RNA–Protein interactions for RNA: ENST00000392114.6

VIL1-202, Transcript of villin 1, humanhuman

TSL 2 BASIC

Gene VIL1, Length 1,968 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-202ENST00000392114 RIMBP3Q9UFD9 1639 aa17.94■□□□□ 0.46
VIL1-202ENST00000392114 RSPH4AQ5TD94 716 aa17.93■□□□□ 0.46
VIL1-202ENST00000392114 ZNF777Q9ULD5 760 aaPredicted RBP17.93■□□□□ 0.46
VIL1-202ENST00000392114 CDC42BPBQ9Y5S2 1711 aa17.92■□□□□ 0.46
VIL1-202ENST00000392114 DAPK1P53355 1430 aa17.91■□□□□ 0.46
VIL1-202ENST00000392114 AKNAQ7Z591 1439 aa17.91■□□□□ 0.46
VIL1-202ENST00000392114 HFM1A2PYH4 1435 aa17.91■□□□□ 0.46
VIL1-202ENST00000392114 RAB3GAP2Q9H2M9 1393 aa17.9■□□□□ 0.46
VIL1-202ENST00000392114 ASXL2Q76L83 1435 aa17.9■□□□□ 0.46
VIL1-202ENST00000392114 TTC37Q6PGP7 1564 aa17.9■□□□□ 0.46
VIL1-202ENST00000392114 CLSPNQ9HAW4 1339 aa17.9■□□□□ 0.46
VIL1-202ENST00000392114 ZNF644Q9H582 1327 aaPredicted RBP17.89■□□□□ 0.45
VIL1-202ENST00000392114 PLEKHH2Q8IVE3 1493 aa17.89■□□□□ 0.45
VIL1-202ENST00000392114 PLCH2O75038 1416 aa17.89■□□□□ 0.45
VIL1-202ENST00000392114 PTPRKQ15262 1439 aa17.89■□□□□ 0.45
VIL1-202ENST00000392114 ARHGAP5Q13017 1502 aa17.89■□□□□ 0.45
VIL1-202ENST00000392114 ROCK1Q13464 1354 aa17.89■□□□□ 0.45
VIL1-202ENST00000392114 ABCC5O15440 1437 aa17.88■□□□□ 0.45
VIL1-202ENST00000392114 ARAP3Q8WWN8 1544 aa17.88■□□□□ 0.45
VIL1-202ENST00000392114 CYB5RLQ6IPT4 315 aa17.88■□□□□ 0.45
VIL1-202ENST00000392114 EFCAB2Q5VUJ9 269 aa17.87■□□□□ 0.45
VIL1-202ENST00000392114 TSPY4P0CV99 314 aa17.86■□□□□ 0.45
VIL1-202ENST00000392114 TSPY10P0CW01 314 aa17.86■□□□□ 0.45
VIL1-202ENST00000392114 ABCA9Q8IUA7 1624 aa17.86■□□□□ 0.45
VIL1-202ENST00000392114 ARHGEF5Q12774 1597 aa17.85■□□□□ 0.45
VIL1-202ENST00000392114 GCC2Q8IWJ2 1684 aa17.84■□□□□ 0.45
VIL1-202ENST00000392114 CROCC2H7BZ55 1655 aa17.84■□□□□ 0.45
VIL1-202ENST00000392114 CHIC2Q9UKJ5 165 aa17.84■□□□□ 0.45
VIL1-202ENST00000392114 NAIPQ13075 1403 aa17.84■□□□□ 0.45
VIL1-202ENST00000392114 ADGBQ8N7X0 1667 aa17.83■□□□□ 0.45
VIL1-202ENST00000392114 KIAA1107Q9UPP5 1409 aa17.83■□□□□ 0.45
VIL1-202ENST00000392114 SAMD9LQ8IVG5 1584 aa17.83■□□□□ 0.44
VIL1-202ENST00000392114 SHANK2Q9UPX8 1470 aa17.82■□□□□ 0.44
VIL1-202ENST00000392114 DHX57Q6P158 1386 aaKnown RBP17.81■□□□□ 0.44
VIL1-202ENST00000392114 MAPKBP1O60336 1514 aa17.81■□□□□ 0.44
VIL1-202ENST00000392114 ANKRD30AQ9BXX3 1397 aa17.81■□□□□ 0.44
VIL1-202ENST00000392114 RRP7BPQ9NSQ0 103 aa17.8■□□□□ 0.44
VIL1-202ENST00000392114 ADGRL2O95490 1459 aa17.8■□□□□ 0.44
VIL1-202ENST00000392114 CCDC141Q6ZP82 1450 aa17.8■□□□□ 0.44
VIL1-202ENST00000392114 HNRNPMP52272 730 aaKnown RBP eCLIP17.79■□□□□ 0.44
VIL1-202ENST00000392114 MBD5Q9P267 1494 aa17.78■□□□□ 0.44
VIL1-202ENST00000392114 NCOA1Q15788 1441 aa17.77■□□□□ 0.43
VIL1-202ENST00000392114 C9orf84Q5VXU9 1444 aa17.76■□□□□ 0.43
VIL1-202ENST00000392114 SYCP2Q9BX26 1530 aa17.75■□□□□ 0.43
VIL1-202ENST00000392114 FANCAO15360 1455 aa17.74■□□□□ 0.43
VIL1-202ENST00000392114 CFAP74Q9C0B2 1584 aa17.74■□□□□ 0.43
VIL1-202ENST00000392114 MAST1Q9Y2H9 1570 aa17.73■□□□□ 0.43
VIL1-202ENST00000392114 ABCC1P33527 1531 aa17.73■□□□□ 0.43
VIL1-202ENST00000392114 CD109Q6YHK3 1445 aa17.72■□□□□ 0.43
VIL1-202ENST00000392114 GLI2P10070 1586 aa17.69■□□□□ 0.42
VIL1-202ENST00000392114 TRIM52Q96A61 297 aa17.68■□□□□ 0.42
VIL1-202ENST00000392114 ANKRD50Q9ULJ7 1429 aa17.67■□□□□ 0.42
VIL1-202ENST00000392114 ADGRL1O94910 1474 aa17.66■□□□□ 0.42
VIL1-202ENST00000392114 ARHGEF12Q9NZN5 1544 aa17.65■□□□□ 0.42
VIL1-202ENST00000392114 PLXNC1O60486 1568 aa17.65■□□□□ 0.42
VIL1-202ENST00000392114 KIF15Q9NS87 1388 aa17.65■□□□□ 0.42
VIL1-202ENST00000392114 RTEL1-TNFRSF6BF6WH68 1400 aa17.65■□□□□ 0.42
VIL1-202ENST00000392114 SCAPERQ9BY12 1400 aa17.63■□□□□ 0.41
VIL1-202ENST00000392114 NEO1Q92859 1461 aa17.63■□□□□ 0.41
VIL1-202ENST00000392114 MAP3K4Q9Y6R4 1608 aa17.63■□□□□ 0.41
VIL1-202ENST00000392114 SPAG9O60271 1321 aaKnown RBP17.63■□□□□ 0.41
VIL1-202ENST00000392114 KDM6BO15054 1643 aa17.63■□□□□ 0.41
VIL1-202ENST00000392114 TRAPPC8Q9Y2L5 1435 aa17.62■□□□□ 0.41
VIL1-202ENST00000392114 TIMELESSQ9UNS1 1208 aa17.61■□□□□ 0.41
VIL1-202ENST00000392114 DUOX2Q9NRD8 1548 aa17.6■□□□□ 0.41
VIL1-202ENST00000392114 MPHOSPH9Q99550 1183 aa17.6■□□□□ 0.41
VIL1-202ENST00000392114 FAM69CQ0P6D2 419 aa17.59■□□□□ 0.41
VIL1-202ENST00000392114 DIP2BQ9P265 1576 aa17.59■□□□□ 0.41
VIL1-202ENST00000392114 ZNF518AQ6AHZ1 1483 aa17.59■□□□□ 0.41
VIL1-202ENST00000392114 AFAP1Q8N556 730 aa17.58■□□□□ 0.4
VIL1-202ENST00000392114 ERBINQ96RT1 1412 aa17.57■□□□□ 0.4
VIL1-202ENST00000392114 SLC4A1APQ9BWU0 796 aaKnown RBP17.56■□□□□ 0.4
VIL1-202ENST00000392114 MYT1LQ9UL68 1186 aa17.56■□□□□ 0.4
VIL1-202ENST00000392114 TEX14Q8IWB6 1497 aa17.55■□□□□ 0.4
VIL1-202ENST00000392114 ATP7AQ04656 1500 aa17.55■□□□□ 0.4
VIL1-202ENST00000392114 ZFYVE16Q7Z3T8 1539 aa17.54■□□□□ 0.4
VIL1-202ENST00000392114 INO80Q9ULG1 1556 aaPredicted RBP17.54■□□□□ 0.4
VIL1-202ENST00000392114 KDM5DQ9BY66 1539 aa17.53■□□□□ 0.4
VIL1-202ENST00000392114 POGZQ7Z3K3 1410 aa17.52■□□□□ 0.4
VIL1-202ENST00000392114 DENND4BO75064 1496 aaPredicted RBP17.52■□□□□ 0.4
VIL1-202ENST00000392114 NUP155O75694 1391 aa17.52■□□□□ 0.4
VIL1-202ENST00000392114 KDM5CP41229 1560 aa17.5■□□□□ 0.39
VIL1-202ENST00000392114 MLH3Q9UHC1 1453 aa17.5■□□□□ 0.39
VIL1-202ENST00000392114 NEUROD1Q13562 356 aa17.49■□□□□ 0.39
VIL1-202ENST00000392114 PZPP20742 1482 aa17.49■□□□□ 0.39
VIL1-202ENST00000392114 UNC13BO14795 1591 aa17.49■□□□□ 0.39
VIL1-202ENST00000392114 KIF13AQ9H1H9 1805 aa17.48■□□□□ 0.39
VIL1-202ENST00000392114 TSPOAP1O95153 1857 aa17.48■□□□□ 0.39
VIL1-202ENST00000392114 SIN3AQ96ST3 1273 aa17.48■□□□□ 0.39
VIL1-202ENST00000392114 KIDINS220Q9ULH0 1771 aa17.47■□□□□ 0.39
VIL1-202ENST00000392114 HECW2Q9P2P5 1572 aa17.47■□□□□ 0.39
VIL1-202ENST00000392114 DHX29Q7Z478 1369 aaKnown RBP17.46■□□□□ 0.39
VIL1-202ENST00000392114 EIF2AK4Q9P2K8 1649 aaKnown RBP17.46■□□□□ 0.39
VIL1-202ENST00000392114 TONSLQ96HA7 1378 aa17.46■□□□□ 0.38
VIL1-202ENST00000392114 PKD2Q13563 968 aa17.44■□□□□ 0.38
VIL1-202ENST00000392114 RICTORQ6R327 1708 aa17.44■□□□□ 0.38
VIL1-202ENST00000392114 ANKRD30BQ9BXX2 1392 aa17.44■□□□□ 0.38
VIL1-202ENST00000392114 PPRC1Q5VV67 1664 aaKnown RBP17.43■□□□□ 0.38
VIL1-202ENST00000392114 IQGAP3Q86VI3 1631 aa17.43■□□□□ 0.38
VIL1-202ENST00000392114 FAM135AQ9P2D6 1515 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms