RNA–Protein interactions for RNA: ENST00000390884.1

RNU6-258P-201, Transcript of RNA, U6 small nuclear 258, pseudogene, humanhuman

BASIC

Gene RNU6-258P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-258P-201ENST00000390884 RNF225M0QZC1 329 aaPredicted RBP1.41□□□□□ -2.18
RNU6-258P-201ENST00000390884 NFX1Q12986 1120 aaKnown RBP1.41□□□□□ -2.18
RNU6-258P-201ENST00000390884 FOXK2Q01167 660 aa1.4□□□□□ -2.19
RNU6-258P-201ENST00000390884 RASSF7Q02833 373 aa1.4□□□□□ -2.19
RNU6-258P-201ENST00000390884 FZD5Q13467 585 aa1.4□□□□□ -2.19
RNU6-258P-201ENST00000390884 PKDCCQ504Y2 493 aa1.4□□□□□ -2.19
RNU6-258P-201ENST00000390884 NCBP3Q53F19 620 aaKnown RBP1.4□□□□□ -2.19
RNU6-258P-201ENST00000390884 PBX2P40425 430 aa1.38□□□□□ -2.19
RNU6-258P-201ENST00000390884 OCEL1Q9H607 264 aa1.38□□□□□ -2.19
RNU6-258P-201ENST00000390884 FBLN2P98095 1184 aa1.36□□□□□ -2.19
RNU6-258P-201ENST00000390884 SLC16A10Q8TF71 515 aa1.36□□□□□ -2.19
RNU6-258P-201ENST00000390884 PRKD2Q9BZL6 878 aa1.36□□□□□ -2.19
RNU6-258P-201ENST00000390884 SSUH2Q9Y2M2 353 aa1.36□□□□□ -2.19
RNU6-258P-201ENST00000390884 DNMT3AQ9Y6K1 912 aaPredicted RBP1.36□□□□□ -2.19
RNU6-258P-201ENST00000390884 ARID1BQ8NFD5 2236 aaPredicted RBP1.36□□□□□ -2.19
RNU6-258P-201ENST00000390884 C11orf95C9JLR9 678 aaPredicted RBP1.35□□□□□ -2.19
RNU6-258P-201ENST00000390884 K7ELQ4 463 aaPredicted RBP1.35□□□□□ -2.19
RNU6-258P-201ENST00000390884 PSPNO60542 156 aa1.35□□□□□ -2.19
RNU6-258P-201ENST00000390884 HOXB3P14651 431 aaPredicted RBP1.35□□□□□ -2.19
RNU6-258P-201ENST00000390884 TXKP42681 527 aa1.35□□□□□ -2.19
RNU6-258P-201ENST00000390884 MYT1Q01538 1121 aa1.35□□□□□ -2.19
RNU6-258P-201ENST00000390884 ADGRD1Q6QNK2 874 aa1.35□□□□□ -2.19
RNU6-258P-201ENST00000390884 PABPN1Q86U42 306 aaKnown RBP eCLIP1.35□□□□□ -2.19
RNU6-258P-201ENST00000390884 L3MBTL3Q96JM7 780 aaPredicted RBP1.35□□□□□ -2.19
RNU6-258P-201ENST00000390884 WDR26Q9H7D7 661 aa1.35□□□□□ -2.19
RNU6-258P-201ENST00000390884 TRPC6Q9Y210 931 aa1.35□□□□□ -2.19
RNU6-258P-201ENST00000390884 TERTO14746 1132 aaKnown RBP1.34□□□□□ -2.19
RNU6-258P-201ENST00000390884 DGAT1O75907 488 aa1.34□□□□□ -2.19
RNU6-258P-201ENST00000390884 IRX5P78411 483 aaPredicted RBP1.34□□□□□ -2.19
RNU6-258P-201ENST00000390884 CCER1Q8TC90 406 aaPredicted RBP1.34□□□□□ -2.19
RNU6-258P-201ENST00000390884 MSTNO14793 375 aa1.33□□□□□ -2.2
RNU6-258P-201ENST00000390884 SLC4A2P04920 1241 aa1.33□□□□□ -2.2
RNU6-258P-201ENST00000390884 SLURP2P0DP57 97 aa1.33□□□□□ -2.2
RNU6-258P-201ENST00000390884 GSK3AP49840 483 aa1.33□□□□□ -2.2
RNU6-258P-201ENST00000390884 DPY19L2Q6NUT2 758 aa1.33□□□□□ -2.2
RNU6-258P-201ENST00000390884 GALNT6Q8NCL4 622 aa1.33□□□□□ -2.2
RNU6-258P-201ENST00000390884 KIF12Q96FN5 646 aa1.32□□□□□ -2.2
RNU6-258P-201ENST00000390884 ZSWIM6Q9HCJ5 1215 aa1.32□□□□□ -2.2
RNU6-258P-201ENST00000390884 TSPYL2Q9H2G4 693 aaPredicted RBP1.31□□□□□ -2.2
RNU6-258P-201ENST00000390884 CREBZFQ9NS37 354 aa1.31□□□□□ -2.2
RNU6-258P-201ENST00000390884 V9GY48 417 aaPredicted RBP1.31□□□□□ -2.2
RNU6-258P-201ENST00000390884 G3V3G9 751 aa1.3□□□□□ -2.2
RNU6-258P-201ENST00000390884 ITGBL1O95965 494 aaPredicted RBP1.3□□□□□ -2.2
RNU6-258P-201ENST00000390884 GMPRP36959 345 aa1.3□□□□□ -2.2
RNU6-258P-201ENST00000390884 KCNC4Q03721 635 aa1.3□□□□□ -2.2
RNU6-258P-201ENST00000390884 DCAF8Q5TAQ9 597 aa1.3□□□□□ -2.2
RNU6-258P-201ENST00000390884 NBPF11Q86T75 865 aa1.3□□□□□ -2.2
RNU6-258P-201ENST00000390884 GOLGA8CPA6NN73 597 aa1.29□□□□□ -2.2
RNU6-258P-201ENST00000390884 PAX4O43316 350 aa1.29□□□□□ -2.2
RNU6-258P-201ENST00000390884 IRF7Q92985 503 aa1.29□□□□□ -2.2
RNU6-258P-201ENST00000390884 AXIN2Q9Y2T1 843 aa1.29□□□□□ -2.2
RNU6-258P-201ENST00000390884 SCO2A0A1W2PP80 73 aa1.28□□□□□ -2.2
RNU6-258P-201ENST00000390884 ZNF316A6NFI3 1004 aaPredicted RBP1.28□□□□□ -2.2
RNU6-258P-201ENST00000390884 TK2O00142 265 aa1.28□□□□□ -2.2
RNU6-258P-201ENST00000390884 MAP3K13O43283 966 aa1.28□□□□□ -2.2
RNU6-258P-201ENST00000390884 TMEM106CQ9BVX2 250 aa1.28□□□□□ -2.2
RNU6-258P-201ENST00000390884 FAM187AA6NFU0 413 aa1.27□□□□□ -2.21
RNU6-258P-201ENST00000390884 THSD4Q6ZMP0 1018 aa1.27□□□□□ -2.21
RNU6-258P-201ENST00000390884 ST8SIA5O15466 376 aa1.26□□□□□ -2.21
RNU6-258P-201ENST00000390884 LCE2CQ5TA81 110 aa1.26□□□□□ -2.21
RNU6-258P-201ENST00000390884 KANK3Q6NY19 840 aa1.26□□□□□ -2.21
RNU6-258P-201ENST00000390884 GMPR2Q9P2T1 348 aaKnown RBP1.26□□□□□ -2.21
RNU6-258P-201ENST00000390884 CCDC61Q9Y6R9 512 aa1.26□□□□□ -2.21
RNU6-258P-201ENST00000390884 ARHGAP33O14559 1287 aa1.25□□□□□ -2.21
RNU6-258P-201ENST00000390884 HRO43593 1189 aa1.25□□□□□ -2.21
RNU6-258P-201ENST00000390884 IRS1P35568 1242 aa1.25□□□□□ -2.21
RNU6-258P-201ENST00000390884 LCE5AQ5TCM9 118 aa1.25□□□□□ -2.21
RNU6-258P-201ENST00000390884 SPOCK3Q9BQ16 436 aa1.25□□□□□ -2.21
RNU6-258P-201ENST00000390884 AAASQ9NRG9 546 aa1.25□□□□□ -2.21
RNU6-258P-201ENST00000390884 WBP1LQ9NX94 342 aa1.25□□□□□ -2.21
RNU6-258P-201ENST00000390884 ZMYM1Q5SVZ6 1142 aa1.24□□□□□ -2.21
RNU6-258P-201ENST00000390884 DMRTA1Q5VZB9 504 aa1.24□□□□□ -2.21
RNU6-258P-201ENST00000390884 AVENQ9NQS1 362 aaPredicted RBP1.24□□□□□ -2.21
RNU6-258P-201ENST00000390884 NPM3O75607 178 aaKnown RBP1.23□□□□□ -2.21
RNU6-258P-201ENST00000390884 MYCNP04198 464 aaPredicted RBP1.23□□□□□ -2.21
RNU6-258P-201ENST00000390884 GPR153Q6NV75 609 aa1.23□□□□□ -2.21
RNU6-258P-201ENST00000390884 WNT2BQ93097 391 aa1.23□□□□□ -2.21
RNU6-258P-201ENST00000390884 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.22□□□□□ -2.21
RNU6-258P-201ENST00000390884 PCDHB13Q9Y5F0 798 aa1.22□□□□□ -2.21
RNU6-258P-201ENST00000390884 ARSIQ5FYB1 569 aa1.21□□□□□ -2.22
RNU6-258P-201ENST00000390884 EHMT2Q96KQ7 1210 aa1.21□□□□□ -2.22
RNU6-258P-201ENST00000390884 KCNH8Q96L42 1107 aa1.21□□□□□ -2.22
RNU6-258P-201ENST00000390884 STAG3Q9UJ98 1225 aa1.21□□□□□ -2.22
RNU6-258P-201ENST00000390884 POTEEQ6S8J3 1075 aa1.2□□□□□ -2.22
RNU6-258P-201ENST00000390884 SGIP1Q9BQI5 828 aa1.2□□□□□ -2.22
RNU6-258P-201ENST00000390884 ZFP64Q9NPA5 681 aa1.2□□□□□ -2.22
RNU6-258P-201ENST00000390884 ADAMTS8Q9UP79 889 aa1.2□□□□□ -2.22
RNU6-258P-201ENST00000390884 AXIN1O15169 862 aa1.19□□□□□ -2.22
RNU6-258P-201ENST00000390884 FURINP09958 794 aa1.19□□□□□ -2.22
RNU6-258P-201ENST00000390884 MARSP56192 900 aaKnown RBP1.19□□□□□ -2.22
RNU6-258P-201ENST00000390884 GOLGA2Q08379 1002 aa1.19□□□□□ -2.22
RNU6-258P-201ENST00000390884 PLA2G4EQ3MJ16 856 aa1.19□□□□□ -2.22
RNU6-258P-201ENST00000390884 NYAP1Q6ZVC0 841 aa1.19□□□□□ -2.22
RNU6-258P-201ENST00000390884 SENP2Q9HC62 589 aa1.19□□□□□ -2.22
RNU6-258P-201ENST00000390884 NXF1Q9UBU9 619 aaKnown RBP1.19□□□□□ -2.22
RNU6-258P-201ENST00000390884 NPAS3Q8IXF0 933 aa1.18□□□□□ -2.22
RNU6-258P-201ENST00000390884 SCARF2Q96GP6 870 aaPredicted RBP1.18□□□□□ -2.22
RNU6-258P-201ENST00000390884 BAG6P46379 1132 aa1.17□□□□□ -2.22
RNU6-258P-201ENST00000390884 MKRN3Q13064 507 aaKnown RBP1.17□□□□□ -2.22
RNU6-258P-201ENST00000390884 MCTP1Q6DN14 999 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms