RNA–Protein interactions for RNA: ENST00000390454.2

TRAV25-201, Transcript of T cell receptor alpha variable 25, humanhuman

APPRIS P1 BASIC

Gene TRAV25, Length 403 nt, Biotype TR V gene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25-201ENST00000390454 PCDHB13Q9Y5F0 798 aa9.88□□□□□ -0.83
TRAV25-201ENST00000390454 MFSD10Q14728 455 aa9.87□□□□□ -0.83
TRAV25-201ENST00000390454 PIP4P2Q8N4L2 257 aa9.87□□□□□ -0.83
TRAV25-201ENST00000390454 DDRGK1Q96HY6 314 aa9.87□□□□□ -0.83
TRAV25-201ENST00000390454 NCKAP5LQ9HCH0 1330 aa9.86□□□□□ -0.83
TRAV25-201ENST00000390454 FBXO22Q8NEZ5 403 aa9.85□□□□□ -0.83
TRAV25-201ENST00000390454 TSPYL2Q9H2G4 693 aaPredicted RBP9.85□□□□□ -0.83
TRAV25-201ENST00000390454 ZNF579Q8NAF0 562 aaKnown RBP9.84□□□□□ -0.83
TRAV25-201ENST00000390454 FAM117AQ9C073 453 aa9.84□□□□□ -0.83
TRAV25-201ENST00000390454 EFCAB3Q8N7B9 438 aa9.83□□□□□ -0.84
TRAV25-201ENST00000390454 PHF8Q9UPP1 1060 aa9.82□□□□□ -0.84
TRAV25-201ENST00000390454 DCAF1Q9Y4B6 1507 aa9.82□□□□□ -0.84
TRAV25-201ENST00000390454 MLLT3P42568 568 aaPredicted RBP9.81□□□□□ -0.84
TRAV25-201ENST00000390454 CAMK2BQ13554 666 aa9.81□□□□□ -0.84
TRAV25-201ENST00000390454 CCDC82Q8N4S0 544 aa9.8□□□□□ -0.84
TRAV25-201ENST00000390454 A6NJR5 290 aa9.79□□□□□ -0.84
TRAV25-201ENST00000390454 SP7Q8TDD2 431 aaPredicted RBP9.79□□□□□ -0.84
TRAV25-201ENST00000390454 CRISPLD2Q9H0B8 497 aa9.79□□□□□ -0.84
TRAV25-201ENST00000390454 CABP2Q9NPB3 220 aa9.79□□□□□ -0.84
TRAV25-201ENST00000390454 MYO15BQ96JP2 1530 aa9.77□□□□□ -0.85
TRAV25-201ENST00000390454 TRAK2O60296 914 aa9.76□□□□□ -0.85
TRAV25-201ENST00000390454 NECTIN2Q92692 538 aa9.76□□□□□ -0.85
TRAV25-201ENST00000390454 MINK1Q8N4C8 1332 aaPredicted RBP9.76□□□□□ -0.85
TRAV25-201ENST00000390454 PLEKHG3A1L390 1219 aa9.75□□□□□ -0.85
TRAV25-201ENST00000390454 KCTD17Q8N5Z5 321 aa9.75□□□□□ -0.85
TRAV25-201ENST00000390454 GOPCQ9HD26 462 aa9.74□□□□□ -0.85
TRAV25-201ENST00000390454 PCGF6Q9BYE7 350 aa9.73□□□□□ -0.85
TRAV25-201ENST00000390454 SPDYE16A6NNV3 312 aaPredicted RBP9.72□□□□□ -0.85
TRAV25-201ENST00000390454 PRKAR2AP13861 404 aaKnown RBP9.72□□□□□ -0.85
TRAV25-201ENST00000390454 CLUAP1Q96AJ1 413 aa9.71□□□□□ -0.86
TRAV25-201ENST00000390454 TRAIPQ9BWF2 469 aa9.71□□□□□ -0.86
TRAV25-201ENST00000390454 MAP2K5Q13163 448 aa9.7□□□□□ -0.86
TRAV25-201ENST00000390454 PELP1Q8IZL8 1130 aaKnown RBP9.7□□□□□ -0.86
TRAV25-201ENST00000390454 PCMTD1Q96MG8 357 aaPredicted RBP9.7□□□□□ -0.86
TRAV25-201ENST00000390454 ONECUT3O60422 494 aaPredicted RBP9.69□□□□□ -0.86
TRAV25-201ENST00000390454 AMHR2Q16671 573 aa9.69□□□□□ -0.86
TRAV25-201ENST00000390454 CHADLQ6NUI6 762 aa9.68□□□□□ -0.86
TRAV25-201ENST00000390454 CCDC102AQ96A19 550 aa9.68□□□□□ -0.86
TRAV25-201ENST00000390454 CCDC97Q96F63 343 aaPredicted RBP9.68□□□□□ -0.86
TRAV25-201ENST00000390454 ZEB1P37275 1124 aaPredicted RBP9.67□□□□□ -0.86
TRAV25-201ENST00000390454 PARP9Q8IXQ6 854 aa9.67□□□□□ -0.86
TRAV25-201ENST00000390454 SERPINA10Q9UK55 444 aa9.67□□□□□ -0.86
TRAV25-201ENST00000390454 CCDC61Q9Y6R9 512 aa9.67□□□□□ -0.86
TRAV25-201ENST00000390454 RAD21O60216 631 aa9.66□□□□□ -0.86
TRAV25-201ENST00000390454 PPP1R15BQ5SWA1 713 aa9.66□□□□□ -0.86
TRAV25-201ENST00000390454 IFNL1Q8IU54 200 aa9.66□□□□□ -0.86
TRAV25-201ENST00000390454 DPYSL4O14531 572 aa9.65□□□□□ -0.86
TRAV25-201ENST00000390454 IRF6O14896 467 aa9.65□□□□□ -0.86
TRAV25-201ENST00000390454 PDIA6Q15084 440 aa9.65□□□□□ -0.86
TRAV25-201ENST00000390454 AEBP1Q8IUX7 1158 aa9.65□□□□□ -0.86
TRAV25-201ENST00000390454 GPR37O15354 613 aa9.64□□□□□ -0.87
TRAV25-201ENST00000390454 TTLL12Q14166 644 aaPredicted RBP9.64□□□□□ -0.87
TRAV25-201ENST00000390454 PAK3O75914 559 aaPredicted RBP9.63□□□□□ -0.87
TRAV25-201ENST00000390454 GOLGA2Q08379 1002 aa9.63□□□□□ -0.87
TRAV25-201ENST00000390454 PROSER2Q86WR7 435 aaPredicted RBP9.63□□□□□ -0.87
TRAV25-201ENST00000390454 NUTM2FA1L443 756 aa9.62□□□□□ -0.87
TRAV25-201ENST00000390454 MS4A4AQ96JQ5 239 aa9.62□□□□□ -0.87
TRAV25-201ENST00000390454 ZNF777Q9ULD5 760 aaPredicted RBP9.62□□□□□ -0.87
TRAV25-201ENST00000390454 MCM6Q14566 821 aa9.61□□□□□ -0.87
TRAV25-201ENST00000390454 HAX1O00165 279 aa9.6□□□□□ -0.87
TRAV25-201ENST00000390454 TMCO4Q5TGY1 634 aa9.6□□□□□ -0.87
TRAV25-201ENST00000390454 FARP1Q9Y4F1 1045 aaPredicted RBP9.6□□□□□ -0.87
TRAV25-201ENST00000390454 GNPATO15228 680 aa9.59□□□□□ -0.87
TRAV25-201ENST00000390454 GPHNQ9NQX3 736 aaPredicted RBP9.59□□□□□ -0.87
TRAV25-201ENST00000390454 MAP3K13O43283 966 aa9.56□□□□□ -0.88
TRAV25-201ENST00000390454 HIC1Q14526 733 aa9.56□□□□□ -0.88
TRAV25-201ENST00000390454 GRXCR2A6NFK2 248 aa9.55□□□□□ -0.88
TRAV25-201ENST00000390454 C19orf67A6NJJ6 358 aa9.55□□□□□ -0.88
TRAV25-201ENST00000390454 FCHSD2O94868 740 aa9.55□□□□□ -0.88
TRAV25-201ENST00000390454 EVX2Q03828 476 aa9.55□□□□□ -0.88
TRAV25-201ENST00000390454 EMILIN3Q9NT22 766 aa9.55□□□□□ -0.88
TRAV25-201ENST00000390454 ATP1B4Q9UN42 357 aaPredicted RBP9.55□□□□□ -0.88
TRAV25-201ENST00000390454 SH3D19Q5HYK7 790 aa9.54□□□□□ -0.88
TRAV25-201ENST00000390454 GIGYF2Q6Y7W6 1299 aaKnown RBP9.54□□□□□ -0.88
TRAV25-201ENST00000390454 PPARGC1BQ86YN6 1023 aaKnown RBP9.54□□□□□ -0.88
TRAV25-201ENST00000390454 PDE4CQ08493 712 aa9.53□□□□□ -0.88
TRAV25-201ENST00000390454 RGS22Q8NE09 1264 aa9.53□□□□□ -0.88
TRAV25-201ENST00000390454 KIF12Q96FN5 646 aa9.52□□□□□ -0.89
TRAV25-201ENST00000390454 MFAP1P55081 439 aaKnown RBP9.5□□□□□ -0.89
TRAV25-201ENST00000390454 FNBP4Q8N3X1 1017 aaPredicted RBP9.5□□□□□ -0.89
TRAV25-201ENST00000390454 RETREG2Q8NC44 543 aa9.5□□□□□ -0.89
TRAV25-201ENST00000390454 GZF1Q9H116 711 aaPredicted RBP9.5□□□□□ -0.89
TRAV25-201ENST00000390454 MTMR7Q9Y216 660 aa9.5□□□□□ -0.89
TRAV25-201ENST00000390454 MS4A1P11836 297 aa9.49□□□□□ -0.89
TRAV25-201ENST00000390454 PATL2C9JE40 543 aaKnown RBP9.48□□□□□ -0.89
TRAV25-201ENST00000390454 SKIV2LQ15477 1246 aaKnown RBP9.48□□□□□ -0.89
TRAV25-201ENST00000390454 LOC105371045A0A1W2PR82 267 aa9.47□□□□□ -0.89
TRAV25-201ENST00000390454 DSG2Q14126 1118 aa9.47□□□□□ -0.89
TRAV25-201ENST00000390454 TMC2Q8TDI7 906 aa9.47□□□□□ -0.89
TRAV25-201ENST00000390454 FBXW7Q969H0 707 aa9.47□□□□□ -0.89
TRAV25-201ENST00000390454 POM121Q96HA1 1249 aa9.47□□□□□ -0.89
TRAV25-201ENST00000390454 RBM25P49756 843 aaKnown RBP9.46□□□□□ -0.9
TRAV25-201ENST00000390454 MAP3K9P80192 1104 aa9.46□□□□□ -0.9
TRAV25-201ENST00000390454 PLSCR2Q9NRY7 297 aa9.46□□□□□ -0.9
TRAV25-201ENST00000390454 ACIN1Q9UKV3 1341 aaKnown RBP9.46□□□□□ -0.9
TRAV25-201ENST00000390454 PPP1R15AO75807 674 aaPredicted RBP9.45□□□□□ -0.9
TRAV25-201ENST00000390454 FECHP22830 423 aa9.45□□□□□ -0.9
TRAV25-201ENST00000390454 SPDYE5A6NIY4 337 aa9.44□□□□□ -0.9
TRAV25-201ENST00000390454 CLCN1P35523 988 aa9.44□□□□□ -0.9
TRAV25-201ENST00000390454 WWC1Q8IX03 1113 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms