RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 CCDC18Q5T9S5 1454 aa20.34■□□□□ 0.85
CTSC-202ENST00000393301 SCAPERQ9BY12 1400 aa20.33■□□□□ 0.84
CTSC-202ENST00000393301 PCF11O94913 1555 aaKnown RBP20.33■□□□□ 0.84
CTSC-202ENST00000393301 KDM5CP41229 1560 aa20.33■□□□□ 0.84
CTSC-202ENST00000393301 CLIP1P30622 1438 aa20.32■□□□□ 0.84
CTSC-202ENST00000393301 YEATS2Q9ULM3 1422 aa20.32■□□□□ 0.84
CTSC-202ENST00000393301 EFCAB2Q5VUJ9 269 aa20.29■□□□□ 0.84
CTSC-202ENST00000393301 CDC42BPBQ9Y5S2 1711 aa20.29■□□□□ 0.84
CTSC-202ENST00000393301 ZNF518AQ6AHZ1 1483 aa20.29■□□□□ 0.84
CTSC-202ENST00000393301 FYCO1Q9BQS8 1478 aa20.29■□□□□ 0.84
CTSC-202ENST00000393301 RIMS1Q86UR5 1692 aaKnown RBP20.29■□□□□ 0.84
CTSC-202ENST00000393301 PREX2Q70Z35 1606 aa20.28■□□□□ 0.84
CTSC-202ENST00000393301 REREQ9P2R6 1566 aa20.26■□□□□ 0.83
CTSC-202ENST00000393301 ATP10AO60312 1499 aa20.25■□□□□ 0.83
CTSC-202ENST00000393301 LMTK3Q96Q04 1460 aa20.25■□□□□ 0.83
CTSC-202ENST00000393301 ARHGEF12Q9NZN5 1544 aa20.25■□□□□ 0.83
CTSC-202ENST00000393301 C9orf84Q5VXU9 1444 aa20.25■□□□□ 0.83
CTSC-202ENST00000393301 ARHGAP5Q13017 1502 aa20.24■□□□□ 0.83
CTSC-202ENST00000393301 ARID4BQ4LE39 1312 aaPredicted RBP20.24■□□□□ 0.83
CTSC-202ENST00000393301 FER1L4A9Z1Z3 1794 aa20.23■□□□□ 0.83
CTSC-202ENST00000393301 ABCC1P33527 1531 aa20.22■□□□□ 0.83
CTSC-202ENST00000393301 EHMT2Q96KQ7 1210 aa20.22■□□□□ 0.83
CTSC-202ENST00000393301 MLH3Q9UHC1 1453 aa20.21■□□□□ 0.83
CTSC-202ENST00000393301 CDC42BPAQ5VT25 1732 aa20.21■□□□□ 0.83
CTSC-202ENST00000393301 ATP1B4Q9UN42 357 aaPredicted RBP20.2■□□□□ 0.82
CTSC-202ENST00000393301 ITSN2Q9NZM3 1697 aa20.19■□□□□ 0.82
CTSC-202ENST00000393301 DIP2CQ9Y2E4 1556 aa20.19■□□□□ 0.82
CTSC-202ENST00000393301 ILDR1Q86SU0 546 aaPredicted RBP20.17■□□□□ 0.82
CTSC-202ENST00000393301 AGLP35573 1532 aa20.16■□□□□ 0.82
CTSC-202ENST00000393301 ABCA6Q8N139 1617 aa20.15■□□□□ 0.82
CTSC-202ENST00000393301 KIDINS220Q9ULH0 1771 aa20.12■□□□□ 0.81
CTSC-202ENST00000393301 TRAPPC8Q9Y2L5 1435 aa20.11■□□□□ 0.81
CTSC-202ENST00000393301 AFAP1Q8N556 730 aa20.11■□□□□ 0.81
CTSC-202ENST00000393301 GPATCH8Q9UKJ3 1502 aaKnown RBP20.1■□□□□ 0.81
CTSC-202ENST00000393301 SETD1BQ9UPS6 1966 aaKnown RBP20.1■□□□□ 0.81
CTSC-202ENST00000393301 SAMD9LQ8IVG5 1584 aa20.09■□□□□ 0.81
CTSC-202ENST00000393301 PREX1Q8TCU6 1659 aa20.09■□□□□ 0.81
CTSC-202ENST00000393301 KIAA1107Q9UPP5 1409 aa20.06■□□□□ 0.8
CTSC-202ENST00000393301 PLEKHH2Q8IVE3 1493 aa20.05■□□□□ 0.8
CTSC-202ENST00000393301 SYCP2Q9BX26 1530 aa20.03■□□□□ 0.8
CTSC-202ENST00000393301 INO80Q9ULG1 1556 aaPredicted RBP20.02■□□□□ 0.8
CTSC-202ENST00000393301 EHBP1L1Q8N3D4 1523 aa20.02■□□□□ 0.79
CTSC-202ENST00000393301 MLECQ14165 292 aa20.01■□□□□ 0.79
CTSC-202ENST00000393301 C3P01024 1663 aa20■□□□□ 0.79
CTSC-202ENST00000393301 PLXNC1O60486 1568 aa20■□□□□ 0.79
CTSC-202ENST00000393301 MROH2AA6NES4 1674 aa19.99■□□□□ 0.79
CTSC-202ENST00000393301 CEP162Q5TB80 1403 aa19.98■□□□□ 0.79
CTSC-202ENST00000393301 CNTLNQ9NXG0 1405 aa19.98■□□□□ 0.79
CTSC-202ENST00000393301 TIAM1Q13009 1591 aa19.98■□□□□ 0.79
CTSC-202ENST00000393301 ATP7AQ04656 1500 aa19.97■□□□□ 0.79
CTSC-202ENST00000393301 FBXO41Q8TF61 875 aa19.97■□□□□ 0.79
CTSC-202ENST00000393301 MTUS2Q5JR59 1369 aa19.96■□□□□ 0.79
CTSC-202ENST00000393301 CCNB3Q8WWL7 1395 aa19.95■□□□□ 0.79
CTSC-202ENST00000393301 HSPA2P54652 639 aa19.94■□□□□ 0.78
CTSC-202ENST00000393301 STRCQ7RTU9 1775 aa19.93■□□□□ 0.78
CTSC-202ENST00000393301 UHRF1BP1Q6BDS2 1440 aa19.93■□□□□ 0.78
CTSC-202ENST00000393301 CFDP1Q9UEE9 299 aaPredicted RBP19.92■□□□□ 0.78
CTSC-202ENST00000393301 MBD5Q9P267 1494 aa19.92■□□□□ 0.78
CTSC-202ENST00000393301 ADGBQ8N7X0 1667 aa19.91■□□□□ 0.78
CTSC-202ENST00000393301 SPAG9O60271 1321 aaKnown RBP19.91■□□□□ 0.78
CTSC-202ENST00000393301 CEBPAP49715 358 aaPredicted RBP19.9■□□□□ 0.78
CTSC-202ENST00000393301 NPATQ14207 1427 aa19.9■□□□□ 0.78
CTSC-202ENST00000393301 RTEL1-TNFRSF6BF6WH68 1400 aa19.89■□□□□ 0.77
CTSC-202ENST00000393301 A2MP01023 1474 aa19.89■□□□□ 0.77
CTSC-202ENST00000393301 MYT1LQ9UL68 1186 aa19.89■□□□□ 0.77
CTSC-202ENST00000393301 SUPT6HQ7KZ85 1726 aaKnown RBP19.88■□□□□ 0.77
CTSC-202ENST00000393301 HNRNPMP52272 730 aaKnown RBP eCLIP19.87■□□□□ 0.77
CTSC-202ENST00000393301 ZNF777Q9ULD5 760 aaPredicted RBP19.87■□□□□ 0.77
CTSC-202ENST00000393301 PLPPR3Q6T4P5 718 aa19.85■□□□□ 0.77
CTSC-202ENST00000393301 FAM135AQ9P2D6 1515 aa19.83■□□□□ 0.77
CTSC-202ENST00000393301 PPP6R1Q9UPN7 881 aa19.83■□□□□ 0.77
CTSC-202ENST00000393301 NCOA2Q15596 1464 aa19.83■□□□□ 0.76
CTSC-202ENST00000393301 PTPRTO14522 1441 aa19.83■□□□□ 0.76
CTSC-202ENST00000393301 MAP3K1Q13233 1512 aa19.82■□□□□ 0.76
CTSC-202ENST00000393301 ZNF142P52746 1687 aaPredicted RBP19.82■□□□□ 0.76
CTSC-202ENST00000393301 VPS8Q8N3P4 1428 aa19.82■□□□□ 0.76
CTSC-202ENST00000393301 ESF1Q9H501 851 aaKnown RBP19.81■□□□□ 0.76
CTSC-202ENST00000393301 DMRT2Q9Y5R5 561 aa19.81■□□□□ 0.76
CTSC-202ENST00000393301 CLTCQ00610 1675 aaKnown RBP19.81■□□□□ 0.76
CTSC-202ENST00000393301 CCDC141Q6ZP82 1450 aa19.8■□□□□ 0.76
CTSC-202ENST00000393301 ARHGEF5Q12774 1597 aa19.8■□□□□ 0.76
CTSC-202ENST00000393301 ZMYM3Q14202 1370 aa19.8■□□□□ 0.76
CTSC-202ENST00000393301 NCOA1Q15788 1441 aa19.79■□□□□ 0.76
CTSC-202ENST00000393301 CAMSAP2Q08AD1 1489 aa19.79■□□□□ 0.76
CTSC-202ENST00000393301 ZNF644Q9H582 1327 aaPredicted RBP19.78■□□□□ 0.76
CTSC-202ENST00000393301 RSPH4AQ5TD94 716 aa19.77■□□□□ 0.76
CTSC-202ENST00000393301 CERKQ8TCT0 537 aa19.77■□□□□ 0.76
CTSC-202ENST00000393301 PTPRKQ15262 1439 aa19.76■□□□□ 0.75
CTSC-202ENST00000393301 MYO3AQ8NEV4 1616 aa19.76■□□□□ 0.75
CTSC-202ENST00000393301 LRRC9Q6ZRR7 1453 aa19.76■□□□□ 0.75
CTSC-202ENST00000393301 DHX29Q7Z478 1369 aaKnown RBP19.76■□□□□ 0.75
CTSC-202ENST00000393301 PLA2R1Q13018 1463 aa19.74■□□□□ 0.75
CTSC-202ENST00000393301 MAST1Q9Y2H9 1570 aa19.73■□□□□ 0.75
CTSC-202ENST00000393301 CAMSAP1Q5T5Y3 1602 aa19.72■□□□□ 0.75
CTSC-202ENST00000393301 CEP170BQ9Y4F5 1589 aaPredicted RBP19.71■□□□□ 0.75
CTSC-202ENST00000393301 LTBP4Q8N2S1 1624 aa19.71■□□□□ 0.75
CTSC-202ENST00000393301 IQSEC2Q5JU85 1478 aa19.71■□□□□ 0.75
CTSC-202ENST00000393301 TCOF1Q13428 1488 aaKnown RBP19.69■□□□□ 0.74
CTSC-202ENST00000393301 KDM5DQ9BY66 1539 aa19.69■□□□□ 0.74
CTSC-202ENST00000393301 MIA2Q96PC5 1412 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms