RNA–Protein interactions for RNA: ENST00000392924.1

SYCP3-202, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 845 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-202ENST00000392924 TMC2Q8TDI7 906 aa12.44□□□□□ -0.42
SYCP3-202ENST00000392924 KIF3CO14782 793 aa12.43□□□□□ -0.42
SYCP3-202ENST00000392924 HOXB3P14651 431 aaPredicted RBP12.42□□□□□ -0.42
SYCP3-202ENST00000392924 SPRYD3Q8NCJ5 442 aa12.42□□□□□ -0.42
SYCP3-202ENST00000392924 C2orf72A6NCS6 295 aa12.4□□□□□ -0.42
SYCP3-202ENST00000392924 POTEMA6NI47 508 aa12.38□□□□□ -0.43
SYCP3-202ENST00000392924 DOK7Q18PE1 504 aa12.38□□□□□ -0.43
SYCP3-202ENST00000392924 POTEGQ6S5H5 508 aa12.38□□□□□ -0.43
SYCP3-202ENST00000392924 ZNF710Q8N1W2 664 aa12.38□□□□□ -0.43
SYCP3-202ENST00000392924 RIMBP2O15034 1052 aa12.36□□□□□ -0.43
SYCP3-202ENST00000392924 CFAP44Q96MT7 982 aa12.36□□□□□ -0.43
SYCP3-202ENST00000392924 PAXIP1Q6ZW49 1069 aaPredicted RBP12.35□□□□□ -0.43
SYCP3-202ENST00000392924 GPHNQ9NQX3 736 aaPredicted RBP12.32□□□□□ -0.44
SYCP3-202ENST00000392924 PDE4AP27815 886 aa12.31□□□□□ -0.44
SYCP3-202ENST00000392924 MARVELD3Q96A59 401 aa12.28□□□□□ -0.44
SYCP3-202ENST00000392924 HOXB1P14653 301 aaPredicted RBP12.27□□□□□ -0.45
SYCP3-202ENST00000392924 FOXK1P85037 733 aa12.27□□□□□ -0.45
SYCP3-202ENST00000392924 CRISPLD2Q9H0B8 497 aa12.26□□□□□ -0.45
SYCP3-202ENST00000392924 ZSWIM6Q9HCJ5 1215 aa12.26□□□□□ -0.45
SYCP3-202ENST00000392924 DSG2Q14126 1118 aa12.25□□□□□ -0.45
SYCP3-202ENST00000392924 GPR153Q6NV75 609 aa12.25□□□□□ -0.45
SYCP3-202ENST00000392924 NCKAP5LQ9HCH0 1330 aa12.25□□□□□ -0.45
SYCP3-202ENST00000392924 PLPP6Q8IY26 295 aa12.24□□□□□ -0.45
SYCP3-202ENST00000392924 CADPS2Q86UW7 1296 aa12.23□□□□□ -0.45
SYCP3-202ENST00000392924 SLC34A2O95436 690 aa12.22□□□□□ -0.45
SYCP3-202ENST00000392924 LARP6Q9BRS8 491 aaKnown RBP12.22□□□□□ -0.45
SYCP3-202ENST00000392924 EMP3P54852 163 aa12.21□□□□□ -0.45
SYCP3-202ENST00000392924 ARSIQ5FYB1 569 aa12.2□□□□□ -0.46
SYCP3-202ENST00000392924 PPP1R15BQ5SWA1 713 aa12.18□□□□□ -0.46
SYCP3-202ENST00000392924 DDX27Q96GQ7 796 aaKnown RBP12.18□□□□□ -0.46
SYCP3-202ENST00000392924 PCDH10Q9P2E7 1040 aa12.18□□□□□ -0.46
SYCP3-202ENST00000392924 POTEB3A0JP26 581 aa12.17□□□□□ -0.46
SYCP3-202ENST00000392924 TBC1D12O60347 775 aa12.17□□□□□ -0.46
SYCP3-202ENST00000392924 POTEBQ6S5H4 581 aa12.17□□□□□ -0.46
SYCP3-202ENST00000392924 KHSRPQ92945 711 aaKnown RBP eCLIP12.17□□□□□ -0.46
SYCP3-202ENST00000392924 FAM205CA6NFA0 338 aa12.16□□□□□ -0.46
SYCP3-202ENST00000392924 PCDHGA4Q9Y5G9 962 aa12.16□□□□□ -0.46
SYCP3-202ENST00000392924 CDAN1Q8IWY9 1227 aa12.15□□□□□ -0.46
SYCP3-202ENST00000392924 MFSD10Q14728 455 aa12.14□□□□□ -0.47
SYCP3-202ENST00000392924 PTCD2Q8WV60 388 aaKnown RBP12.14□□□□□ -0.47
SYCP3-202ENST00000392924 ERBB3P21860 1342 aa12.13□□□□□ -0.47
SYCP3-202ENST00000392924 HS3ST6Q96QI5 342 aa12.13□□□□□ -0.47
SYCP3-202ENST00000392924 WDR70Q9NW82 654 aa12.1□□□□□ -0.47
SYCP3-202ENST00000392924 NUDT7P0C024 238 aa12.09□□□□□ -0.47
SYCP3-202ENST00000392924 KDM4FA0A1W2PPD8 638 aa12.08□□□□□ -0.48
SYCP3-202ENST00000392924 OXER1Q8TDS5 423 aa12.07□□□□□ -0.48
SYCP3-202ENST00000392924 UPF1Q92900 1129 aaKnown RBP eCLIP12.07□□□□□ -0.48
SYCP3-202ENST00000392924 ZNF316A6NFI3 1004 aaPredicted RBP12.06□□□□□ -0.48
SYCP3-202ENST00000392924 VARS2Q5ST30 1063 aaKnown RBP12.06□□□□□ -0.48
SYCP3-202ENST00000392924 PLCB2Q00722 1185 aa12.05□□□□□ -0.48
SYCP3-202ENST00000392924 TSHZ2Q9NRE2 1034 aa12.04□□□□□ -0.48
SYCP3-202ENST00000392924 MAP3K9P80192 1104 aa12.03□□□□□ -0.48
SYCP3-202ENST00000392924 LHX6Q9UPM6 363 aa12.03□□□□□ -0.48
SYCP3-202ENST00000392924 ZNF687Q8N1G0 1237 aa12□□□□□ -0.49
SYCP3-202ENST00000392924 EMILIN3Q9NT22 766 aa12□□□□□ -0.49
SYCP3-202ENST00000392924 PSDA5PKW4 1024 aaPredicted RBP11.98□□□□□ -0.49
SYCP3-202ENST00000392924 CAMK2BQ13554 666 aa11.98□□□□□ -0.49
SYCP3-202ENST00000392924 KRTAP3-3Q9BYR6 98 aa11.98□□□□□ -0.49
SYCP3-202ENST00000392924 KRTAP3-2Q9BYR7 98 aa11.98□□□□□ -0.49
SYCP3-202ENST00000392924 E2F4Q16254 413 aa11.95□□□□□ -0.5
SYCP3-202ENST00000392924 EVI5O60447 810 aa11.94□□□□□ -0.5
SYCP3-202ENST00000392924 HAP1P54257 671 aaPredicted RBP11.94□□□□□ -0.5
SYCP3-202ENST00000392924 ANO8Q9HCE9 1232 aaPredicted RBP11.94□□□□□ -0.5
SYCP3-202ENST00000392924 PPP4R3BQ5MIZ7 849 aa11.89□□□□□ -0.51
SYCP3-202ENST00000392924 PLSCR2Q9NRY7 297 aa11.89□□□□□ -0.51
SYCP3-202ENST00000392924 DPYSL4O14531 572 aa11.88□□□□□ -0.51
SYCP3-202ENST00000392924 POTEEQ6S8J3 1075 aa11.88□□□□□ -0.51
SYCP3-202ENST00000392924 ZNF454Q8N9F8 522 aa11.86□□□□□ -0.51
SYCP3-202ENST00000392924 PBX2P40425 430 aa11.85□□□□□ -0.51
SYCP3-202ENST00000392924 SPNS2Q8IVW8 549 aa11.85□□□□□ -0.51
SYCP3-202ENST00000392924 KCNH8Q96L42 1107 aa11.85□□□□□ -0.51
SYCP3-202ENST00000392924 FOSBP53539 338 aa11.83□□□□□ -0.52
SYCP3-202ENST00000392924 SPDYE16A6NNV3 312 aaPredicted RBP11.82□□□□□ -0.52
SYCP3-202ENST00000392924 AXIN2Q9Y2T1 843 aa11.82□□□□□ -0.52
SYCP3-202ENST00000392924 ARIH1Q9Y4X5 557 aaPredicted RBP11.81□□□□□ -0.52
SYCP3-202ENST00000392924 ARHGAP33O14559 1287 aa11.8□□□□□ -0.52
SYCP3-202ENST00000392924 JPH4Q96JJ6 628 aa11.8□□□□□ -0.52
SYCP3-202ENST00000392924 ANKRD13DQ6ZTN6 518 aa11.79□□□□□ -0.52
SYCP3-202ENST00000392924 ZDHHC16Q969W1 377 aa11.78□□□□□ -0.52
SYCP3-202ENST00000392924 LSM11P83369 360 aaKnown RBP eCLIP11.77□□□□□ -0.53
SYCP3-202ENST00000392924 P3H3Q8IVL6 736 aa11.77□□□□□ -0.53
SYCP3-202ENST00000392924 PHF14O94880 888 aa11.76□□□□□ -0.53
SYCP3-202ENST00000392924 PTGER2P43116 358 aa11.76□□□□□ -0.53
SYCP3-202ENST00000392924 PSEN2P49810 448 aa11.76□□□□□ -0.53
SYCP3-202ENST00000392924 PCDHGA10Q9Y5H3 936 aa11.76□□□□□ -0.53
SYCP3-202ENST00000392924 MMRN1Q13201 1228 aa11.75□□□□□ -0.53
SYCP3-202ENST00000392924 PDIA6Q15084 440 aa11.75□□□□□ -0.53
SYCP3-202ENST00000392924 ARHGEF1Q92888 912 aaKnown RBP11.75□□□□□ -0.53
SYCP3-202ENST00000392924 TYW1BQ6NUM6 668 aa11.74□□□□□ -0.53
SYCP3-202ENST00000392924 FBXW7Q969H0 707 aa11.74□□□□□ -0.53
SYCP3-202ENST00000392924 KCNK17Q96T54 332 aa11.74□□□□□ -0.53
SYCP3-202ENST00000392924 EPAS1Q99814 870 aa11.74□□□□□ -0.53
SYCP3-202ENST00000392924 BCL2L12Q9HB09 334 aa11.74□□□□□ -0.53
SYCP3-202ENST00000392924 PTPREP23469 700 aa11.73□□□□□ -0.53
SYCP3-202ENST00000392924 DMRTA1Q5VZB9 504 aa11.73□□□□□ -0.53
SYCP3-202ENST00000392924 DDX12PQ92771 950 aa11.73□□□□□ -0.53
SYCP3-202ENST00000392924 ADAM33Q9BZ11 813 aa11.73□□□□□ -0.53
SYCP3-202ENST00000392924 VSIG10Q8N0Z9 540 aa11.72□□□□□ -0.53
SYCP3-202ENST00000392924 KCNV2Q8TDN2 545 aa11.71□□□□□ -0.53
SYCP3-202ENST00000392924 GRXCR2A6NFK2 248 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms