BO15066 747 aa30.94■■■□□ 2.54
RALGPS1-206ENST00000394011 MYOM3Q5VTT5 1437 aa30.94■■■□□ 2.54
RALGPS1-206ENST00000394011 FAM135AQ9P2D6 1515 aa30.93■■■□□ 2.54
RALGPS1-206ENST00000394011 MIA2Q96PC5 1412 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms