RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 PTPRMP28827 1452 aa29.81■■■□□ 2.36
PDLIM7-205ENST00000393551 POGZQ7Z3K3 1410 aa29.8■■■□□ 2.36
PDLIM7-205ENST00000393551 MADDQ8WXG6 1647 aa29.79■■■□□ 2.36
PDLIM7-205ENST00000393551 ARID4BQ4LE39 1312 aaPredicted RBP29.79■■■□□ 2.36
PDLIM7-205ENST00000393551 ZFYVE16Q7Z3T8 1539 aa29.78■■■□□ 2.36
PDLIM7-205ENST00000393551 EFCAB2Q5VUJ9 269 aa29.78■■■□□ 2.36
PDLIM7-205ENST00000393551 CLIP1P30622 1438 aa29.77■■■□□ 2.36
PDLIM7-205ENST00000393551 CCDC18Q5T9S5 1454 aa29.76■■■□□ 2.35
PDLIM7-205ENST00000393551 MAGI2Q86UL8 1455 aa29.76■■■□□ 2.35
PDLIM7-205ENST00000393551 CDC42BPBQ9Y5S2 1711 aa29.74■■■□□ 2.35
PDLIM7-205ENST00000393551 FYCO1Q9BQS8 1478 aa29.73■■■□□ 2.35
PDLIM7-205ENST00000393551 ARHGAP5Q13017 1502 aa29.72■■■□□ 2.35
PDLIM7-205ENST00000393551 RIMS1Q86UR5 1692 aaKnown RBP29.67■■■□□ 2.34
PDLIM7-205ENST00000393551 PREX2Q70Z35 1606 aa29.67■■■□□ 2.34
PDLIM7-205ENST00000393551 KDM5CP41229 1560 aa29.64■■■□□ 2.34
PDLIM7-205ENST00000393551 AFAP1Q8N556 730 aa29.64■■■□□ 2.34
PDLIM7-205ENST00000393551 ZNF518AQ6AHZ1 1483 aa29.63■■■□□ 2.33
PDLIM7-205ENST00000393551 CDC42BPAQ5VT25 1732 aa29.62■■■□□ 2.33
PDLIM7-205ENST00000393551 ATP10AO60312 1499 aa29.62■■■□□ 2.33
PDLIM7-205ENST00000393551 ARHGEF12Q9NZN5 1544 aa29.61■■■□□ 2.33
PDLIM7-205ENST00000393551 C9orf84Q5VXU9 1444 aa29.58■■■□□ 2.33
PDLIM7-205ENST00000393551 ABCC1P33527 1531 aa29.57■■■□□ 2.32
PDLIM7-205ENST00000393551 MLECQ14165 292 aa29.56■■■□□ 2.32
PDLIM7-205ENST00000393551 TRAPPC8Q9Y2L5 1435 aa29.55■■■□□ 2.32
PDLIM7-205ENST00000393551 ITSN2Q9NZM3 1697 aa29.54■■■□□ 2.32
PDLIM7-205ENST00000393551 FER1L4A9Z1Z3 1794 aa29.54■■■□□ 2.32
PDLIM7-205ENST00000393551 LMTK3Q96Q04 1460 aa29.53■■■□□ 2.32
PDLIM7-205ENST00000393551 DIP2CQ9Y2E4 1556 aa29.52■■■□□ 2.32
PDLIM7-205ENST00000393551 MLH3Q9UHC1 1453 aa29.51■■■□□ 2.31
PDLIM7-205ENST00000393551 GPATCH8Q9UKJ3 1502 aaKnown RBP29.5■■■□□ 2.31
PDLIM7-205ENST00000393551 ABCA6Q8N139 1617 aa29.5■■■□□ 2.31
PDLIM7-205ENST00000393551 CEP162Q5TB80 1403 aa29.48■■■□□ 2.31
PDLIM7-205ENST00000393551 SAMD9LQ8IVG5 1584 aa29.47■■■□□ 2.31
PDLIM7-205ENST00000393551 ILDR1Q86SU0 546 aaPredicted RBP29.47■■■□□ 2.31
PDLIM7-205ENST00000393551 PLPPR3Q6T4P5 718 aa29.46■■■□□ 2.31
PDLIM7-205ENST00000393551 REREQ9P2R6 1566 aa29.45■■■□□ 2.31
PDLIM7-205ENST00000393551 KIDINS220Q9ULH0 1771 aa29.44■■■□□ 2.3
PDLIM7-205ENST00000393551 MYT1LQ9UL68 1186 aa29.42■■■□□ 2.3
PDLIM7-205ENST00000393551 ZNF777Q9ULD5 760 aaPredicted RBP29.41■■■□□ 2.3
PDLIM7-205ENST00000393551 SYCP2Q9BX26 1530 aa29.4■■■□□ 2.3
PDLIM7-205ENST00000393551 MTUS2Q5JR59 1369 aa29.39■■■□□ 2.29
PDLIM7-205ENST00000393551 HNRNPMP52272 730 aaKnown RBP eCLIP29.36■■■□□ 2.291e-7■■■□□ 16.6
PDLIM7-205ENST00000393551 HSPA2P54652 639 aa29.36■■■□□ 2.29
PDLIM7-205ENST00000393551 AGLP35573 1532 aa29.35■■■□□ 2.29
PDLIM7-205ENST00000393551 CEBPAP49715 358 aaPredicted RBP29.35■■■□□ 2.29
PDLIM7-205ENST00000393551 CCNB3Q8WWL7 1395 aa29.35■■■□□ 2.29
PDLIM7-205ENST00000393551 CFDP1Q9UEE9 299 aaPredicted RBP29.34■■■□□ 2.29
PDLIM7-205ENST00000393551 LOC105371045A0A1W2PR82 267 aa29.33■■■□□ 2.29
PDLIM7-205ENST00000393551 TIAM1Q13009 1591 aa29.32■■■□□ 2.28
PDLIM7-205ENST00000393551 EHBP1L1Q8N3D4 1523 aa29.32■■■□□ 2.28
PDLIM7-205ENST00000393551 KIAA1107Q9UPP5 1409 aa29.32■■■□□ 2.28
PDLIM7-205ENST00000393551 ZNF644Q9H582 1327 aaPredicted RBP29.27■■■□□ 2.28
PDLIM7-205ENST00000393551 PLEKHH2Q8IVE3 1493 aa29.27■■■□□ 2.28
PDLIM7-205ENST00000393551 SPAG9O60271 1321 aaKnown RBP29.26■■■□□ 2.27
PDLIM7-205ENST00000393551 INO80Q9ULG1 1556 aaPredicted RBP29.26■■■□□ 2.27
PDLIM7-205ENST00000393551 PREX1Q8TCU6 1659 aa29.25■■■□□ 2.27
PDLIM7-205ENST00000393551 ATP7AQ04656 1500 aa29.25■■■□□ 2.27
PDLIM7-205ENST00000393551 C3P01024 1663 aa29.24■■■□□ 2.27
PDLIM7-205ENST00000393551 SETD1BQ9UPS6 1966 aaKnown RBP29.21■■■□□ 2.27
PDLIM7-205ENST00000393551 MBD5Q9P267 1494 aa29.21■■■□□ 2.27
PDLIM7-205ENST00000393551 SUPT6HQ7KZ85 1726 aaKnown RBP29.2■■■□□ 2.26
PDLIM7-205ENST00000393551 PLXNC1O60486 1568 aa29.18■■■□□ 2.26
PDLIM7-205ENST00000393551 NCOA2Q15596 1464 aa29.18■■■□□ 2.26
PDLIM7-205ENST00000393551 VPS8Q8N3P4 1428 aa29.16■■■□□ 2.26
PDLIM7-205ENST00000393551 A2MP01023 1474 aa29.13■■■□□ 2.25
PDLIM7-205ENST00000393551 UHRF1BP1Q6BDS2 1440 aa29.11■■■□□ 2.25
PDLIM7-205ENST00000393551 CNTLNQ9NXG0 1405 aa29.11■■■□□ 2.25
PDLIM7-205ENST00000393551 ESF1Q9H501 851 aaKnown RBP29.1■■■□□ 2.25
PDLIM7-205ENST00000393551 ADGBQ8N7X0 1667 aa29.09■■■□□ 2.25
PDLIM7-205ENST00000393551 STRCQ7RTU9 1775 aa29.09■■■□□ 2.25
PDLIM7-205ENST00000393551 MROH2AA6NES4 1674 aa29.09■■■□□ 2.25
PDLIM7-205ENST00000393551 LRRC9Q6ZRR7 1453 aa29.08■■■□□ 2.25
PDLIM7-205ENST00000393551 CAMSAP2Q08AD1 1489 aa29.07■■■□□ 2.24
PDLIM7-205ENST00000393551 RTEL1-TNFRSF6BF6WH68 1400 aa29.05■■■□□ 2.24
PDLIM7-205ENST00000393551 FBXO41Q8TF61 875 aa29.05■■■□□ 2.24
PDLIM7-205ENST00000393551 ZMYM3Q14202 1370 aa29.04■■■□□ 2.24
PDLIM7-205ENST00000393551 CLTCQ00610 1675 aaKnown RBP29.04■■■□□ 2.24
PDLIM7-205ENST00000393551 KANK4Q5T7N3 995 aaPredicted RBP29.03■■■□□ 2.24
PDLIM7-205ENST00000393551 CCDC141Q6ZP82 1450 aa29.01■■■□□ 2.23
PDLIM7-205ENST00000393551 GGT6Q6P531 493 aa29■■■□□ 2.23
PDLIM7-205ENST00000393551 MAP3K1Q13233 1512 aa28.99■■■□□ 2.23
PDLIM7-205ENST00000393551 NPATQ14207 1427 aa28.98■■■□□ 2.23
PDLIM7-205ENST00000393551 DHX29Q7Z478 1369 aaKnown RBP28.97■■■□□ 2.23
PDLIM7-205ENST00000393551 ARHGEF5Q12774 1597 aa28.96■■■□□ 2.23
PDLIM7-205ENST00000393551 RSPH4AQ5TD94 716 aa28.94■■■□□ 2.22
PDLIM7-205ENST00000393551 PTPRKQ15262 1439 aa28.92■■■□□ 2.22
PDLIM7-205ENST00000393551 PPP6R1Q9UPN7 881 aa28.91■■■□□ 2.22
PDLIM7-205ENST00000393551 CERKQ8TCT0 537 aa28.89■■■□□ 2.22
PDLIM7-205ENST00000393551 DMRT2Q9Y5R5 561 aa28.88■■■□□ 2.21
PDLIM7-205ENST00000393551 NCOA1Q15788 1441 aa28.86■■■□□ 2.21
PDLIM7-205ENST00000393551 KIF3BO15066 747 aa28.86■■■□□ 2.21
PDLIM7-205ENST00000393551 MYO3AQ8NEV4 1616 aa28.86■■■□□ 2.21
PDLIM7-205ENST00000393551 MYOM3Q5VTT5 1437 aa28.86■■■□□ 2.21
PDLIM7-205ENST00000393551 PTPRTO14522 1441 aa28.85■■■□□ 2.21
PDLIM7-205ENST00000393551 CAMSAP1Q5T5Y3 1602 aa28.84■■■□□ 2.21
PDLIM7-205ENST00000393551 ZNF142P52746 1687 aaPredicted RBP28.83■■■□□ 2.21
PDLIM7-205ENST00000393551 MIA2Q96PC5 1412 aa28.83■■■□□ 2.21
PDLIM7-205ENST00000393551 TSPY4P0CV99 314 aa28.82■■■□□ 2.2
PDLIM7-205ENST00000393551 TSPY10P0CW01 314 aa28.82■■■□□ 2.2
PDLIM7-205ENST00000393551 MAST1Q9Y2H9 1570 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms