RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 FANCAO15360 1455 aa39.5■■■■□ 3.91
HOMER3-202ENST00000392351 CFAP74Q9C0B2 1584 aa39.5■■■■□ 3.91
HOMER3-202ENST00000392351 PPARGC1BQ86YN6 1023 aaKnown RBP39.46■■■■□ 3.91
HOMER3-202ENST00000392351 NEO1Q92859 1461 aa39.45■■■■□ 3.91
HOMER3-202ENST00000392351 EFCAB2Q5VUJ9 269 aa39.41■■■■□ 3.9
HOMER3-202ENST00000392351 CFDP1Q9UEE9 299 aaPredicted RBP39.38■■■■□ 3.89
HOMER3-202ENST00000392351 AKNAQ7Z591 1439 aa39.37■■■■□ 3.89
HOMER3-202ENST00000392351 PHLDB1Q86UU1 1377 aa39.36■■■■□ 3.89
HOMER3-202ENST00000392351 KDM6BO15054 1643 aa39.35■■■■□ 3.89
HOMER3-202ENST00000392351 MYOM3Q5VTT5 1437 aa39.34■■■■□ 3.89
HOMER3-202ENST00000392351 SAMD9LQ8IVG5 1584 aa39.31■■■■□ 3.88
HOMER3-202ENST00000392351 ZNF777Q9ULD5 760 aaPredicted RBP39.31■■■■□ 3.88
HOMER3-202ENST00000392351 ADGRL1O94910 1474 aa39.31■■■■□ 3.88
HOMER3-202ENST00000392351 COL17A1Q9UMD9 1497 aaPredicted RBP39.27■■■■□ 3.88
HOMER3-202ENST00000392351 ABCC1P33527 1531 aa39.26■■■■□ 3.87
HOMER3-202ENST00000392351 MIA2Q96PC5 1412 aa39.23■■■■□ 3.87
HOMER3-202ENST00000392351 SCAPERQ9BY12 1400 aa39.22■■■■□ 3.87
HOMER3-202ENST00000392351 ZNF644Q9H582 1327 aaPredicted RBP39.2■■■■□ 3.87
HOMER3-202ENST00000392351 CAMSAP2Q08AD1 1489 aa39.19■■■■□ 3.86
HOMER3-202ENST00000392351 DENND4BO75064 1496 aaPredicted RBP39.19■■■■□ 3.86
HOMER3-202ENST00000392351 FGD6Q6ZV73 1430 aa39.19■■■■□ 3.86
HOMER3-202ENST00000392351 SYCP2Q9BX26 1530 aa39.18■■■■□ 3.86
HOMER3-202ENST00000392351 RICTORQ6R327 1708 aa39.17■■■■□ 3.86
HOMER3-202ENST00000392351 PLEKHH2Q8IVE3 1493 aa39.17■■■■□ 3.86
HOMER3-202ENST00000392351 ARHGEF12Q9NZN5 1544 aa39.16■■■■□ 3.86
HOMER3-202ENST00000392351 PTPN23Q9H3S7 1636 aa39.16■■■■□ 3.86
HOMER3-202ENST00000392351 FRMPD1Q5SYB0 1578 aa39.15■■■■□ 3.86
HOMER3-202ENST00000392351 RAPGEF3O95398 923 aa39.14■■■■□ 3.86
HOMER3-202ENST00000392351 POGZQ7Z3K3 1410 aa39.13■■■■□ 3.85
HOMER3-202ENST00000392351 KIAA1107Q9UPP5 1409 aa39.12■■■■□ 3.85
HOMER3-202ENST00000392351 HNRNPMP52272 730 aaKnown RBP eCLIP39.08■■■■□ 3.85
HOMER3-202ENST00000392351 ZNF518AQ6AHZ1 1483 aa39.07■■■■□ 3.85
HOMER3-202ENST00000392351 TRAPPC8Q9Y2L5 1435 aa39.06■■■■□ 3.84
HOMER3-202ENST00000392351 TCOF1Q13428 1488 aaKnown RBP39.05■■■■□ 3.84
HOMER3-202ENST00000392351 MBD5Q9P267 1494 aa39.03■■■■□ 3.84
HOMER3-202ENST00000392351 KDM5CP41229 1560 aa39.01■■■■□ 3.84
HOMER3-202ENST00000392351 AFAP1Q8N556 730 aa39.01■■■■□ 3.84
HOMER3-202ENST00000392351 ZMYM4Q5VZL5 1548 aa38.99■■■■□ 3.83
HOMER3-202ENST00000392351 ARHGEF5Q12774 1597 aa38.99■■■■□ 3.83
HOMER3-202ENST00000392351 CCDC141Q6ZP82 1450 aa38.96■■■■□ 3.83
HOMER3-202ENST00000392351 FAM50AQ14320 339 aaKnown RBP38.95■■■■□ 3.83
HOMER3-202ENST00000392351 HECW2Q9P2P5 1572 aa38.93■■■■□ 3.82
HOMER3-202ENST00000392351 RRBP1Q9P2E9 1410 aaKnown RBP38.91■■■■□ 3.82
HOMER3-202ENST00000392351 RSPH4AQ5TD94 716 aa38.9■■■■□ 3.82
HOMER3-202ENST00000392351 DNMT1P26358 1616 aaKnown RBP38.9■■■■□ 3.82
HOMER3-202ENST00000392351 MAGI2Q86UL8 1455 aa38.87■■■■□ 3.81
HOMER3-202ENST00000392351 CROCC2H7BZ55 1655 aa38.86■■■■□ 3.81
HOMER3-202ENST00000392351 MLH3Q9UHC1 1453 aa38.86■■■■□ 3.81
HOMER3-202ENST00000392351 ZFYVE16Q7Z3T8 1539 aa38.86■■■■□ 3.81
HOMER3-202ENST00000392351 KIDINS220Q9ULH0 1771 aa38.85■■■■□ 3.81
HOMER3-202ENST00000392351 MYT1LQ9UL68 1186 aa38.85■■■■□ 3.81
HOMER3-202ENST00000392351 INO80Q9ULG1 1556 aaPredicted RBP38.85■■■■□ 3.81
HOMER3-202ENST00000392351 SPAG9O60271 1321 aaKnown RBP38.85■■■■□ 3.81
HOMER3-202ENST00000392351 ARHGEF40Q8TER5 1519 aa38.84■■■■□ 3.81
HOMER3-202ENST00000392351 DAPK1P53355 1430 aa38.82■■■■□ 3.81
HOMER3-202ENST00000392351 ATP7AQ04656 1500 aa38.82■■■■□ 3.81
HOMER3-202ENST00000392351 YEATS2Q9ULM3 1422 aa38.82■■■■□ 3.8
HOMER3-202ENST00000392351 ABCC5O15440 1437 aa38.81■■■■□ 3.8
HOMER3-202ENST00000392351 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.81■■■■□ 3.8
HOMER3-202ENST00000392351 TSPY4P0CV99 314 aa38.78■■■■□ 3.8
HOMER3-202ENST00000392351 TSPY10P0CW01 314 aa38.78■■■■□ 3.8
HOMER3-202ENST00000392351 ABCA6Q8N139 1617 aa38.78■■■■□ 3.8
HOMER3-202ENST00000392351 MAST1Q9Y2H9 1570 aa38.76■■■■□ 3.8
HOMER3-202ENST00000392351 SHANK2Q9UPX8 1470 aa38.75■■■■□ 3.79
HOMER3-202ENST00000392351 C9orf84Q5VXU9 1444 aa38.75■■■■□ 3.79
HOMER3-202ENST00000392351 RTEL1-TNFRSF6BF6WH68 1400 aa38.74■■■■□ 3.79
HOMER3-202ENST00000392351 DIP2CQ9Y2E4 1556 aa38.74■■■■□ 3.79
HOMER3-202ENST00000392351 ATP10AO60312 1499 aa38.67■■■■□ 3.78
HOMER3-202ENST00000392351 ITGAEP38570 1179 aa38.66■■■■□ 3.78
HOMER3-202ENST00000392351 ADGBQ8N7X0 1667 aa38.65■■■■□ 3.78
HOMER3-202ENST00000392351 PLXNC1O60486 1568 aa38.64■■■■□ 3.78
HOMER3-202ENST00000392351 CHIC2Q9UKJ5 165 aa38.63■■■■□ 3.77
HOMER3-202ENST00000392351 PTPRKQ15262 1439 aa38.63■■■■□ 3.77
HOMER3-202ENST00000392351 SIGLEC1Q9BZZ2 1709 aa38.59■■■■□ 3.77
HOMER3-202ENST00000392351 REREQ9P2R6 1566 aa38.58■■■■□ 3.77
HOMER3-202ENST00000392351 ADGRL2O95490 1459 aa38.56■■■■□ 3.76
HOMER3-202ENST00000392351 A2MP01023 1474 aa38.55■■■■□ 3.76
HOMER3-202ENST00000392351 ANKRD30AQ9BXX3 1397 aa38.55■■■■□ 3.76
HOMER3-202ENST00000392351 NCOA1Q15788 1441 aa38.52■■■■□ 3.76
HOMER3-202ENST00000392351 KIF15Q9NS87 1388 aa38.51■■■■□ 3.76
HOMER3-202ENST00000392351 RRP7BPQ9NSQ0 103 aa38.49■■■■□ 3.75
HOMER3-202ENST00000392351 ARID4BQ4LE39 1312 aaPredicted RBP38.48■■■■□ 3.75
HOMER3-202ENST00000392351 DUOX2Q9NRD8 1548 aa38.46■■■■□ 3.75
HOMER3-202ENST00000392351 DHX29Q7Z478 1369 aaKnown RBP38.46■■■■□ 3.75
HOMER3-202ENST00000392351 ROCK1Q13464 1354 aa38.46■■■■□ 3.75
HOMER3-202ENST00000392351 AGLP35573 1532 aa38.44■■■■□ 3.74
HOMER3-202ENST00000392351 BCORL1Q5H9F3 1711 aa38.37■■■■□ 3.73
HOMER3-202ENST00000392351 EIF2AK4Q9P2K8 1649 aaKnown RBP38.36■■■■□ 3.73
HOMER3-202ENST00000392351 ERBINQ96RT1 1412 aa38.35■■■■□ 3.73
HOMER3-202ENST00000392351 GCC2Q8IWJ2 1684 aa38.31■■■■□ 3.72
HOMER3-202ENST00000392351 MLECQ14165 292 aa38.31■■■■□ 3.72
HOMER3-202ENST00000392351 KIF3BO15066 747 aa38.3■■■■□ 3.72
HOMER3-202ENST00000392351 ANKRD50Q9ULJ7 1429 aa38.29■■■■□ 3.72
HOMER3-202ENST00000392351 HFM1A2PYH4 1435 aa38.25■■■■□ 3.71
HOMER3-202ENST00000392351 NAIPQ13075 1403 aa38.24■■■■□ 3.71
HOMER3-202ENST00000392351 RNF17Q9BXT8 1623 aaKnown RBP38.24■■■■□ 3.71
HOMER3-202ENST00000392351 ADAMTSL3P82987 1691 aa38.24■■■■□ 3.71
HOMER3-202ENST00000392351 AEBP2Q6ZN18 517 aaPredicted RBP38.23■■■■□ 3.71
HOMER3-202ENST00000392351 GGT6Q6P531 493 aa38.22■■■■□ 3.71
HOMER3-202ENST00000392351 FER1L4A9Z1Z3 1794 aa38.21■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms