RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 LSM11P83369 360 aaKnown RBP eCLIP2.3□□□□□ -2.04
SNORD28-201ENST00000384706 DOK7Q18PE1 504 aa2.3□□□□□ -2.04
SNORD28-201ENST00000384706 Q6ZNB5 142 aa2.3□□□□□ -2.04
SNORD28-201ENST00000384706 ANKRD13DQ6ZTN6 518 aa2.3□□□□□ -2.04
SNORD28-201ENST00000384706 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP2.28□□□□□ -2.04
SNORD28-201ENST00000384706 A0A0G2JS52 829 aa2.28□□□□□ -2.04
SNORD28-201ENST00000384706 TMEM92Q6UXU6 159 aa2.28□□□□□ -2.04
SNORD28-201ENST00000384706 MICALL2Q8IY33 904 aa2.28□□□□□ -2.04
SNORD28-201ENST00000384706 TRIM41Q8WV44 630 aa2.28□□□□□ -2.04
SNORD28-201ENST00000384706 ZFP91Q96JP5 570 aaPredicted RBP2.28□□□□□ -2.04
SNORD28-201ENST00000384706 PHF8Q9UPP1 1060 aa2.28□□□□□ -2.04
SNORD28-201ENST00000384706 RIOK3O14730 519 aaKnown RBP2.27□□□□□ -2.05
SNORD28-201ENST00000384706 SOX12O15370 315 aa2.27□□□□□ -2.05
SNORD28-201ENST00000384706 ARSIQ5FYB1 569 aa2.27□□□□□ -2.05
SNORD28-201ENST00000384706 GPR153Q6NV75 609 aa2.27□□□□□ -2.05
SNORD28-201ENST00000384706 ZSWIM6Q9HCJ5 1215 aa2.27□□□□□ -2.05
SNORD28-201ENST00000384706 VGFO15240 615 aaPredicted RBP2.26□□□□□ -2.05
SNORD28-201ENST00000384706 TRAF7Q6Q0C0 670 aa2.26□□□□□ -2.05
SNORD28-201ENST00000384706 KHSRPQ92945 711 aaKnown RBP eCLIP2.26□□□□□ -2.05
SNORD28-201ENST00000384706 RNF25Q96BH1 459 aaPredicted RBP2.26□□□□□ -2.05
SNORD28-201ENST00000384706 ZNF775Q96BV0 537 aaPredicted RBP2.26□□□□□ -2.05
SNORD28-201ENST00000384706 MS4A4AQ96JQ5 239 aa2.26□□□□□ -2.05
SNORD28-201ENST00000384706 NLRP6P59044 892 aa2.25□□□□□ -2.05
SNORD28-201ENST00000384706 POTEEQ6S8J3 1075 aa2.25□□□□□ -2.05
SNORD28-201ENST00000384706 BCL11BQ9C0K0 894 aaPredicted RBP2.25□□□□□ -2.05
SNORD28-201ENST00000384706 STK24Q9Y6E0 443 aa2.25□□□□□ -2.05
SNORD28-201ENST00000384706 ZNF316A6NFI3 1004 aaPredicted RBP2.24□□□□□ -2.05
SNORD28-201ENST00000384706 STK25O00506 426 aa2.23□□□□□ -2.05
SNORD28-201ENST00000384706 NUDT7P0C024 238 aa2.23□□□□□ -2.05
SNORD28-201ENST00000384706 PBX2P40425 430 aa2.23□□□□□ -2.05
SNORD28-201ENST00000384706 LAPTM4AQ15012 233 aa2.23□□□□□ -2.05
SNORD28-201ENST00000384706 FBXO22Q8NEZ5 403 aa2.23□□□□□ -2.05
SNORD28-201ENST00000384706 TAOK2Q9UL54 1235 aa2.23□□□□□ -2.05
SNORD28-201ENST00000384706 AXIN2Q9Y2T1 843 aa2.23□□□□□ -2.05
SNORD28-201ENST00000384706 C2orf72A6NCS6 295 aa2.22□□□□□ -2.05
SNORD28-201ENST00000384706 HRO43593 1189 aa2.22□□□□□ -2.05
SNORD28-201ENST00000384706 ECM2O94769 699 aaPredicted RBP2.22□□□□□ -2.05
SNORD28-201ENST00000384706 LCE2AQ5TA79 106 aaPredicted RBP2.22□□□□□ -2.05
SNORD28-201ENST00000384706 MFRPQ9BY79 579 aa2.22□□□□□ -2.05
SNORD28-201ENST00000384706 LHX6Q9UPM6 363 aa2.22□□□□□ -2.05
SNORD28-201ENST00000384706 KIF3CO14782 793 aa2.21□□□□□ -2.06
SNORD28-201ENST00000384706 TMC2Q8TDI7 906 aa2.21□□□□□ -2.06
SNORD28-201ENST00000384706 ZNF787Q6DD87 383 aa2.2□□□□□ -2.06
SNORD28-201ENST00000384706 ADGRD1Q6QNK2 874 aa2.2□□□□□ -2.06
SNORD28-201ENST00000384706 PCDHGA4Q9Y5G9 962 aa2.2□□□□□ -2.06
SNORD28-201ENST00000384706 ARHGAP33O14559 1287 aa2.19□□□□□ -2.06
SNORD28-201ENST00000384706 RGL2O15211 777 aa2.19□□□□□ -2.06
SNORD28-201ENST00000384706 PPP1R37O75864 691 aa2.19□□□□□ -2.06
SNORD28-201ENST00000384706 SLC34A2O95436 690 aa2.19□□□□□ -2.06
SNORD28-201ENST00000384706 STAC3Q96MF2 364 aa2.19□□□□□ -2.06
SNORD28-201ENST00000384706 PSDA5PKW4 1024 aaPredicted RBP2.18□□□□□ -2.06
SNORD28-201ENST00000384706 TK2O00142 265 aa2.18□□□□□ -2.06
SNORD28-201ENST00000384706 PSEN2P49810 448 aa2.18□□□□□ -2.06
SNORD28-201ENST00000384706 SUZ12Q15022 739 aaKnown RBP2.18□□□□□ -2.06
SNORD28-201ENST00000384706 KCTD12Q96CX2 325 aaKnown RBP2.18□□□□□ -2.06
SNORD28-201ENST00000384706 TBC1D12O60347 775 aa2.17□□□□□ -2.06
SNORD28-201ENST00000384706 PTPN5P54829 565 aa2.17□□□□□ -2.06
SNORD28-201ENST00000384706 PKD2Q13563 968 aa2.17□□□□□ -2.06
SNORD28-201ENST00000384706 DMRTA1Q5VZB9 504 aa2.17□□□□□ -2.06
SNORD28-201ENST00000384706 PLPP6Q8IY26 295 aa2.17□□□□□ -2.06
SNORD28-201ENST00000384706 PTCD2Q8WV60 388 aaKnown RBP2.17□□□□□ -2.06
SNORD28-201ENST00000384706 STK17AQ9UEE5 414 aa2.17□□□□□ -2.06
SNORD28-201ENST00000384706 GFRA3O60609 400 aa2.16□□□□□ -2.06
SNORD28-201ENST00000384706 FOXK1P85037 733 aa2.16□□□□□ -2.06
SNORD28-201ENST00000384706 DSG2Q14126 1118 aa2.16□□□□□ -2.06
SNORD28-201ENST00000384706 PPP4R3BQ5MIZ7 849 aa2.16□□□□□ -2.06
SNORD28-201ENST00000384706 TREML4Q6UXN2 200 aa2.16□□□□□ -2.06
SNORD28-201ENST00000384706 KCNH8Q96L42 1107 aa2.16□□□□□ -2.06
SNORD28-201ENST00000384706 KCNK17Q96T54 332 aa2.16□□□□□ -2.06
SNORD28-201ENST00000384706 GPHNQ9NQX3 736 aaPredicted RBP2.16□□□□□ -2.06
SNORD28-201ENST00000384706 KDM4FA0A1W2PPD8 638 aa2.15□□□□□ -2.07
SNORD28-201ENST00000384706 GOLGA8CPA6NN73 597 aa2.15□□□□□ -2.07
SNORD28-201ENST00000384706 NRG2O14511 850 aaPredicted RBP2.15□□□□□ -2.07
SNORD28-201ENST00000384706 ITGBL1O95965 494 aaPredicted RBP2.15□□□□□ -2.07
SNORD28-201ENST00000384706 CHGAP10645 457 aaKnown RBP2.15□□□□□ -2.07
SNORD28-201ENST00000384706 ZNF454Q8N9F8 522 aa2.15□□□□□ -2.07
SNORD28-201ENST00000384706 UPF1Q92900 1129 aaKnown RBP eCLIP2.15□□□□□ -2.07
SNORD28-201ENST00000384706 KRTAP4-8Q9BYQ9 185 aa2.15□□□□□ -2.07
SNORD28-201ENST00000384706 VPS9D1Q9Y2B5 631 aa2.14□□□□□ -2.07
SNORD28-201ENST00000384706 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.13□□□□□ -2.07
SNORD28-201ENST00000384706 HS6ST3Q8IZP7 471 aa2.13□□□□□ -2.07
SNORD28-201ENST00000384706 PTPREP23469 700 aa2.12□□□□□ -2.07
SNORD28-201ENST00000384706 PDE4AP27815 886 aa2.12□□□□□ -2.07
SNORD28-201ENST00000384706 MRPL50Q8N5N7 158 aaKnown RBP2.12□□□□□ -2.07
SNORD28-201ENST00000384706 OXER1Q8TDS5 423 aa2.12□□□□□ -2.07
SNORD28-201ENST00000384706 WNT2BQ93097 391 aa2.12□□□□□ -2.07
SNORD28-201ENST00000384706 KRTAP9-2Q9BYQ4 174 aa2.12□□□□□ -2.07
SNORD28-201ENST00000384706 BCL2L12Q9HB09 334 aa2.12□□□□□ -2.07
SNORD28-201ENST00000384706 BHMG1C9JSJ3 638 aaPredicted RBP2.11□□□□□ -2.07
SNORD28-201ENST00000384706 WIPF1O43516 503 aa2.11□□□□□ -2.07
SNORD28-201ENST00000384706 EVI5O60447 810 aa2.11□□□□□ -2.07
SNORD28-201ENST00000384706 FOSBP53539 338 aa2.11□□□□□ -2.07
SNORD28-201ENST00000384706 MAP3K9P80192 1104 aa2.11□□□□□ -2.07
SNORD28-201ENST00000384706 NKX1-1Q15270 411 aaPredicted RBP2.11□□□□□ -2.07
SNORD28-201ENST00000384706 PPP1R15BQ5SWA1 713 aa2.11□□□□□ -2.07
SNORD28-201ENST00000384706 THSD4Q6ZMP0 1018 aa2.11□□□□□ -2.07
SNORD28-201ENST00000384706 ZDHHC16Q969W1 377 aa2.11□□□□□ -2.07
SNORD28-201ENST00000384706 LARP6Q9BRS8 491 aaKnown RBP2.11□□□□□ -2.07
SNORD28-201ENST00000384706 ZBED2Q9BTP6 218 aa2.11□□□□□ -2.07
SNORD28-201ENST00000384706 SLC4A5Q9BY07 1137 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms