RNA–Protein interactions for RNA: ENST00000391066.1

RNU6-1000P-201, Transcript of RNA, U6 small nuclear 1000, pseudogene, humanhuman

BASIC

Gene RNU6-1000P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1000P-201ENST00000391066 CRISPLD2Q9H0B8 497 aa12.94□□□□□ -0.34
RNU6-1000P-201ENST00000391066 PDE4AP27815 886 aa12.93□□□□□ -0.34
RNU6-1000P-201ENST00000391066 TMEM92Q6UXU6 159 aa12.91□□□□□ -0.34
RNU6-1000P-201ENST00000391066 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.91□□□□□ -0.34
RNU6-1000P-201ENST00000391066 MAMSTRQ6ZN01 415 aa12.9□□□□□ -0.34
RNU6-1000P-201ENST00000391066 GPHNQ9NQX3 736 aaPredicted RBP12.9□□□□□ -0.34
RNU6-1000P-201ENST00000391066 KIF3CO14782 793 aa12.88□□□□□ -0.35
RNU6-1000P-201ENST00000391066 LHX8Q68G74 356 aa12.88□□□□□ -0.35
RNU6-1000P-201ENST00000391066 TMC2Q8TDI7 906 aa12.88□□□□□ -0.35
RNU6-1000P-201ENST00000391066 LARP6Q9BRS8 491 aaKnown RBP12.88□□□□□ -0.35
RNU6-1000P-201ENST00000391066 C2orf72A6NCS6 295 aa12.87□□□□□ -0.35
RNU6-1000P-201ENST00000391066 MFSD10Q14728 455 aa12.86□□□□□ -0.35
RNU6-1000P-201ENST00000391066 SCUBE2Q9NQ36 999 aa12.86□□□□□ -0.35
RNU6-1000P-201ENST00000391066 WDR70Q9NW82 654 aa12.84□□□□□ -0.35
RNU6-1000P-201ENST00000391066 DDX27Q96GQ7 796 aaKnown RBP12.83□□□□□ -0.36
RNU6-1000P-201ENST00000391066 FOXK1P85037 733 aa12.82□□□□□ -0.36
RNU6-1000P-201ENST00000391066 DSG2Q14126 1118 aa12.81□□□□□ -0.36
RNU6-1000P-201ENST00000391066 OTUD5Q96G74 571 aa12.81□□□□□ -0.36
RNU6-1000P-201ENST00000391066 PPP1R15BQ5SWA1 713 aa12.79□□□□□ -0.36
RNU6-1000P-201ENST00000391066 SLAIN1Q8ND83 568 aa12.79□□□□□ -0.36
RNU6-1000P-201ENST00000391066 PLPP6Q8IY26 295 aa12.76□□□□□ -0.37
RNU6-1000P-201ENST00000391066 E2F4Q16254 413 aa12.73□□□□□ -0.37
RNU6-1000P-201ENST00000391066 CAMK2BQ13554 666 aa12.72□□□□□ -0.37
RNU6-1000P-201ENST00000391066 P3H3Q8IVL6 736 aa12.67□□□□□ -0.38
RNU6-1000P-201ENST00000391066 KCNV2Q8TDN2 545 aa12.67□□□□□ -0.38
RNU6-1000P-201ENST00000391066 EMILIN3Q9NT22 766 aa12.65□□□□□ -0.38
RNU6-1000P-201ENST00000391066 SLC34A2O95436 690 aa12.63□□□□□ -0.39
RNU6-1000P-201ENST00000391066 HOXB3P14651 431 aaPredicted RBP12.62□□□□□ -0.39
RNU6-1000P-201ENST00000391066 ARIH1Q9Y4X5 557 aaPredicted RBP12.62□□□□□ -0.39
RNU6-1000P-201ENST00000391066 ARHGEF1Q92888 912 aaKnown RBP12.61□□□□□ -0.39
RNU6-1000P-201ENST00000391066 OXER1Q8TDS5 423 aa12.6□□□□□ -0.39
RNU6-1000P-201ENST00000391066 PTCD2Q8WV60 388 aaKnown RBP12.6□□□□□ -0.39
RNU6-1000P-201ENST00000391066 SNPHO15079 494 aa12.59□□□□□ -0.39
RNU6-1000P-201ENST00000391066 DOK7Q18PE1 504 aa12.59□□□□□ -0.39
RNU6-1000P-201ENST00000391066 UPF1Q92900 1129 aaKnown RBP eCLIP12.57□□□□□ -0.4
RNU6-1000P-201ENST00000391066 DPYSL4O14531 572 aa12.55□□□□□ -0.4
RNU6-1000P-201ENST00000391066 TBC1D12O60347 775 aa12.54□□□□□ -0.4
RNU6-1000P-201ENST00000391066 MAP3K9P80192 1104 aa12.54□□□□□ -0.4
RNU6-1000P-201ENST00000391066 PCDHGA4Q9Y5G9 962 aa12.54□□□□□ -0.4
RNU6-1000P-201ENST00000391066 ZSWIM6Q9HCJ5 1215 aa12.53□□□□□ -0.4
RNU6-1000P-201ENST00000391066 RIMBP2O15034 1052 aa12.52□□□□□ -0.41
RNU6-1000P-201ENST00000391066 ZNF710Q8N1W2 664 aa12.51□□□□□ -0.41
RNU6-1000P-201ENST00000391066 GPR153Q6NV75 609 aa12.5□□□□□ -0.41
RNU6-1000P-201ENST00000391066 SPDYE16A6NNV3 312 aaPredicted RBP12.48□□□□□ -0.41
RNU6-1000P-201ENST00000391066 PDIA6Q15084 440 aa12.48□□□□□ -0.41
RNU6-1000P-201ENST00000391066 ARSIQ5FYB1 569 aa12.48□□□□□ -0.41
RNU6-1000P-201ENST00000391066 EVI5O60447 810 aa12.46□□□□□ -0.41
RNU6-1000P-201ENST00000391066 NBR1Q14596 966 aa12.46□□□□□ -0.41
RNU6-1000P-201ENST00000391066 KDM4FA0A1W2PPD8 638 aa12.45□□□□□ -0.42
RNU6-1000P-201ENST00000391066 KHSRPQ92945 711 aaKnown RBP eCLIP12.45□□□□□ -0.42
RNU6-1000P-201ENST00000391066 BCANQ96GW7 911 aa12.45□□□□□ -0.42
RNU6-1000P-201ENST00000391066 HOXB1P14653 301 aaPredicted RBP12.44□□□□□ -0.42
RNU6-1000P-201ENST00000391066 ANO8Q9HCE9 1232 aaPredicted RBP12.44□□□□□ -0.42
RNU6-1000P-201ENST00000391066 SEMA3EO15041 775 aa12.42□□□□□ -0.42
RNU6-1000P-201ENST00000391066 ST18O60284 1047 aa12.41□□□□□ -0.42
RNU6-1000P-201ENST00000391066 NUDT7P0C024 238 aa12.41□□□□□ -0.42
RNU6-1000P-201ENST00000391066 FAM163AQ96GL9 167 aaPredicted RBP12.4□□□□□ -0.42
RNU6-1000P-201ENST00000391066 ZNF316A6NFI3 1004 aaPredicted RBP12.39□□□□□ -0.43
RNU6-1000P-201ENST00000391066 TESPA1A2RU30 521 aaPredicted RBP12.38□□□□□ -0.43
RNU6-1000P-201ENST00000391066 PTGER2P43116 358 aa12.38□□□□□ -0.43
RNU6-1000P-201ENST00000391066 MLLT3P42568 568 aaPredicted RBP12.35□□□□□ -0.43
RNU6-1000P-201ENST00000391066 LCE2DQ5TA82 110 aaPredicted RBP12.34□□□□□ -0.43
RNU6-1000P-201ENST00000391066 LHX6Q9UPM6 363 aa12.33□□□□□ -0.44
RNU6-1000P-201ENST00000391066 DDX12PQ92771 950 aa12.31□□□□□ -0.44
RNU6-1000P-201ENST00000391066 GRXCR2A6NFK2 248 aa12.3□□□□□ -0.44
RNU6-1000P-201ENST00000391066 SMYD5Q6GMV2 418 aa12.3□□□□□ -0.44
RNU6-1000P-201ENST00000391066 PHF14O94880 888 aa12.29□□□□□ -0.44
RNU6-1000P-201ENST00000391066 FOSBP53539 338 aa12.29□□□□□ -0.44
RNU6-1000P-201ENST00000391066 MARVELD3Q96A59 401 aa12.29□□□□□ -0.44
RNU6-1000P-201ENST00000391066 JPH4Q96JJ6 628 aa12.28□□□□□ -0.44
RNU6-1000P-201ENST00000391066 PCDHGA10Q9Y5H3 936 aa12.28□□□□□ -0.44
RNU6-1000P-201ENST00000391066 OSBPP22059 807 aa12.27□□□□□ -0.45
RNU6-1000P-201ENST00000391066 EMP3P54852 163 aa12.27□□□□□ -0.45
RNU6-1000P-201ENST00000391066 PSDA5PKW4 1024 aaPredicted RBP12.26□□□□□ -0.45
RNU6-1000P-201ENST00000391066 EPAS1Q99814 870 aa12.26□□□□□ -0.45
RNU6-1000P-201ENST00000391066 TULP1O00294 542 aaPredicted RBP12.25□□□□□ -0.45
RNU6-1000P-201ENST00000391066 ZNF454Q8N9F8 522 aa12.25□□□□□ -0.45
RNU6-1000P-201ENST00000391066 ERBB3P21860 1342 aa12.24□□□□□ -0.45
RNU6-1000P-201ENST00000391066 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.24□□□□□ -0.45
RNU6-1000P-201ENST00000391066 TYW1BQ6NUM6 668 aa12.23□□□□□ -0.45
RNU6-1000P-201ENST00000391066 PRIM1P49642 420 aaKnown RBP12.22□□□□□ -0.45
RNU6-1000P-201ENST00000391066 FAM205CA6NFA0 338 aa12.21□□□□□ -0.45
RNU6-1000P-201ENST00000391066 PPP4R3BQ5MIZ7 849 aa12.21□□□□□ -0.45
RNU6-1000P-201ENST00000391066 VARS2Q5ST30 1063 aaKnown RBP12.21□□□□□ -0.45
RNU6-1000P-201ENST00000391066 FBXW7Q969H0 707 aa12.21□□□□□ -0.45
RNU6-1000P-201ENST00000391066 ZDHHC16Q969W1 377 aa12.21□□□□□ -0.45
RNU6-1000P-201ENST00000391066 EN1Q05925 392 aaPredicted RBP12.19□□□□□ -0.46
RNU6-1000P-201ENST00000391066 RBM26Q5T8P6 1007 aaKnown RBP12.19□□□□□ -0.46
RNU6-1000P-201ENST00000391066 LMOD2Q6P5Q4 547 aa12.19□□□□□ -0.46
RNU6-1000P-201ENST00000391066 POTEB3A0JP26 581 aa12.17□□□□□ -0.46
RNU6-1000P-201ENST00000391066 POTEBQ6S5H4 581 aa12.17□□□□□ -0.46
RNU6-1000P-201ENST00000391066 HS3ST6Q96QI5 342 aa12.17□□□□□ -0.46
RNU6-1000P-201ENST00000391066 ADAM33Q9BZ11 813 aa12.17□□□□□ -0.46
RNU6-1000P-201ENST00000391066 RBM33Q96EV2 1170 aaKnown RBP12.16□□□□□ -0.46
RNU6-1000P-201ENST00000391066 BCL2L12Q9HB09 334 aa12.15□□□□□ -0.46
RNU6-1000P-201ENST00000391066 MAP3K7O43318 606 aa12.14□□□□□ -0.47
RNU6-1000P-201ENST00000391066 C6orf132Q5T0Z8 1188 aa12.13□□□□□ -0.47
RNU6-1000P-201ENST00000391066 ZNF687Q8N1G0 1237 aa12.13□□□□□ -0.47
RNU6-1000P-201ENST00000391066 TSR1Q2NL82 804 aaKnown RBP12.12□□□□□ -0.47
RNU6-1000P-201ENST00000391066 NUTM2FA1L443 756 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms