RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 CC2D1BQ5T0F9 858 aaKnown RBP18.56■□□□□ 0.56
CCDC50-201ENST00000392455 RGS3P49796 1198 aa18.55■□□□□ 0.56
CCDC50-201ENST00000392455 HDAC5Q9UQL6 1122 aa18.55■□□□□ 0.56
CCDC50-201ENST00000392455 CEP162Q5TB80 1403 aa18.54■□□□□ 0.56
CCDC50-201ENST00000392455 U2SURPO15042 1029 aaKnown RBP18.53■□□□□ 0.56
CCDC50-201ENST00000392455 TMX4Q9H1E5 349 aaPredicted RBP18.53■□□□□ 0.56
CCDC50-201ENST00000392455 GOLGA6L3A6NEY3 463 aa18.53■□□□□ 0.56
CCDC50-201ENST00000392455 KIF3AQ9Y496 699 aa18.53■□□□□ 0.56
CCDC50-201ENST00000392455 HMMRO75330 724 aa18.52■□□□□ 0.56
CCDC50-201ENST00000392455 TSR1Q2NL82 804 aaKnown RBP18.51■□□□□ 0.55
CCDC50-201ENST00000392455 PPP4R2Q9NY27 417 aa18.51■□□□□ 0.55
CCDC50-201ENST00000392455 ERCC6Q03468 1493 aa18.49■□□□□ 0.55
CCDC50-201ENST00000392455 GPATCH3Q96I76 525 aa18.48■□□□□ 0.55
CCDC50-201ENST00000392455 KRI1Q8N9T8 703 aaKnown RBP18.48■□□□□ 0.55
CCDC50-201ENST00000392455 AMER1Q5JTC6 1135 aaPredicted RBP18.47■□□□□ 0.55
CCDC50-201ENST00000392455 ANO8Q9HCE9 1232 aaPredicted RBP18.46■□□□□ 0.55
CCDC50-201ENST00000392455 CALD1Q05682 793 aaKnown RBP18.46■□□□□ 0.55
CCDC50-201ENST00000392455 NOM1Q5C9Z4 860 aaKnown RBP18.45■□□□□ 0.54
CCDC50-201ENST00000392455 SOX12O15370 315 aa18.44■□□□□ 0.54
CCDC50-201ENST00000392455 CDR1P51861 262 aa18.44■□□□□ 0.54
CCDC50-201ENST00000392455 TPM1P09493 284 aa18.44■□□□□ 0.54
CCDC50-201ENST00000392455 TPM2P07951 284 aa18.44■□□□□ 0.54
CCDC50-201ENST00000392455 EIF4G1Q04637 1599 aaKnown RBP18.44■□□□□ 0.54
CCDC50-201ENST00000392455 BAZ1BQ9UIG0 1483 aaKnown RBP18.43■□□□□ 0.54
CCDC50-201ENST00000392455 TEX35Q5T0J7 233 aa18.43■□□□□ 0.54
CCDC50-201ENST00000392455 IPO8O15397 1037 aaKnown RBP18.42■□□□□ 0.54
CCDC50-201ENST00000392455 EEA1Q15075 1411 aa18.41■□□□□ 0.54
CCDC50-201ENST00000392455 RTN4Q9NQC3 1192 aaKnown RBP18.41■□□□□ 0.54
CCDC50-201ENST00000392455 KIF27Q86VH2 1401 aa18.41■□□□□ 0.54
CCDC50-201ENST00000392455 ISY1Q9ULR0 285 aaKnown RBP18.41■□□□□ 0.54
CCDC50-201ENST00000392455 HSP90B1P14625 803 aaKnown RBP18.39■□□□□ 0.54
CCDC50-201ENST00000392455 KANK1Q14678 1352 aa18.39■□□□□ 0.53
CCDC50-201ENST00000392455 SIN3AQ96ST3 1273 aa18.38■□□□□ 0.53
CCDC50-201ENST00000392455 SRPK2P78362 688 aaKnown RBP18.37■□□□□ 0.53
CCDC50-201ENST00000392455 MYO15BQ96JP2 1530 aa18.37■□□□□ 0.53
CCDC50-201ENST00000392455 WRNQ14191 1432 aaPredicted RBP eCLIP18.37■□□□□ 0.539e-6■■■■■ 50.1
CCDC50-201ENST00000392455 TMF1P82094 1093 aa18.37■□□□□ 0.53
CCDC50-201ENST00000392455 MLECQ14165 292 aa18.36■□□□□ 0.53
CCDC50-201ENST00000392455 HDGFP51858 240 aaKnown RBP18.36■□□□□ 0.53
CCDC50-201ENST00000392455 DCAF11Q8TEB1 546 aa18.35■□□□□ 0.53
CCDC50-201ENST00000392455 SPRYD3Q8NCJ5 442 aa18.35■□□□□ 0.53
CCDC50-201ENST00000392455 CEP164Q9UPV0 1460 aa18.35■□□□□ 0.53
CCDC50-201ENST00000392455 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.35■□□□□ 0.53
CCDC50-201ENST00000392455 RSPH6AQ9H0K4 717 aa18.34■□□□□ 0.53
CCDC50-201ENST00000392455 SAFB2Q14151 953 aaKnown RBP eCLIP18.34■□□□□ 0.53
CCDC50-201ENST00000392455 CCNB3Q8WWL7 1395 aa18.34■□□□□ 0.53
CCDC50-201ENST00000392455 TRHP20396 242 aaPredicted RBP18.33■□□□□ 0.53
CCDC50-201ENST00000392455 RDXP35241 583 aaKnown RBP18.33■□□□□ 0.53
CCDC50-201ENST00000392455 B4GALNT3Q6L9W6 998 aa18.33■□□□□ 0.53
CCDC50-201ENST00000392455 DCTN1Q14203 1278 aa18.32■□□□□ 0.52
CCDC50-201ENST00000392455 RASSF8Q8NHQ8 419 aa18.31■□□□□ 0.52
CCDC50-201ENST00000392455 RTF1Q92541 710 aaKnown RBP18.31■□□□□ 0.52
CCDC50-201ENST00000392455 ACBD3Q9H3P7 528 aa18.31■□□□□ 0.52
CCDC50-201ENST00000392455 ATP6V1DQ9Y5K8 247 aa18.31■□□□□ 0.52
CCDC50-201ENST00000392455 IPO7O95373 1038 aaKnown RBP18.31■□□□□ 0.52
CCDC50-201ENST00000392455 TCERG1O14776 1098 aaKnown RBP18.31■□□□□ 0.52
CCDC50-201ENST00000392455 MORC1Q86VD1 984 aa18.3■□□□□ 0.52
CCDC50-201ENST00000392455 HSP90AA2PQ14568 343 aaPredicted RBP18.3■□□□□ 0.52
CCDC50-201ENST00000392455 CCDC191Q8NCU4 936 aa18.29■□□□□ 0.52
CCDC50-201ENST00000392455 AK7Q96M32 723 aa18.28■□□□□ 0.52
CCDC50-201ENST00000392455 ANKRD20A12PQ8NF67 263 aa18.27■□□□□ 0.52
CCDC50-201ENST00000392455 ZRSR2Q15696 482 aaKnown RBP18.26■□□□□ 0.51
CCDC50-201ENST00000392455 APBB1O00213 710 aa18.26■□□□□ 0.51
CCDC50-201ENST00000392455 MYO6Q9UM54 1294 aa18.26■□□□□ 0.51
CCDC50-201ENST00000392455 STK26Q9P289 416 aa18.26■□□□□ 0.51
CCDC50-201ENST00000392455 HOOK1Q9UJC3 728 aaKnown RBP18.25■□□□□ 0.51
CCDC50-201ENST00000392455 TPD52L1Q16890 204 aaPredicted RBP18.25■□□□□ 0.51
CCDC50-201ENST00000392455 DDX11L8A8MPP1 907 aa18.25■□□□□ 0.51
CCDC50-201ENST00000392455 PAK3O75914 559 aaPredicted RBP18.24■□□□□ 0.51
CCDC50-201ENST00000392455 LRRFIP1Q32MZ4 808 aaKnown RBP18.24■□□□□ 0.51
CCDC50-201ENST00000392455 DEKP35659 375 aaKnown RBP18.24■□□□□ 0.51
CCDC50-201ENST00000392455 GOLGA6L19H0YKK7 550 aa18.23■□□□□ 0.51
CCDC50-201ENST00000392455 CWC15Q9P013 229 aaKnown RBP18.23■□□□□ 0.51
CCDC50-201ENST00000392455 KIF16BQ96L93 1317 aa18.22■□□□□ 0.51
CCDC50-201ENST00000392455 TNIKQ9UKE5 1360 aa18.22■□□□□ 0.51
CCDC50-201ENST00000392455 FHAD1B1AJZ9 1412 aa18.21■□□□□ 0.51
CCDC50-201ENST00000392455 MTERF4Q7Z6M4 381 aaKnown RBP18.21■□□□□ 0.51
CCDC50-201ENST00000392455 ZNF330Q9Y3S2 320 aaPredicted RBP18.21■□□□□ 0.51
CCDC50-201ENST00000392455 NEXNQ0ZGT2 675 aa18.21■□□□□ 0.51
CCDC50-201ENST00000392455 SKOR2Q2VWA4 1001 aaPredicted RBP18.21■□□□□ 0.51
CCDC50-201ENST00000392455 RUFY1Q96T51 708 aa18.21■□□□□ 0.51
CCDC50-201ENST00000392455 ST18O60284 1047 aa18.21■□□□□ 0.51
CCDC50-201ENST00000392455 RWDD1Q9H446 243 aaPredicted RBP18.2■□□□□ 0.5
CCDC50-201ENST00000392455 CCDC47Q96A33 483 aaKnown RBP18.19■□□□□ 0.5
CCDC50-201ENST00000392455 CAGE1Q8TC20 777 aa18.19■□□□□ 0.5
CCDC50-201ENST00000392455 HDGFL2Q7Z4V5 671 aaPredicted RBP18.19■□□□□ 0.5
CCDC50-201ENST00000392455 PMFBP1Q8TBY8 1022 aa18.18■□□□□ 0.5
CCDC50-201ENST00000392455 TCEAL9Q9UHQ7 104 aa18.18■□□□□ 0.5
CCDC50-201ENST00000392455 NACADO15069 1562 aa18.17■□□□□ 0.5
CCDC50-201ENST00000392455 GORABQ5T7V8 394 aa18.17■□□□□ 0.5
CCDC50-201ENST00000392455 ARGLU1Q9NWB6 273 aaPredicted RBP18.17■□□□□ 0.5
CCDC50-201ENST00000392455 MARCH6O60337 910 aa18.16■□□□□ 0.5
CCDC50-201ENST00000392455 KTN1Q86UP2 1357 aaKnown RBP18.16■□□□□ 0.5
CCDC50-201ENST00000392455 CSB-PGBD3P0DP91 1061 aa18.16■□□□□ 0.5
CCDC50-201ENST00000392455 GGT6Q6P531 493 aa18.15■□□□□ 0.5
CCDC50-201ENST00000392455 MAP7D2Q96T17 732 aa18.15■□□□□ 0.5
CCDC50-201ENST00000392455 STK11IPQ8N1F8 1099 aa18.15■□□□□ 0.5
CCDC50-201ENST00000392455 CCDC173Q0VFZ6 552 aa18.15■□□□□ 0.5
CCDC50-201ENST00000392455 ZNF771Q7L3S4 317 aaPredicted RBP18.15■□□□□ 0.5
CCDC50-201ENST00000392455 SPAG9O60271 1321 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms