RNA–Protein interactions for RNA: ENST00000391763.3

NDUFA3-203, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-203ENST00000391763 EFCAB2Q5VUJ9 269 aa23.8■■□□□ 1.4
NDUFA3-203ENST00000391763 NEO1Q92859 1461 aa23.8■■□□□ 1.4
NDUFA3-203ENST00000391763 FANCAO15360 1455 aa23.79■■□□□ 1.4
NDUFA3-203ENST00000391763 GPATCH8Q9UKJ3 1502 aaKnown RBP23.79■■□□□ 1.4
NDUFA3-203ENST00000391763 CDC42BPBQ9Y5S2 1711 aa23.79■■□□□ 1.4
NDUFA3-203ENST00000391763 CFDP1Q9UEE9 299 aaPredicted RBP23.76■■□□□ 1.39
NDUFA3-203ENST00000391763 MYOM3Q5VTT5 1437 aa23.73■■□□□ 1.39
NDUFA3-203ENST00000391763 AKNAQ7Z591 1439 aa23.72■■□□□ 1.39
NDUFA3-203ENST00000391763 MIA2Q96PC5 1412 aa23.69■■□□□ 1.38
NDUFA3-203ENST00000391763 PLEKHH2Q8IVE3 1493 aa23.68■■□□□ 1.38
NDUFA3-203ENST00000391763 PPARGC1BQ86YN6 1023 aaKnown RBP23.68■■□□□ 1.38
NDUFA3-203ENST00000391763 ZNF777Q9ULD5 760 aaPredicted RBP23.68■■□□□ 1.38
NDUFA3-203ENST00000391763 KDM6BO15054 1643 aa23.68■■□□□ 1.38
NDUFA3-203ENST00000391763 ADGRL1O94910 1474 aa23.68■■□□□ 1.38
NDUFA3-203ENST00000391763 SAMD9LQ8IVG5 1584 aa23.63■■□□□ 1.37
NDUFA3-203ENST00000391763 DENND4BO75064 1496 aaPredicted RBP23.62■■□□□ 1.37
NDUFA3-203ENST00000391763 SCAPERQ9BY12 1400 aa23.62■■□□□ 1.37
NDUFA3-203ENST00000391763 ABCC1P33527 1531 aa23.62■■□□□ 1.37
NDUFA3-203ENST00000391763 FGD6Q6ZV73 1430 aa23.61■■□□□ 1.37
NDUFA3-203ENST00000391763 KIAA1107Q9UPP5 1409 aa23.61■■□□□ 1.37
NDUFA3-203ENST00000391763 CAMSAP2Q08AD1 1489 aa23.6■■□□□ 1.37
NDUFA3-203ENST00000391763 PTPN23Q9H3S7 1636 aa23.59■■□□□ 1.37
NDUFA3-203ENST00000391763 RSPH4AQ5TD94 716 aa23.57■■□□□ 1.36
NDUFA3-203ENST00000391763 ZNF518AQ6AHZ1 1483 aa23.56■■□□□ 1.36
NDUFA3-203ENST00000391763 SYCP2Q9BX26 1530 aa23.56■■□□□ 1.36
NDUFA3-203ENST00000391763 POGZQ7Z3K3 1410 aa23.55■■□□□ 1.36
NDUFA3-203ENST00000391763 RICTORQ6R327 1708 aa23.55■■□□□ 1.36
NDUFA3-203ENST00000391763 TCOF1Q13428 1488 aaKnown RBP23.54■■□□□ 1.36
NDUFA3-203ENST00000391763 COL17A1Q9UMD9 1497 aaPredicted RBP23.54■■□□□ 1.36
NDUFA3-203ENST00000391763 ZNF644Q9H582 1327 aaPredicted RBP23.54■■□□□ 1.36
NDUFA3-203ENST00000391763 RAPGEF3O95398 923 aa23.52■■□□□ 1.36
NDUFA3-203ENST00000391763 HNRNPMP52272 730 aaKnown RBP eCLIP23.52■■□□□ 1.36
NDUFA3-203ENST00000391763 ARHGEF12Q9NZN5 1544 aa23.51■■□□□ 1.35
NDUFA3-203ENST00000391763 ARHGEF5Q12774 1597 aa23.51■■□□□ 1.35
NDUFA3-203ENST00000391763 FAM50AQ14320 339 aaKnown RBP23.49■■□□□ 1.35
NDUFA3-203ENST00000391763 CCDC141Q6ZP82 1450 aa23.49■■□□□ 1.35
NDUFA3-203ENST00000391763 MBD5Q9P267 1494 aa23.49■■□□□ 1.35
NDUFA3-203ENST00000391763 FRMPD1Q5SYB0 1578 aa23.48■■□□□ 1.35
NDUFA3-203ENST00000391763 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.48■■□□□ 1.352e-6■■■■□ 19.8
NDUFA3-203ENST00000391763 TRAPPC8Q9Y2L5 1435 aa23.48■■□□□ 1.35
NDUFA3-203ENST00000391763 ZMYM4Q5VZL5 1548 aa23.48■■□□□ 1.35
NDUFA3-203ENST00000391763 KDM5CP41229 1560 aa23.48■■□□□ 1.35
NDUFA3-203ENST00000391763 MAGI2Q86UL8 1455 aa23.47■■□□□ 1.35
NDUFA3-203ENST00000391763 TSPY4P0CV99 314 aa23.46■■□□□ 1.35
NDUFA3-203ENST00000391763 TSPY10P0CW01 314 aa23.46■■□□□ 1.35
NDUFA3-203ENST00000391763 AFAP1Q8N556 730 aa23.46■■□□□ 1.35
NDUFA3-203ENST00000391763 RRBP1Q9P2E9 1410 aaKnown RBP23.46■■□□□ 1.35
NDUFA3-203ENST00000391763 MYT1LQ9UL68 1186 aa23.45■■□□□ 1.34
NDUFA3-203ENST00000391763 HECW2Q9P2P5 1572 aa23.44■■□□□ 1.34
NDUFA3-203ENST00000391763 SPAG9O60271 1321 aaKnown RBP23.43■■□□□ 1.34
NDUFA3-203ENST00000391763 DNMT1P26358 1616 aaKnown RBP23.43■■□□□ 1.34
NDUFA3-203ENST00000391763 MLH3Q9UHC1 1453 aa23.43■■□□□ 1.34
NDUFA3-203ENST00000391763 ZFYVE16Q7Z3T8 1539 aa23.4■■□□□ 1.34
NDUFA3-203ENST00000391763 RTEL1-TNFRSF6BF6WH68 1400 aa23.4■■□□□ 1.34
NDUFA3-203ENST00000391763 CROCC2H7BZ55 1655 aa23.39■■□□□ 1.34
NDUFA3-203ENST00000391763 DAPK1P53355 1430 aa23.39■■□□□ 1.33
NDUFA3-203ENST00000391763 SHANK2Q9UPX8 1470 aa23.38■■□□□ 1.33
NDUFA3-203ENST00000391763 ATP7AQ04656 1500 aa23.38■■□□□ 1.33
NDUFA3-203ENST00000391763 INO80Q9ULG1 1556 aaPredicted RBP23.37■■□□□ 1.33
NDUFA3-203ENST00000391763 MAST1Q9Y2H9 1570 aa23.37■■□□□ 1.33
NDUFA3-203ENST00000391763 ABCC5O15440 1437 aa23.36■■□□□ 1.33
NDUFA3-203ENST00000391763 ARHGEF40Q8TER5 1519 aa23.36■■□□□ 1.33
NDUFA3-203ENST00000391763 KIDINS220Q9ULH0 1771 aa23.35■■□□□ 1.33
NDUFA3-203ENST00000391763 C9orf84Q5VXU9 1444 aa23.34■■□□□ 1.33
NDUFA3-203ENST00000391763 ATP10AO60312 1499 aa23.3■■□□□ 1.32
NDUFA3-203ENST00000391763 ADGBQ8N7X0 1667 aa23.3■■□□□ 1.32
NDUFA3-203ENST00000391763 YEATS2Q9ULM3 1422 aa23.3■■□□□ 1.32
NDUFA3-203ENST00000391763 ABCA6Q8N139 1617 aa23.3■■□□□ 1.32
NDUFA3-203ENST00000391763 DIP2CQ9Y2E4 1556 aa23.29■■□□□ 1.32
NDUFA3-203ENST00000391763 ANKRD30AQ9BXX3 1397 aa23.28■■□□□ 1.32
NDUFA3-203ENST00000391763 PLXNC1O60486 1568 aa23.28■■□□□ 1.32
NDUFA3-203ENST00000391763 ITGAEP38570 1179 aa23.28■■□□□ 1.32
NDUFA3-203ENST00000391763 REREQ9P2R6 1566 aa23.27■■□□□ 1.32
NDUFA3-203ENST00000391763 ADGRL2O95490 1459 aa23.25■■□□□ 1.31
NDUFA3-203ENST00000391763 CHIC2Q9UKJ5 165 aa23.25■■□□□ 1.31
NDUFA3-203ENST00000391763 ROCK1Q13464 1354 aa23.23■■□□□ 1.31
NDUFA3-203ENST00000391763 A2MP01023 1474 aa23.23■■□□□ 1.31
NDUFA3-203ENST00000391763 NCOA1Q15788 1441 aa23.21■■□□□ 1.31
NDUFA3-203ENST00000391763 DUOX2Q9NRD8 1548 aa23.21■■□□□ 1.31
NDUFA3-203ENST00000391763 PTPRKQ15262 1439 aa23.2■■□□□ 1.3
NDUFA3-203ENST00000391763 KIF15Q9NS87 1388 aa23.2■■□□□ 1.3
NDUFA3-203ENST00000391763 DHX29Q7Z478 1369 aaKnown RBP23.19■■□□□ 1.3
NDUFA3-203ENST00000391763 ARID4BQ4LE39 1312 aaPredicted RBP23.19■■□□□ 1.3
NDUFA3-203ENST00000391763 RRP7BPQ9NSQ0 103 aa23.18■■□□□ 1.3
NDUFA3-203ENST00000391763 AGLP35573 1532 aa23.18■■□□□ 1.3
NDUFA3-203ENST00000391763 EIF2AK4Q9P2K8 1649 aaKnown RBP23.14■■□□□ 1.29
NDUFA3-203ENST00000391763 ERBINQ96RT1 1412 aa23.14■■□□□ 1.29
NDUFA3-203ENST00000391763 BCORL1Q5H9F3 1711 aa23.11■■□□□ 1.29
NDUFA3-203ENST00000391763 TRIM26Q12899 539 aaPredicted RBP23.11■■□□□ 1.29
NDUFA3-203ENST00000391763 ANKRD50Q9ULJ7 1429 aa23.09■■□□□ 1.29
NDUFA3-203ENST00000391763 GCC2Q8IWJ2 1684 aa23.09■■□□□ 1.29
NDUFA3-203ENST00000391763 SIGLEC1Q9BZZ2 1709 aa23.08■■□□□ 1.29
NDUFA3-203ENST00000391763 KIF3BO15066 747 aa23.08■■□□□ 1.29
NDUFA3-203ENST00000391763 HFM1A2PYH4 1435 aa23.08■■□□□ 1.28
NDUFA3-203ENST00000391763 PPP6R1Q9UPN7 881 aa23.04■■□□□ 1.28
NDUFA3-203ENST00000391763 NAIPQ13075 1403 aa23.04■■□□□ 1.28
NDUFA3-203ENST00000391763 MLECQ14165 292 aa23.03■■□□□ 1.28
NDUFA3-203ENST00000391763 ESF1Q9H501 851 aaKnown RBP23.03■■□□□ 1.28
NDUFA3-203ENST00000391763 RNF17Q9BXT8 1623 aaKnown RBP23.03■■□□□ 1.28
NDUFA3-203ENST00000391763 GGT6Q6P531 493 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms